Gene annotation
Transcriptome id Sobic.006G108400.1
Synonym GRF7, GF14NU, Sb06g019100
Functional annotation 14-3-3 protein, putative, expressed
UniProt C5Y9W4
Pfam PF00244
Panther DB PTHR18860 PTHR18860:SF36
NCBI CDD KOG0841; Multifunctional chaperone (14-3-3 family)
KEGG Orthology K06630; 14-3-3 protein epsilon
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G02520 : general regulatory factor 7
RAP-DB (Rice) LOC_Os04g38870.4 : 14-3-3 protein, putative, expressed
MaizeGDB (Corn) Zm00025a011106 , Zm00025a056225
Brachypodium PNT61235 , KQJ98364 , KQJ98365 , KQK00042 , KQJ82997 , KQJ88264
Barley HORVU0Hr1G004990.1 , HORVU0Hr1G004990.2 , HORVU0Hr1G004990.3 , HORVU0Hr1G004990.4 , HORVU2Hr1G080630.7 , HORVU2Hr1G080630.6 , HORVU2Hr1G080630.5 , HORVU2Hr1G080630.4 , HORVU2Hr1G080630.3 , HORVU2Hr1G080630.2 , HORVU2Hr1G080630.1 , HORVU2Hr1G080630.8 , HORVU4Hr1G007370.1 , HORVU4Hr1G007370.3 , HORVU4Hr1G007370.2
Wheat TraesCS3D02G055500 , TraesCS3B02G068000 , TraesCS3B02G068000 , TraesCS3B02G068000 , TraesCS2B02G344600 , TraesCS2B02G344600 , TraesCS4D02G046400 , TraesCS4D02G046400 , TraesCS2A02G337300 , TraesCS2A02G337300 , TraesCS2D02G325600 , TraesCS2D02G325600 , TraesCS3A02G055600 , TraesCS3A02G055600 , TraesCS4B02G045500 , TraesCS4B02G045500 , TraesCS4A02G268700 , TraesCS4A02G268700
Populus -


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cDNA sequences
Sobic.006G108400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G049900 ubiquitin family protein, putative, expressed K08770: ubiquitin C
K08770: ubiquitin C
K04551: ubiquitin B
2 Sobic.003G253000 ubiquitin-conjugating enzyme, putative, expressed K10580: UBE2N, BLU, ubiquitin-conjugating enzyme E2 N
3 Sobic.008G161800 proteasome subunit, putative, expressed K03036: PSMD11, 26S proteasome regulatory subunit N6
4 Sobic.009G185800 translation initiation factor SUI1, putative, expressed K03113: EIF1, translation initiation factor 1
5 Sobic.001G415500 zinc finger, C3HC4 type domain containing protein, expressed K13125: nitric oxide synthase-interacting protein
6 Sobic.004G272800 VHS and GAT domain containing protein, expressed -
7 Sobic.001G459200 MYB family transcription factor, putative, expressed -
8 Sobic.004G050000 ubiquitin family protein, putative, expressed K08770: ubiquitin C
K08770: ubiquitin C
K04551: ubiquitin B
9 Sobic.002G267500 hydrolase, alpha/beta fold family domain containing protein, expressed -
10 Sobic.006G141500 expressed protein -
11 Sobic.009G043600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
12 Sobic.004G276100 expressed protein -
13 Sobic.001G048832 - -
14 Sobic.010G121300 nitrate-induced NOI protein, putative, expressed -
15 Sobic.003G181500 ZOS1-09 - C2H2 zinc finger protein, expressed -
16 Sobic.001G281400 expressed protein -
17 Sobic.001G022900 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K02639: ferredoxin
18 Sobic.001G132100 expressed protein -
19 Sobic.002G282400 expressed protein -
20 Sobic.001G288800 nonsense-mediated mRNA decay protein 3, putative, expressed K07562: nonsense-mediated mRNA decay protein 3


Gene co-expression network
sample Sobic006G108400 Sobic006G108400 Sobic004G049900 Sobic004G049900 Sobic006G108400--Sobic004G049900 Sobic003G253000 Sobic003G253000 Sobic006G108400--Sobic003G253000 Sobic008G161800 Sobic008G161800 Sobic006G108400--Sobic008G161800 Sobic009G185800 Sobic009G185800 Sobic006G108400--Sobic009G185800 Sobic001G415500 Sobic001G415500 Sobic006G108400--Sobic001G415500 Sobic004G272800 Sobic004G272800 Sobic006G108400--Sobic004G272800 Sobic001G459200 Sobic001G459200 Sobic006G108400--Sobic001G459200 Sobic004G050000 Sobic004G050000 Sobic006G108400--Sobic004G050000 Sobic002G267500 Sobic002G267500 Sobic006G108400--Sobic002G267500 Sobic004G049900--Sobic003G253000 Sobic004G049900--Sobic009G185800 Sobic004G049900--Sobic006G108400 Sobic003G130800 Sobic003G130800 Sobic004G049900--Sobic003G130800 Sobic004G049900--Sobic001G459200 Sobic004G049900--Sobic004G050000 Sobic004G049900--Sobic001G415500 Sobic004G049900--Sobic002G267500 Sobic001G281400 Sobic001G281400 Sobic004G049900--Sobic001G281400 Sobic006G141500 Sobic006G141500 Sobic003G253000--Sobic006G141500 Sobic003G253000--Sobic004G049900 Sobic003G253000--Sobic002G267500 Sobic003G253000--Sobic004G272800 Sobic003G253000--Sobic001G459200 Sobic002G345300 Sobic002G345300 Sobic003G253000--Sobic002G345300 Sobic002G046100 Sobic002G046100 Sobic003G253000--Sobic002G046100 Sobic003G253000--Sobic009G185800 Sobic003G253000--Sobic006G108400 Sobic002G263800 Sobic002G263800 Sobic008G161800--Sobic002G263800 Sobic008G161800--Sobic006G141500 Sobic008G161800--Sobic001G415500 Sobic008G161800--Sobic003G253000 Sobic008G161800--Sobic006G108400 Sobic007G095400 Sobic007G095400 Sobic008G161800--Sobic007G095400 Sobic010G154700 Sobic010G154700 Sobic008G161800--Sobic010G154700 Sobic001G132100 Sobic001G132100 Sobic008G161800--Sobic001G132100 Sobic004G248800 Sobic004G248800 Sobic008G161800--Sobic004G248800 Sobic009G185800--Sobic001G459200 Sobic009G185800--Sobic004G049900 Sobic009G185800--Sobic003G253000 Sobic009G185800--Sobic003G130800 Sobic009G185800--Sobic006G108400 Sobic003G350300 Sobic003G350300 Sobic009G185800--Sobic003G350300 Sobic004G330700 Sobic004G330700 Sobic009G185800--Sobic004G330700 Sobic009G185800--Sobic004G272800 Sobic003G181500 Sobic003G181500 Sobic009G185800--Sobic003G181500 Sobic001G007200 Sobic001G007200 Sobic001G415500--Sobic001G007200 Sobic001G415500--Sobic008G161800 Sobic001G415500--Sobic003G253000 Sobic009G146100 Sobic009G146100 Sobic001G415500--Sobic009G146100 Sobic001G415500--Sobic006G108400 Sobic001G415500--Sobic006G141500 Sobic001G415500--Sobic004G049900 Sobic004G293700 Sobic004G293700 Sobic001G415500--Sobic004G293700 Sobic010G121300 Sobic010G121300 Sobic001G415500--Sobic010G121300 Sobic004G272800--Sobic002G267500 Sobic004G272800--Sobic001G281400 Sobic004G272800--Sobic003G253000 Sobic001G048832 Sobic001G048832 Sobic004G272800--Sobic001G048832 Sobic002G190900 Sobic002G190900 Sobic004G272800--Sobic002G190900 Sobic004G272800--Sobic002G345300 Sobic004G272800--Sobic002G046100 Sobic010G041600 Sobic010G041600 Sobic004G272800--Sobic010G041600 Sobic005G188100 Sobic005G188100 Sobic004G272800--Sobic005G188100 Sobic001G459200--Sobic009G185800 Sobic001G459200--Sobic003G253000 Sobic001G499300 Sobic001G499300 Sobic001G459200--Sobic001G499300 Sobic004G055200 Sobic004G055200 Sobic001G459200--Sobic004G055200 Sobic001G459200--Sobic002G267500 Sobic001G459200--Sobic002G046100 Sobic001G459200--Sobic004G272800 Sobic001G459200--Sobic003G181500 Sobic001G459200--Sobic003G130800 Sobic009G043600 Sobic009G043600 Sobic004G050000--Sobic009G043600 Sobic001G066000 Sobic001G066000 Sobic004G050000--Sobic001G066000 Sobic004G050000--Sobic004G049900 Sobic004G277000 Sobic004G277000 Sobic004G050000--Sobic004G277000 Sobic004G050000--Sobic002G267500 Sobic006G121500 Sobic006G121500 Sobic004G050000--Sobic006G121500 Sobic002G090200 Sobic002G090200 Sobic004G050000--Sobic002G090200 Sobic009G177800 Sobic009G177800 Sobic004G050000--Sobic009G177800 Sobic004G050000--Sobic006G108400 Sobic002G267500--Sobic001G281400 Sobic002G267500--Sobic004G272800 Sobic002G267500--Sobic002G046100 Sobic002G267500--Sobic003G253000 Sobic010G149300 Sobic010G149300 Sobic002G267500--Sobic010G149300 Sobic002G267500--Sobic002G345300 Sobic002G267500--Sobic001G459200 Sobic009G143400 Sobic009G143400 Sobic002G267500--Sobic009G143400 Sobic006G173900 Sobic006G173900 Sobic002G267500--Sobic006G173900
Octagon: transcription factors


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