Gene annotation
Transcriptome id Sobic.002G023300.1
Synonym Sb02g002150
Functional annotation SCP-like extracellular protein, expressed
UniProt C5X8S2
Pfam PF00188
Panther DB PTHR10334 PTHR10334:SF195
NCBI CDD KOG3017; Defense-related protein containing SCP domain
KEGG Orthology K13449; pathogenesis-related protein 1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G14610 : pathogenesis-related gene 1
RAP-DB (Rice) LOC_Os07g03710.1 : SCP-like extracellular protein, expressed
MaizeGDB (Corn) Zm00025a044956 , Zm00025a045588 , Zm00025a044959
Brachypodium -
Barley HORVU5Hr1G055950.2 , HORVU5Hr1G055950.1 , HORVU5Hr1G056040.1 , HORVU7Hr1G040740.4 , HORVU7Hr1G040740.5 , HORVU7Hr1G040740.2 , HORVU7Hr1G040740.3 , HORVU7Hr1G040740.1 , HORVU5Hr1G106010.1 , HORVU5Hr1G106010.3 , HORVU5Hr1G106010.2 , HORVU7Hr1G040730.1
Wheat TraesCS5B02G443000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G244600 similar to PRm 3(PubMedID : 29862293)@glycosyl hydrolase, putative, expressed K01183: chitinase
2 Sobic.005G169400 WIP5 - Wound-induced protein precursor, expressed -
3 Sobic.006G132500 CHIT3 - Chitinase family protein precursor, expressed K01183: chitinase
4 Sobic.003G111200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PIII1 - Proteinase inhibitor II family protein precursor, expressed -
5 Sobic.008G079300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
6 Sobic.003G184900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@esterase, putative, expressed -
7 Sobic.004G320600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyltransferase, putative, expressed -
8 Sobic.003G388251 - K01166: ribonuclease T2
9 Sobic.008G182700 thaumatin, putative, expressed -
10 Sobic.004G321800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@saccharopine dehydrogenase, putative, expressed K14157: alpha-aminoadipic semialdehyde synthase
11 Sobic.006G030700 receptor kinase, putative, expressed -
12 Sobic.005G133200 disease resistance RPP13-like protein 1, putative, expressed -
13 Sobic.001G145700 thaumatin, putative, expressed -
14 Sobic.010G192800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.002G338100 THYLAKOID FORMATION1, chloroplast precursor, putative, expressed -
16 Sobic.004G060900 STRUBBELIG-RECEPTOR FAMILY 3 precursor, putative, expressed -
17 Sobic.001G474500 mitochondrial carrier protein, putative, expressed -
18 Sobic.008G182300 thaumatin, putative, expressed -
19 Sobic.002G087800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@1-aminocyclopropane-1-carboxylate oxidase 2, putative, expressed -
20 Sobic.009G207600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@dnaJ domain containing protein, expressed -


Gene co-expression network
sample Sobic002G023300 Sobic002G023300 Sobic003G244600 Sobic003G244600 Sobic002G023300--Sobic003G244600 Sobic005G169400 Sobic005G169400 Sobic002G023300--Sobic005G169400 Sobic006G132500 Sobic006G132500 Sobic002G023300--Sobic006G132500 Sobic003G111200 Sobic003G111200 Sobic002G023300--Sobic003G111200 Sobic008G079300 Sobic008G079300 Sobic002G023300--Sobic008G079300 Sobic003G184900 Sobic003G184900 Sobic002G023300--Sobic003G184900 Sobic004G320600 Sobic004G320600 Sobic002G023300--Sobic004G320600 Sobic003G388251 Sobic003G388251 Sobic002G023300--Sobic003G388251 Sobic008G182700 Sobic008G182700 Sobic002G023300--Sobic008G182700 Sobic008G189200 Sobic008G189200 Sobic003G244600--Sobic008G189200 Sobic006G030700 Sobic006G030700 Sobic003G244600--Sobic006G030700 Sobic002G304000 Sobic002G304000 Sobic003G244600--Sobic002G304000 Sobic006G091700 Sobic006G091700 Sobic003G244600--Sobic006G091700 Sobic003G105800 Sobic003G105800 Sobic003G244600--Sobic003G105800 Sobic005G216000 Sobic005G216000 Sobic003G244600--Sobic005G216000 Sobic007G186200 Sobic007G186200 Sobic003G244600--Sobic007G186200 Sobic001G015500 Sobic001G015500 Sobic003G244600--Sobic001G015500 Sobic009G226300 Sobic009G226300 Sobic003G244600--Sobic009G226300 Sobic005G169400--Sobic003G111200 Sobic009G114000 Sobic009G114000 Sobic005G169400--Sobic009G114000 Sobic004G321800 Sobic004G321800 Sobic005G169400--Sobic004G321800 Sobic006G226400 Sobic006G226400 Sobic005G169400--Sobic006G226400 Sobic003G087200 Sobic003G087200 Sobic005G169400--Sobic003G087200 Sobic005G169400--Sobic004G320600 Sobic005G169400--Sobic008G079300 Sobic005G169400--Sobic003G244600 Sobic001G069900 Sobic001G069900 Sobic005G169400--Sobic001G069900 Sobic010G210200 Sobic010G210200 Sobic006G132500--Sobic010G210200 Sobic008G182300 Sobic008G182300 Sobic006G132500--Sobic008G182300 Sobic006G132500--Sobic003G244600 Sobic006G132500--Sobic005G169400 Sobic001G145600 Sobic001G145600 Sobic006G132500--Sobic001G145600 Sobic003G111300 Sobic003G111300 Sobic006G132500--Sobic003G111300 Sobic005G215900 Sobic005G215900 Sobic006G132500--Sobic005G215900 Sobic006G132500--Sobic002G023300 Sobic001G145700 Sobic001G145700 Sobic006G132500--Sobic001G145700 Sobic003G111200--Sobic005G169400 Sobic002G122800 Sobic002G122800 Sobic003G111200--Sobic002G122800 Sobic003G111200--Sobic009G114000 Sobic003G111200--Sobic003G111300 Sobic003G111200--Sobic006G226400 Sobic003G111200--Sobic002G023300 Sobic002G084600 Sobic002G084600 Sobic003G111200--Sobic002G084600 Sobic007G163901 Sobic007G163901 Sobic003G111200--Sobic007G163901 Sobic003G111200--Sobic004G321800 Sobic008G079300--Sobic003G184900 Sobic008G079300--Sobic003G105800 Sobic007G225900 Sobic007G225900 Sobic008G079300--Sobic007G225900 Sobic008G079300--Sobic004G321800 Sobic009G207600 Sobic009G207600 Sobic008G079300--Sobic009G207600 Sobic005G178100 Sobic005G178100 Sobic008G079300--Sobic005G178100 Sobic009G034700 Sobic009G034700 Sobic008G079300--Sobic009G034700 Sobic001G474500 Sobic001G474500 Sobic008G079300--Sobic001G474500 Sobic001G325200 Sobic001G325200 Sobic008G079300--Sobic001G325200 Sobic003G184900--Sobic003G105800 Sobic003G184900--Sobic008G079300 Sobic003G184900--Sobic004G321800 Sobic006G100332 Sobic006G100332 Sobic003G184900--Sobic006G100332 Sobic003G184900--Sobic007G225900 Sobic002G324000 Sobic002G324000 Sobic003G184900--Sobic002G324000 Sobic003G184900--Sobic003G087200 Sobic003G184900--Sobic005G178100 Sobic001G182500 Sobic001G182500 Sobic003G184900--Sobic001G182500 Sobic004G320600--Sobic006G226400 Sobic004G320600--Sobic004G321800 Sobic004G320600--Sobic003G087200 Sobic007G092900 Sobic007G092900 Sobic004G320600--Sobic007G092900 Sobic004G320600--Sobic006G100332 Sobic007G093000 Sobic007G093000 Sobic004G320600--Sobic007G093000 Sobic007G187300 Sobic007G187300 Sobic004G320600--Sobic007G187300 Sobic004G320600--Sobic009G226300 Sobic004G320600--Sobic005G178100 Sobic004G124200 Sobic004G124200 Sobic003G388251--Sobic004G124200 Sobic007G068100 Sobic007G068100 Sobic003G388251--Sobic007G068100 Sobic003G388251--Sobic001G325200 Sobic003G388251--Sobic001G474500 Sobic004G101900 Sobic004G101900 Sobic003G388251--Sobic004G101900 Sobic003G388251--Sobic005G178100 Sobic003G388251--Sobic009G034700 Sobic009G057300 Sobic009G057300 Sobic003G388251--Sobic009G057300 Sobic003G388251--Sobic001G015500 Sobic008G182700--Sobic002G324000 Sobic008G182700--Sobic003G184900 Sobic009G226600 Sobic009G226600 Sobic008G182700--Sobic009G226600 Sobic008G182700--Sobic008G079300 Sobic008G182700--Sobic005G169400 Sobic002G190500 Sobic002G190500 Sobic008G182700--Sobic002G190500 Sobic008G182700--Sobic009G207600 Sobic004G063400 Sobic004G063400 Sobic008G182700--Sobic004G063400 Sobic002G087800 Sobic002G087800 Sobic008G182700--Sobic002G087800
Octagon: transcription factors


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