Gene annotation
Transcriptome id Sobic.008G182700.1
Synonym ATOSM34, Sb08g022430, OSM34
Functional annotation thaumatin, putative, expressed
UniProt C5YSK5
Pfam PF00314
Panther DB PTHR31048 PTHR31048:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G11650 : osmotin 34
RAP-DB (Rice) LOC_Os12g43430.1 : thaumatin, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G324000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@isocitrate lyase, putative, expressed K01637: E4.1.3.1, isocitrate lyase
2 Sobic.003G184900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@esterase, putative, expressed -
3 Sobic.009G226600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@wax synthase, putative, expressed -
4 Sobic.008G079300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
5 Sobic.005G169400 WIP5 - Wound-induced protein precursor, expressed -
6 Sobic.002G190500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@alpha-amylase precursor, putative, expressed K01176: AMY, amyA, alpha-amylase
7 Sobic.009G207600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@dnaJ domain containing protein, expressed -
8 Sobic.004G063400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@GDU1, putative, expressed -
9 Sobic.002G087800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@1-aminocyclopropane-1-carboxylate oxidase 2, putative, expressed -
10 Sobic.003G087200 nuclease PA3, putative, expressed -
11 Sobic.006G181300 Polyphenol oxidas(PubMedID : 28818380)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@polyphenol oxidase, putative, expressed K00422: polyphenol oxidase
12 Sobic.005G130400 terpene synthase, putative, expressed K15803: (-)-germacrene D synthase
13 Sobic.001G474500 mitochondrial carrier protein, putative, expressed -
14 Sobic.004G060900 STRUBBELIG-RECEPTOR FAMILY 3 precursor, putative, expressed -
15 Sobic.002G023300 SCP-like extracellular protein, expressed K13449: pathogenesis-related protein 1
16 Sobic.002G338100 THYLAKOID FORMATION1, chloroplast precursor, putative, expressed -
17 Sobic.001G069900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase
18 Sobic.004G321800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@saccharopine dehydrogenase, putative, expressed K14157: alpha-aminoadipic semialdehyde synthase
19 Sobic.009G034700 aspartic proteinase oryzasin-1 precursor, putative, expressed K08245: phytepsin
20 Sobic.004G113300 cyclic nucleotide-gated ion channel 1, putative, expressed K05391: cyclic nucleotide gated channel, plant


Gene co-expression network
sample Sobic008G182700 Sobic008G182700 Sobic002G324000 Sobic002G324000 Sobic008G182700--Sobic002G324000 Sobic003G184900 Sobic003G184900 Sobic008G182700--Sobic003G184900 Sobic009G226600 Sobic009G226600 Sobic008G182700--Sobic009G226600 Sobic008G079300 Sobic008G079300 Sobic008G182700--Sobic008G079300 Sobic005G169400 Sobic005G169400 Sobic008G182700--Sobic005G169400 Sobic002G190500 Sobic002G190500 Sobic008G182700--Sobic002G190500 Sobic009G207600 Sobic009G207600 Sobic008G182700--Sobic009G207600 Sobic004G063400 Sobic004G063400 Sobic008G182700--Sobic004G063400 Sobic002G087800 Sobic002G087800 Sobic008G182700--Sobic002G087800 Sobic002G324000--Sobic002G190500 Sobic004G113300 Sobic004G113300 Sobic002G324000--Sobic004G113300 Sobic002G324000--Sobic003G184900 Sobic005G130400 Sobic005G130400 Sobic002G324000--Sobic005G130400 Sobic004G321800 Sobic004G321800 Sobic002G324000--Sobic004G321800 Sobic004G050200 Sobic004G050200 Sobic002G324000--Sobic004G050200 Sobic001G274800 Sobic001G274800 Sobic002G324000--Sobic001G274800 Sobic002G324000--Sobic008G182700 Sobic004G060900 Sobic004G060900 Sobic002G324000--Sobic004G060900 Sobic003G105800 Sobic003G105800 Sobic003G184900--Sobic003G105800 Sobic003G184900--Sobic008G079300 Sobic003G184900--Sobic004G321800 Sobic006G100332 Sobic006G100332 Sobic003G184900--Sobic006G100332 Sobic007G225900 Sobic007G225900 Sobic003G184900--Sobic007G225900 Sobic003G184900--Sobic002G324000 Sobic003G087200 Sobic003G087200 Sobic003G184900--Sobic003G087200 Sobic005G178100 Sobic005G178100 Sobic003G184900--Sobic005G178100 Sobic001G182500 Sobic001G182500 Sobic003G184900--Sobic001G182500 Sobic009G226600--Sobic008G079300 Sobic009G226600--Sobic002G087800 Sobic009G226600--Sobic009G207600 Sobic001G474500 Sobic001G474500 Sobic009G226600--Sobic001G474500 Sobic009G226600--Sobic008G182700 Sobic009G226600--Sobic003G184900 Sobic009G226600--Sobic002G324000 Sobic006G181300 Sobic006G181300 Sobic009G226600--Sobic006G181300 Sobic001G359500 Sobic001G359500 Sobic009G226600--Sobic001G359500 Sobic008G079300--Sobic003G184900 Sobic008G079300--Sobic003G105800 Sobic008G079300--Sobic007G225900 Sobic008G079300--Sobic004G321800 Sobic008G079300--Sobic009G207600 Sobic008G079300--Sobic005G178100 Sobic009G034700 Sobic009G034700 Sobic008G079300--Sobic009G034700 Sobic008G079300--Sobic001G474500 Sobic001G325200 Sobic001G325200 Sobic008G079300--Sobic001G325200 Sobic003G111200 Sobic003G111200 Sobic005G169400--Sobic003G111200 Sobic009G114000 Sobic009G114000 Sobic005G169400--Sobic009G114000 Sobic005G169400--Sobic004G321800 Sobic006G226400 Sobic006G226400 Sobic005G169400--Sobic006G226400 Sobic005G169400--Sobic003G087200 Sobic004G320600 Sobic004G320600 Sobic005G169400--Sobic004G320600 Sobic005G169400--Sobic008G079300 Sobic003G244600 Sobic003G244600 Sobic005G169400--Sobic003G244600 Sobic001G069900 Sobic001G069900 Sobic005G169400--Sobic001G069900 Sobic002G190500--Sobic002G324000 Sobic002G190500--Sobic004G113300 Sobic002G190500--Sobic005G130400 Sobic002G190500--Sobic004G050200 Sobic002G190500--Sobic003G184900 Sobic004G345800 Sobic004G345800 Sobic002G190500--Sobic004G345800 Sobic002G190500--Sobic004G321800 Sobic007G216201 Sobic007G216201 Sobic002G190500--Sobic007G216201 Sobic002G190500--Sobic008G079300 Sobic001G504900 Sobic001G504900 Sobic009G207600--Sobic001G504900 Sobic003G398100 Sobic003G398100 Sobic009G207600--Sobic003G398100 Sobic002G338100 Sobic002G338100 Sobic009G207600--Sobic002G338100 Sobic009G207600--Sobic008G079300 Sobic009G207600--Sobic001G474500 Sobic008G153400 Sobic008G153400 Sobic009G207600--Sobic008G153400 Sobic001G496100 Sobic001G496100 Sobic009G207600--Sobic001G496100 Sobic006G091700 Sobic006G091700 Sobic009G207600--Sobic006G091700 Sobic009G207600--Sobic003G087200 Sobic004G063400--Sobic001G504900 Sobic002G130000 Sobic002G130000 Sobic004G063400--Sobic002G130000 Sobic004G063400--Sobic009G034700 Sobic004G063400--Sobic008G079300 Sobic004G063400--Sobic009G207600 Sobic004G063400--Sobic005G178100 Sobic004G063400--Sobic001G069900 Sobic001G015500 Sobic001G015500 Sobic004G063400--Sobic001G015500 Sobic004G063400--Sobic006G181300 Sobic005G024900 Sobic005G024900 Sobic002G087800--Sobic005G024900 Sobic009G057300 Sobic009G057300 Sobic002G087800--Sobic009G057300 Sobic003G388251 Sobic003G388251 Sobic002G087800--Sobic003G388251 Sobic002G087800--Sobic009G226600 Sobic003G241500 Sobic003G241500 Sobic002G087800--Sobic003G241500 Sobic002G087800--Sobic001G474500 Sobic003G061800 Sobic003G061800 Sobic002G087800--Sobic003G061800 Sobic001G305800 Sobic001G305800 Sobic002G087800--Sobic001G305800 Sobic002G087800--Sobic005G178100
Octagon: transcription factors


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