Gene annotation
Transcriptome id Sobic.008G009200.1
Synonym
Functional annotation SAG20, putative, expressed
UniProt A0A1B6PAI4
Pfam PF04749 PF11204
Panther DB PTHR31045 PTHR31045:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G05350 : PLAC8 family protein
RAP-DB (Rice) LOC_Os11g01850.2 : SAG20, putative, expressed
MaizeGDB (Corn) Zm00025a043484 , Zm00025a053668 , Zm00025a053667
Brachypodium -
Barley HORVU5Hr1G047230.1
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G009100 SAG20, putative, expressed -
2 Sobic.001G469500 transporter family protein, putative, expressed -
3 Sobic.010G044700 leucine zipper protein-like, putative, expressed -
4 Sobic.005G171500 expressed protein -
5 Sobic.001G354400 O-methyltransferase, putative, expressed -
6 Sobic.005G217200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
7 Sobic.003G244600 similar to PRm 3(PubMedID : 29862293)@glycosyl hydrolase, putative, expressed K01183: chitinase
8 Sobic.002G035200 transporter family protein, putative, expressed K08150: SLC2A13, MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13
9 Sobic.002G122800 expressed protein -
10 Sobic.005G169400 WIP5 - Wound-induced protein precursor, expressed -
11 Sobic.001G145700 thaumatin, putative, expressed -
12 Sobic.006G181300 Polyphenol oxidas(PubMedID : 28818380)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@polyphenol oxidase, putative, expressed K00422: polyphenol oxidase
13 Sobic.002G023300 SCP-like extracellular protein, expressed K13449: pathogenesis-related protein 1
14 Sobic.002G024400 OsSCP28 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
15 Sobic.003G203200 hypothetical protein -
16 Sobic.009G012900 leucine rich repeat protein, putative, expressed -
17 Sobic.003G228400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450 72A1, putative, expressed -
18 Sobic.003G111300 PIII1 - Proteinase inhibitor II family protein precursor, expressed -
19 Sobic.003G422600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid permease family protein, putative, expressed -
20 Sobic.007G001100 DTA2, putative, expressed -


Gene co-expression network
sample Sobic008G009200 Sobic008G009200 Sobic008G009100 Sobic008G009100 Sobic008G009200--Sobic008G009100 Sobic001G469500 Sobic001G469500 Sobic008G009200--Sobic001G469500 Sobic010G044700 Sobic010G044700 Sobic008G009200--Sobic010G044700 Sobic005G171500 Sobic005G171500 Sobic008G009200--Sobic005G171500 Sobic001G354400 Sobic001G354400 Sobic008G009200--Sobic001G354400 Sobic005G217200 Sobic005G217200 Sobic008G009200--Sobic005G217200 Sobic003G244600 Sobic003G244600 Sobic008G009200--Sobic003G244600 Sobic002G035200 Sobic002G035200 Sobic008G009200--Sobic002G035200 Sobic002G122800 Sobic002G122800 Sobic008G009200--Sobic002G122800 Sobic008G009100--Sobic008G009200 Sobic008G009100--Sobic001G469500 Sobic007G011700 Sobic007G011700 Sobic008G009100--Sobic007G011700 Sobic003G263300 Sobic003G263300 Sobic008G009100--Sobic003G263300 Sobic008G009100--Sobic010G044700 Sobic001G401800 Sobic001G401800 Sobic008G009100--Sobic001G401800 Sobic003G031100 Sobic003G031100 Sobic008G009100--Sobic003G031100 Sobic008G183300 Sobic008G183300 Sobic008G009100--Sobic008G183300 Sobic002G024400 Sobic002G024400 Sobic008G009100--Sobic002G024400 Sobic007G135000 Sobic007G135000 Sobic001G469500--Sobic007G135000 Sobic001G469500--Sobic010G044700 Sobic003G363100 Sobic003G363100 Sobic001G469500--Sobic003G363100 Sobic010G192800 Sobic010G192800 Sobic001G469500--Sobic010G192800 Sobic003G022600 Sobic003G022600 Sobic001G469500--Sobic003G022600 Sobic003G039700 Sobic003G039700 Sobic001G469500--Sobic003G039700 Sobic003G097100 Sobic003G097100 Sobic001G469500--Sobic003G097100 Sobic002G130000 Sobic002G130000 Sobic001G469500--Sobic002G130000 Sobic001G469500--Sobic008G009200 Sobic010G044700--Sobic001G469500 Sobic009G241300 Sobic009G241300 Sobic010G044700--Sobic009G241300 Sobic010G044700--Sobic007G135000 Sobic010G044700--Sobic008G009200 Sobic009G241400 Sobic009G241400 Sobic010G044700--Sobic009G241400 Sobic010G044700--Sobic003G039700 Sobic010G044700--Sobic003G363100 Sobic007G001100 Sobic007G001100 Sobic010G044700--Sobic007G001100 Sobic009G012900 Sobic009G012900 Sobic010G044700--Sobic009G012900 Sobic005G171500--Sobic008G009200 Sobic005G169400 Sobic005G169400 Sobic005G171500--Sobic005G169400 Sobic005G171500--Sobic002G122800 Sobic005G171500--Sobic001G469500 Sobic009G016600 Sobic009G016600 Sobic005G171500--Sobic009G016600 Sobic005G171500--Sobic001G354400 Sobic009G207600 Sobic009G207600 Sobic005G171500--Sobic009G207600 Sobic007G063300 Sobic007G063300 Sobic005G171500--Sobic007G063300 Sobic005G171500--Sobic010G192800 Sobic003G203200 Sobic003G203200 Sobic001G354400--Sobic003G203200 Sobic001G354400--Sobic002G122800 Sobic001G316400 Sobic001G316400 Sobic001G354400--Sobic001G316400 Sobic006G181300 Sobic006G181300 Sobic001G354400--Sobic006G181300 Sobic006G246600 Sobic006G246600 Sobic001G354400--Sobic006G246600 Sobic004G226100 Sobic004G226100 Sobic001G354400--Sobic004G226100 Sobic001G354400--Sobic005G169400 Sobic009G114000 Sobic009G114000 Sobic001G354400--Sobic009G114000 Sobic008G048900 Sobic008G048900 Sobic001G354400--Sobic008G048900 Sobic008G189200 Sobic008G189200 Sobic005G217200--Sobic008G189200 Sobic010G210200 Sobic010G210200 Sobic005G217200--Sobic010G210200 Sobic005G217200--Sobic003G363100 Sobic009G126900 Sobic009G126900 Sobic005G217200--Sobic009G126900 Sobic004G237600 Sobic004G237600 Sobic005G217200--Sobic004G237600 Sobic003G276000 Sobic003G276000 Sobic005G217200--Sobic003G276000 Sobic005G217200--Sobic003G244600 Sobic010G162900 Sobic010G162900 Sobic005G217200--Sobic010G162900 Sobic002G172900 Sobic002G172900 Sobic005G217200--Sobic002G172900 Sobic003G244600--Sobic008G189200 Sobic006G030700 Sobic006G030700 Sobic003G244600--Sobic006G030700 Sobic002G304000 Sobic002G304000 Sobic003G244600--Sobic002G304000 Sobic006G091700 Sobic006G091700 Sobic003G244600--Sobic006G091700 Sobic003G105800 Sobic003G105800 Sobic003G244600--Sobic003G105800 Sobic005G216000 Sobic005G216000 Sobic003G244600--Sobic005G216000 Sobic007G186200 Sobic007G186200 Sobic003G244600--Sobic007G186200 Sobic001G015500 Sobic001G015500 Sobic003G244600--Sobic001G015500 Sobic009G226300 Sobic009G226300 Sobic003G244600--Sobic009G226300 Sobic002G035200--Sobic005G217200 Sobic002G035200--Sobic003G363100 Sobic002G035200--Sobic001G469500 Sobic006G076800 Sobic006G076800 Sobic002G035200--Sobic006G076800 Sobic005G024200 Sobic005G024200 Sobic002G035200--Sobic005G024200 Sobic002G373100 Sobic002G373100 Sobic002G035200--Sobic002G373100 Sobic007G185200 Sobic007G185200 Sobic002G035200--Sobic007G185200 Sobic002G035200--Sobic007G001100 Sobic008G079300 Sobic008G079300 Sobic002G035200--Sobic008G079300 Sobic002G122800--Sobic009G114000 Sobic003G111200 Sobic003G111200 Sobic002G122800--Sobic003G111200 Sobic002G122800--Sobic003G203200 Sobic002G122800--Sobic005G169400 Sobic002G122800--Sobic001G316400 Sobic002G122800--Sobic001G354400 Sobic002G122800--Sobic006G181300 Sobic002G122800--Sobic006G091700 Sobic002G085300 Sobic002G085300 Sobic002G122800--Sobic002G085300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.