Gene annotation
Transcriptome id Sobic.008G048900.1
Synonym Sb08g004150
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
citrate-binding protein precursor, putative, expressed
UniProt A0A1Z5R5F0
Pfam PF08787
Panther DB PTHR33681 PTHR33681:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os12g06900.1 : citrate-binding protein precursor, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQJ92113
Barley HORVU3Hr1G020030.2 , HORVU3Hr1G020030.1 , HORVU3Hr1G020010.1 , HORVU3Hr1G020010.2 , HORVU3Hr1G020010.3 , HORVU3Hr1G020080.1
Wheat TraesCS3D02G112500 , TraesCS4A02G425400 , TraesCS7B02G109400 , TraesCS7A02G063000 , TraesCS3A02G110600 , TraesCS7A02G063100 , TraesCS7D02G057900 , TraesCS7D02G057700 , TraesCS3A02G110700 , TraesCS3A02G110500 , TraesCS4A02G425500 , TraesCS3B02G129600 , TraesCS2B02G088200 , TraesCS7A02G062900 , TraesCS3D02G112600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G247550 - -
2 Sobic.001G247550 - -
3 Sobic.001G247550 - -
4 Sobic.006G246600 DUF538 domain containing protein, putative, expressed -
5 Sobic.007G198500 BTB/POZ domain containing protein, expressed K10523: speckle-type POZ protein
6 Sobic.005G043600 coatomer subunit beta, putative, expressed K17302: COPB2, coatomer subunit beta'
7 Sobic.005G043900 protein kinase domain containing protein, expressed -
8 Sobic.001G354400 O-methyltransferase, putative, expressed -
9 Sobic.003G203200 hypothetical protein -
10 Sobic.008G091614 - -
11 Sobic.010G057200 - -
12 Sobic.001G266700 - -
13 Sobic.008G048800 citrate-binding protein precursor, putative, expressed -
14 Sobic.002G011700 expressed protein -
15 Sobic.009G023501 - -
16 Sobic.004G226100 RIPER1 - Ripening-related family protein precursor, expressed -
17 Sobic.001G316400 heavy metal-associated domain containing protein, expressed -
18 Sobic.002G089100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF538 domain containing protein, putative, expressed -
19 Sobic.009G012100 CHIT4 - Chitinase family protein precursor, expressed K01183: chitinase
20 Sobic.004G105700 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic008G048900 Sobic008G048900 Sobic001G247550 Sobic001G247550 Sobic008G048900--Sobic001G247550 Sobic006G246600 Sobic006G246600 Sobic008G048900--Sobic006G246600 Sobic007G198500 Sobic007G198500 Sobic008G048900--Sobic007G198500 Sobic005G043600 Sobic005G043600 Sobic008G048900--Sobic005G043600 Sobic005G043900 Sobic005G043900 Sobic008G048900--Sobic005G043900 Sobic001G354400 Sobic001G354400 Sobic008G048900--Sobic001G354400 Sobic003G203200 Sobic003G203200 Sobic008G048900--Sobic003G203200 Sobic001G247550--Sobic001G247550 Sobic001G247550--Sobic008G048900 Sobic008G091614 Sobic008G091614 Sobic001G247550--Sobic008G091614 Sobic002G011700 Sobic002G011700 Sobic001G247550--Sobic002G011700 Sobic001G247550--Sobic005G043600 Sobic001G247550--Sobic007G198500 Sobic010G057200 Sobic010G057200 Sobic001G247550--Sobic010G057200 Sobic009G023501 Sobic009G023501 Sobic001G247550--Sobic009G023501 Sobic002G013000 Sobic002G013000 Sobic006G246600--Sobic002G013000 Sobic002G089100 Sobic002G089100 Sobic006G246600--Sobic002G089100 Sobic006G246600--Sobic005G043900 Sobic003G204501 Sobic003G204501 Sobic006G246600--Sobic003G204501 Sobic006G246600--Sobic003G203200 Sobic002G088900 Sobic002G088900 Sobic006G246600--Sobic002G088900 Sobic001G316400 Sobic001G316400 Sobic006G246600--Sobic001G316400 Sobic006G246600--Sobic001G354400 Sobic006G246600--Sobic008G048900 Sobic007G198500--Sobic005G043600 Sobic007G198500--Sobic008G048900 Sobic008G175032 Sobic008G175032 Sobic007G198500--Sobic008G175032 Sobic001G359500 Sobic001G359500 Sobic007G198500--Sobic001G359500 Sobic007G198500--Sobic001G247550 Sobic007G198500--Sobic003G203200 Sobic007G198500--Sobic005G043900 Sobic005G043600--Sobic007G198500 Sobic002G058200 Sobic002G058200 Sobic005G043600--Sobic002G058200 Sobic005G043600--Sobic005G043900 Sobic005G043600--Sobic008G175032 Sobic002G098200 Sobic002G098200 Sobic005G043600--Sobic002G098200 Sobic005G043600--Sobic008G048900 Sobic005G043600--Sobic003G203200 Sobic005G043600--Sobic001G359500 Sobic005G043600--Sobic001G247550 Sobic005G043900--Sobic003G203200 Sobic005G043900--Sobic006G246600 Sobic005G043900--Sobic005G043600 Sobic005G043900--Sobic008G048900 Sobic005G043900--Sobic002G089100 Sobic005G043900--Sobic002G088900 Sobic006G091700 Sobic006G091700 Sobic005G043900--Sobic006G091700 Sobic008G074400 Sobic008G074400 Sobic005G043900--Sobic008G074400 Sobic005G043900--Sobic001G316400 Sobic001G354400--Sobic003G203200 Sobic002G122800 Sobic002G122800 Sobic001G354400--Sobic002G122800 Sobic001G354400--Sobic001G316400 Sobic006G181300 Sobic006G181300 Sobic001G354400--Sobic006G181300 Sobic001G354400--Sobic006G246600 Sobic004G226100 Sobic004G226100 Sobic001G354400--Sobic004G226100 Sobic005G169400 Sobic005G169400 Sobic001G354400--Sobic005G169400 Sobic009G114000 Sobic009G114000 Sobic001G354400--Sobic009G114000 Sobic001G354400--Sobic008G048900 Sobic003G203200--Sobic002G122800 Sobic003G203200--Sobic001G354400 Sobic003G203200--Sobic001G316400 Sobic003G203200--Sobic005G043900 Sobic003G203200--Sobic009G114000 Sobic003G203200--Sobic006G091700 Sobic002G085300 Sobic002G085300 Sobic003G203200--Sobic002G085300 Sobic003G203200--Sobic006G181300 Sobic003G203200--Sobic006G246600
Octagon: transcription factors


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