Gene annotation
Transcriptome id Sobic.005G043900.2,Sobic.005G043900.3
Synonym CRK23
Functional annotation protein kinase domain containing protein, expressed
UniProt A0A1Z5RGU2 , A0A1Z5RGP6
Pfam PF00069 PF07714
Panther DB PTHR27002 PTHR27002:SF153
NCBI CDD KOG1187; Serine/threonine protein kinase KOG2345Serine/threonine protein kinase/TGF-beta stimulated factor
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G23310 : cysteine-rich RLK (RECEPTOR-like protein kinase) 23,Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os11g10640.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G203200 hypothetical protein -
2 Sobic.006G246600 DUF538 domain containing protein, putative, expressed -
3 Sobic.005G043600 coatomer subunit beta, putative, expressed K17302: COPB2, coatomer subunit beta'
4 Sobic.008G048900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@citrate-binding protein precursor, putative, expressed -
5 Sobic.002G089100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF538 domain containing protein, putative, expressed -
6 Sobic.002G088900 DUF538 domain containing protein, putative, expressed -
7 Sobic.006G091700 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
8 Sobic.008G074400 glutathione S-transferase, putative, expressed K01800: maiA, maleylacetoacetate isomerase
9 Sobic.001G316400 heavy metal-associated domain containing protein, expressed -
10 Sobic.006G181300 Polyphenol oxidas(PubMedID : 28818380)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@polyphenol oxidase, putative, expressed K00422: polyphenol oxidase
11 Sobic.001G354400 O-methyltransferase, putative, expressed -
12 Sobic.002G098200 expressed protein -
13 Sobic.002G058200 SAM dependent carboxyl methyltransferase, putative, expressed -
14 Sobic.009G114000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Os5bglu22 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed K01188: beta-glucosidase
15 Sobic.002G013000 DUF538 domain containing protein, putative, expressed -
16 Sobic.002G085300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
17 Sobic.002G122800 expressed protein -
18 Sobic.007G198500 BTB/POZ domain containing protein, expressed K10523: speckle-type POZ protein
19 Sobic.004G226400 expressed protein -
20 Sobic.003G278000 expressed protein -


Gene co-expression network
sample Sobic005G043900 Sobic005G043900 Sobic003G203200 Sobic003G203200 Sobic005G043900--Sobic003G203200 Sobic006G246600 Sobic006G246600 Sobic005G043900--Sobic006G246600 Sobic005G043600 Sobic005G043600 Sobic005G043900--Sobic005G043600 Sobic008G048900 Sobic008G048900 Sobic005G043900--Sobic008G048900 Sobic002G089100 Sobic002G089100 Sobic005G043900--Sobic002G089100 Sobic002G088900 Sobic002G088900 Sobic005G043900--Sobic002G088900 Sobic006G091700 Sobic006G091700 Sobic005G043900--Sobic006G091700 Sobic008G074400 Sobic008G074400 Sobic005G043900--Sobic008G074400 Sobic001G316400 Sobic001G316400 Sobic005G043900--Sobic001G316400 Sobic002G122800 Sobic002G122800 Sobic003G203200--Sobic002G122800 Sobic001G354400 Sobic001G354400 Sobic003G203200--Sobic001G354400 Sobic003G203200--Sobic001G316400 Sobic003G203200--Sobic005G043900 Sobic009G114000 Sobic009G114000 Sobic003G203200--Sobic009G114000 Sobic003G203200--Sobic006G091700 Sobic002G085300 Sobic002G085300 Sobic003G203200--Sobic002G085300 Sobic006G181300 Sobic006G181300 Sobic003G203200--Sobic006G181300 Sobic003G203200--Sobic006G246600 Sobic002G013000 Sobic002G013000 Sobic006G246600--Sobic002G013000 Sobic006G246600--Sobic002G089100 Sobic006G246600--Sobic005G043900 Sobic003G204501 Sobic003G204501 Sobic006G246600--Sobic003G204501 Sobic006G246600--Sobic003G203200 Sobic006G246600--Sobic002G088900 Sobic006G246600--Sobic001G316400 Sobic006G246600--Sobic001G354400 Sobic006G246600--Sobic008G048900 Sobic007G198500 Sobic007G198500 Sobic005G043600--Sobic007G198500 Sobic002G058200 Sobic002G058200 Sobic005G043600--Sobic002G058200 Sobic005G043600--Sobic005G043900 Sobic008G175032 Sobic008G175032 Sobic005G043600--Sobic008G175032 Sobic002G098200 Sobic002G098200 Sobic005G043600--Sobic002G098200 Sobic005G043600--Sobic008G048900 Sobic005G043600--Sobic003G203200 Sobic001G359500 Sobic001G359500 Sobic005G043600--Sobic001G359500 Sobic001G247550 Sobic001G247550 Sobic005G043600--Sobic001G247550 Sobic008G048900--Sobic001G247550 Sobic008G048900--Sobic006G246600 Sobic008G048900--Sobic007G198500 Sobic008G048900--Sobic005G043600 Sobic008G048900--Sobic005G043900 Sobic008G048900--Sobic001G354400 Sobic008G048900--Sobic003G203200 Sobic002G089100--Sobic002G013000 Sobic004G008800 Sobic004G008800 Sobic002G089100--Sobic004G008800 Sobic002G089100--Sobic002G088900 Sobic002G089100--Sobic006G246600 Sobic002G089100--Sobic003G204501 Sobic002G089100--Sobic005G043900 Sobic002G089100--Sobic001G316400 Sobic002G089100--Sobic003G203200 Sobic003G188100 Sobic003G188100 Sobic002G089100--Sobic003G188100 Sobic002G088900--Sobic002G013000 Sobic002G088900--Sobic002G089100 Sobic002G088900--Sobic003G204501 Sobic002G088900--Sobic004G008800 Sobic002G088900--Sobic006G246600 Sobic004G106900 Sobic004G106900 Sobic002G088900--Sobic004G106900 Sobic002G088900--Sobic005G043900 Sobic003G149200 Sobic003G149200 Sobic002G088900--Sobic003G149200 Sobic002G088900--Sobic002G085300 Sobic006G091700--Sobic009G114000 Sobic003G087200 Sobic003G087200 Sobic006G091700--Sobic003G087200 Sobic001G150600 Sobic001G150600 Sobic006G091700--Sobic001G150600 Sobic006G091700--Sobic002G085300 Sobic001G015500 Sobic001G015500 Sobic006G091700--Sobic001G015500 Sobic008G153400 Sobic008G153400 Sobic006G091700--Sobic008G153400 Sobic006G030700 Sobic006G030700 Sobic006G091700--Sobic006G030700 Sobic006G199000 Sobic006G199000 Sobic006G091700--Sobic006G199000 Sobic001G069900 Sobic001G069900 Sobic006G091700--Sobic001G069900 Sobic008G074400--Sobic001G316400 Sobic004G225100 Sobic004G225100 Sobic008G074400--Sobic004G225100 Sobic008G074400--Sobic001G069900 Sobic008G074400--Sobic006G181300 Sobic002G338100 Sobic002G338100 Sobic008G074400--Sobic002G338100 Sobic002G087800 Sobic002G087800 Sobic008G074400--Sobic002G087800 Sobic008G074400--Sobic001G359500 Sobic008G074400--Sobic006G091700 Sobic001G504900 Sobic001G504900 Sobic008G074400--Sobic001G504900 Sobic001G316400--Sobic003G203200 Sobic001G316400--Sobic002G122800 Sobic001G316400--Sobic008G074400 Sobic001G316400--Sobic006G181300 Sobic001G316400--Sobic001G504900 Sobic001G316400--Sobic002G085300 Sobic001G316400--Sobic009G114000 Sobic001G316400--Sobic006G091700 Sobic001G316400--Sobic001G354400
Octagon: transcription factors


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