Gene annotation
Transcriptome id Sobic.008G048800.1
Synonym Sb08g004140
Functional annotation citrate-binding protein precursor, putative, expressed
UniProt C5YSB5
Pfam PF08787
Panther DB PTHR33681 PTHR33681:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os12g06900.1 : citrate-binding protein precursor, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQJ92113
Barley HORVU3Hr1G020030.2 , HORVU3Hr1G020030.1 , HORVU3Hr1G020010.1 , HORVU3Hr1G020010.2 , HORVU3Hr1G020010.3 , HORVU3Hr1G020080.1
Wheat TraesCS3D02G112500 , TraesCS4A02G425400 , TraesCS3A02G110600 , TraesCS7A02G063100 , TraesCS7D02G057900 , TraesCS7A02G063000 , TraesCS7D02G057700 , TraesCS7D02G057800 , TraesCS3A02G110700 , TraesCS3A02G110500 , TraesCS4A02G425500 , TraesCS3B02G129600 , TraesCS7A02G062900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G316400 heavy metal-associated domain containing protein, expressed -
2 Sobic.003G203200 hypothetical protein -
3 Sobic.001G354400 O-methyltransferase, putative, expressed -
4 Sobic.002G130000 dehydrodolichyl diphosphate synthase, putative, expressed K11778: DHDDS, RER2, ditrans,polycis-polyprenyl diphosphate synthase
5 Sobic.005G221000 hypothetical protein -
6 Sobic.008G048900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@citrate-binding protein precursor, putative, expressed -
7 Sobic.006G181300 Polyphenol oxidas(PubMedID : 28818380)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@polyphenol oxidase, putative, expressed K00422: polyphenol oxidase
8 Sobic.007G034000 expressed protein -
9 Sobic.008G074400 glutathione S-transferase, putative, expressed K01800: maiA, maleylacetoacetate isomerase
10 Sobic.002G210800 hypothetical protein -
11 Sobic.006G082000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsSub41 - Putative Subtilisin homologue, expressed -
12 Sobic.004G063400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@GDU1, putative, expressed -
13 Sobic.004G226100 RIPER1 - Ripening-related family protein precursor, expressed -
14 Sobic.002G122800 expressed protein -
15 Sobic.008G009200 SAG20, putative, expressed -
16 Sobic.007G198500 BTB/POZ domain containing protein, expressed K10523: speckle-type POZ protein
17 Sobic.006G246600 DUF538 domain containing protein, putative, expressed -
18 Sobic.001G469500 transporter family protein, putative, expressed -
19 Sobic.001G069900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase
20 Sobic.005G043600 coatomer subunit beta, putative, expressed K17302: COPB2, coatomer subunit beta'


Gene co-expression network
sample Sobic008G048800 Sobic008G048800 Sobic001G316400 Sobic001G316400 Sobic008G048800--Sobic001G316400 Sobic003G203200 Sobic003G203200 Sobic008G048800--Sobic003G203200 Sobic001G354400 Sobic001G354400 Sobic008G048800--Sobic001G354400 Sobic002G130000 Sobic002G130000 Sobic008G048800--Sobic002G130000 Sobic005G221000 Sobic005G221000 Sobic008G048800--Sobic005G221000 Sobic008G048900 Sobic008G048900 Sobic008G048800--Sobic008G048900 Sobic006G181300 Sobic006G181300 Sobic008G048800--Sobic006G181300 Sobic007G034000 Sobic007G034000 Sobic008G048800--Sobic007G034000 Sobic008G074400 Sobic008G074400 Sobic008G048800--Sobic008G074400 Sobic001G316400--Sobic003G203200 Sobic002G122800 Sobic002G122800 Sobic001G316400--Sobic002G122800 Sobic001G316400--Sobic008G074400 Sobic001G316400--Sobic006G181300 Sobic001G504900 Sobic001G504900 Sobic001G316400--Sobic001G504900 Sobic002G085300 Sobic002G085300 Sobic001G316400--Sobic002G085300 Sobic009G114000 Sobic009G114000 Sobic001G316400--Sobic009G114000 Sobic006G091700 Sobic006G091700 Sobic001G316400--Sobic006G091700 Sobic001G316400--Sobic001G354400 Sobic003G203200--Sobic002G122800 Sobic003G203200--Sobic001G354400 Sobic003G203200--Sobic001G316400 Sobic005G043900 Sobic005G043900 Sobic003G203200--Sobic005G043900 Sobic003G203200--Sobic009G114000 Sobic003G203200--Sobic006G091700 Sobic003G203200--Sobic002G085300 Sobic003G203200--Sobic006G181300 Sobic006G246600 Sobic006G246600 Sobic003G203200--Sobic006G246600 Sobic001G354400--Sobic003G203200 Sobic001G354400--Sobic002G122800 Sobic001G354400--Sobic001G316400 Sobic001G354400--Sobic006G181300 Sobic001G354400--Sobic006G246600 Sobic004G226100 Sobic004G226100 Sobic001G354400--Sobic004G226100 Sobic005G169400 Sobic005G169400 Sobic001G354400--Sobic005G169400 Sobic001G354400--Sobic009G114000 Sobic001G354400--Sobic008G048900 Sobic004G063400 Sobic004G063400 Sobic002G130000--Sobic004G063400 Sobic002G130000--Sobic001G504900 Sobic009G034700 Sobic009G034700 Sobic002G130000--Sobic009G034700 Sobic010G192800 Sobic010G192800 Sobic002G130000--Sobic010G192800 Sobic009G207600 Sobic009G207600 Sobic002G130000--Sobic009G207600 Sobic004G193000 Sobic004G193000 Sobic002G130000--Sobic004G193000 Sobic005G178100 Sobic005G178100 Sobic002G130000--Sobic005G178100 Sobic001G469500 Sobic001G469500 Sobic002G130000--Sobic001G469500 Sobic002G130000--Sobic006G181300 Sobic002G210800 Sobic002G210800 Sobic005G221000--Sobic002G210800 Sobic010G212350 Sobic010G212350 Sobic005G221000--Sobic010G212350 Sobic005G221000--Sobic007G034000 Sobic001G069900 Sobic001G069900 Sobic005G221000--Sobic001G069900 Sobic005G221000--Sobic006G181300 Sobic003G315500 Sobic003G315500 Sobic005G221000--Sobic003G315500 Sobic009G120200 Sobic009G120200 Sobic005G221000--Sobic009G120200 Sobic005G221000--Sobic001G316400 Sobic001G150650 Sobic001G150650 Sobic005G221000--Sobic001G150650 Sobic001G247550 Sobic001G247550 Sobic008G048900--Sobic001G247550 Sobic008G048900--Sobic006G246600 Sobic007G198500 Sobic007G198500 Sobic008G048900--Sobic007G198500 Sobic005G043600 Sobic005G043600 Sobic008G048900--Sobic005G043600 Sobic008G048900--Sobic005G043900 Sobic008G048900--Sobic001G354400 Sobic008G048900--Sobic003G203200 Sobic006G181300--Sobic001G069900 Sobic003G087200 Sobic003G087200 Sobic006G181300--Sobic003G087200 Sobic006G181300--Sobic009G114000 Sobic006G181300--Sobic006G091700 Sobic004G321800 Sobic004G321800 Sobic006G181300--Sobic004G321800 Sobic006G181300--Sobic009G207600 Sobic001G015500 Sobic001G015500 Sobic006G181300--Sobic001G015500 Sobic008G079300 Sobic008G079300 Sobic006G181300--Sobic008G079300 Sobic001G150600 Sobic001G150600 Sobic006G181300--Sobic001G150600 Sobic007G092700 Sobic007G092700 Sobic007G034000--Sobic007G092700 Sobic007G034000--Sobic006G181300 Sobic007G034000--Sobic002G210800 Sobic001G359500 Sobic001G359500 Sobic007G034000--Sobic001G359500 Sobic007G034000--Sobic001G069900 Sobic006G082000 Sobic006G082000 Sobic007G034000--Sobic006G082000 Sobic007G034000--Sobic005G221000 Sobic007G034000--Sobic001G015500 Sobic007G034000--Sobic001G504900 Sobic008G074400--Sobic001G316400 Sobic004G225100 Sobic004G225100 Sobic008G074400--Sobic004G225100 Sobic008G074400--Sobic001G069900 Sobic008G074400--Sobic006G181300 Sobic002G338100 Sobic002G338100 Sobic008G074400--Sobic002G338100 Sobic002G087800 Sobic002G087800 Sobic008G074400--Sobic002G087800 Sobic008G074400--Sobic001G359500 Sobic008G074400--Sobic006G091700 Sobic008G074400--Sobic001G504900
Octagon: transcription factors


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