Gene annotation
Transcriptome id Sobic.003G111200.1
Synonym Sb03g009360
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
PIII1 - Proteinase inhibitor II family protein precursor, expressed
UniProt A0A1B6Q2N4
Pfam PF02428
Panther DB PTHR33832 PTHR33832:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0004867; serine-type endopeptidase inhibitor activity


Orthologs (automatic annotation)
TAIR AT1G72060 : serine-type endopeptidase inhibitors
RAP-DB (Rice) LOC_Os03g52390.1 : PIII1 - Proteinase inhibitor II family protein precursor, expressed
MaizeGDB (Corn) Zm00025a023906
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G169400 WIP5 - Wound-induced protein precursor, expressed -
2 Sobic.002G122800 expressed protein -
3 Sobic.009G114000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Os5bglu22 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed K01188: beta-glucosidase
4 Sobic.003G111300 PIII1 - Proteinase inhibitor II family protein precursor, expressed -
5 Sobic.006G226400 leucoanthocyanidin reductase, putative, expressed -
6 Sobic.002G023300 SCP-like extracellular protein, expressed K13449: pathogenesis-related protein 1
7 Sobic.002G084600 - -
8 Sobic.007G163901 - -
9 Sobic.004G321800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@saccharopine dehydrogenase, putative, expressed K14157: alpha-aminoadipic semialdehyde synthase
10 Sobic.004G320600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyltransferase, putative, expressed -
11 Sobic.003G244600 similar to PRm 3(PubMedID : 29862293)@glycosyl hydrolase, putative, expressed K01183: chitinase
12 Sobic.009G207600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@dnaJ domain containing protein, expressed -
13 Sobic.006G091700 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
14 Sobic.009G107600 inhibitor I family protein, putative, expressed -
15 Sobic.003G087200 nuclease PA3, putative, expressed -
16 Sobic.001G069900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase
17 Sobic.006G181300 Polyphenol oxidas(PubMedID : 28818380)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@polyphenol oxidase, putative, expressed K00422: polyphenol oxidase
18 Sobic.003G029000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@lecithin:cholesterol acyltransferase, putative, expressed K06129: lysophospholipase III
19 Sobic.005G178100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@F-box/Kelch-repeat protein, putative, expressed -
20 Sobic.007G092900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic003G111200 Sobic003G111200 Sobic005G169400 Sobic005G169400 Sobic003G111200--Sobic005G169400 Sobic002G122800 Sobic002G122800 Sobic003G111200--Sobic002G122800 Sobic009G114000 Sobic009G114000 Sobic003G111200--Sobic009G114000 Sobic003G111300 Sobic003G111300 Sobic003G111200--Sobic003G111300 Sobic006G226400 Sobic006G226400 Sobic003G111200--Sobic006G226400 Sobic002G023300 Sobic002G023300 Sobic003G111200--Sobic002G023300 Sobic002G084600 Sobic002G084600 Sobic003G111200--Sobic002G084600 Sobic007G163901 Sobic007G163901 Sobic003G111200--Sobic007G163901 Sobic004G321800 Sobic004G321800 Sobic003G111200--Sobic004G321800 Sobic005G169400--Sobic003G111200 Sobic005G169400--Sobic009G114000 Sobic005G169400--Sobic004G321800 Sobic005G169400--Sobic006G226400 Sobic003G087200 Sobic003G087200 Sobic005G169400--Sobic003G087200 Sobic004G320600 Sobic004G320600 Sobic005G169400--Sobic004G320600 Sobic008G079300 Sobic008G079300 Sobic005G169400--Sobic008G079300 Sobic003G244600 Sobic003G244600 Sobic005G169400--Sobic003G244600 Sobic001G069900 Sobic001G069900 Sobic005G169400--Sobic001G069900 Sobic002G122800--Sobic009G114000 Sobic002G122800--Sobic003G111200 Sobic003G203200 Sobic003G203200 Sobic002G122800--Sobic003G203200 Sobic002G122800--Sobic005G169400 Sobic001G316400 Sobic001G316400 Sobic002G122800--Sobic001G316400 Sobic001G354400 Sobic001G354400 Sobic002G122800--Sobic001G354400 Sobic006G181300 Sobic006G181300 Sobic002G122800--Sobic006G181300 Sobic006G091700 Sobic006G091700 Sobic002G122800--Sobic006G091700 Sobic002G085300 Sobic002G085300 Sobic002G122800--Sobic002G085300 Sobic009G114000--Sobic006G091700 Sobic009G114000--Sobic003G087200 Sobic009G114000--Sobic006G226400 Sobic009G114000--Sobic006G181300 Sobic009G114000--Sobic002G085300 Sobic001G150600 Sobic001G150600 Sobic009G114000--Sobic001G150600 Sobic009G114000--Sobic001G069900 Sobic009G114000--Sobic002G122800 Sobic006G030700 Sobic006G030700 Sobic009G114000--Sobic006G030700 Sobic006G132500 Sobic006G132500 Sobic003G111300--Sobic006G132500 Sobic003G111300--Sobic003G111200 Sobic004G008800 Sobic004G008800 Sobic003G111300--Sobic004G008800 Sobic006G155000 Sobic006G155000 Sobic003G111300--Sobic006G155000 Sobic010G210200 Sobic010G210200 Sobic003G111300--Sobic010G210200 Sobic003G111300--Sobic002G122800 Sobic003G442500 Sobic003G442500 Sobic003G111300--Sobic003G442500 Sobic003G061400 Sobic003G061400 Sobic003G111300--Sobic003G061400 Sobic003G111300--Sobic005G169400 Sobic006G226400--Sobic004G320600 Sobic006G226400--Sobic003G087200 Sobic006G226400--Sobic009G114000 Sobic006G226400--Sobic001G150600 Sobic007G092900 Sobic007G092900 Sobic006G226400--Sobic007G092900 Sobic006G226400--Sobic006G091700 Sobic006G226400--Sobic004G321800 Sobic007G093000 Sobic007G093000 Sobic006G226400--Sobic007G093000 Sobic002G420700 Sobic002G420700 Sobic006G226400--Sobic002G420700 Sobic002G023300--Sobic003G244600 Sobic002G023300--Sobic005G169400 Sobic002G023300--Sobic006G132500 Sobic002G023300--Sobic003G111200 Sobic002G023300--Sobic008G079300 Sobic003G184900 Sobic003G184900 Sobic002G023300--Sobic003G184900 Sobic002G023300--Sobic004G320600 Sobic003G388251 Sobic003G388251 Sobic002G023300--Sobic003G388251 Sobic008G182700 Sobic008G182700 Sobic002G023300--Sobic008G182700 Sobic009G058200 Sobic009G058200 Sobic002G084600--Sobic009G058200 Sobic008G053900 Sobic008G053900 Sobic002G084600--Sobic008G053900 Sobic006G225700 Sobic006G225700 Sobic002G084600--Sobic006G225700 Sobic002G084600--Sobic007G163901 Sobic002G084600--Sobic003G111200 Sobic009G107600 Sobic009G107600 Sobic002G084600--Sobic009G107600 Sobic008G028800 Sobic008G028800 Sobic002G084600--Sobic008G028800 Sobic002G084600--Sobic005G169400 Sobic004G227550 Sobic004G227550 Sobic002G084600--Sobic004G227550 Sobic007G163901--Sobic002G084600 Sobic007G163901--Sobic003G111200 Sobic007G163901--Sobic006G226400 Sobic007G163901--Sobic003G061400 Sobic010G135900 Sobic010G135900 Sobic007G163901--Sobic010G135900 Sobic007G163901--Sobic005G169400 Sobic007G163901--Sobic009G114000 Sobic002G190500 Sobic002G190500 Sobic007G163901--Sobic002G190500 Sobic007G163901--Sobic004G320600 Sobic006G100332 Sobic006G100332 Sobic004G321800--Sobic006G100332 Sobic004G321800--Sobic003G087200 Sobic003G148800 Sobic003G148800 Sobic004G321800--Sobic003G148800 Sobic009G226300 Sobic009G226300 Sobic004G321800--Sobic009G226300 Sobic001G325200 Sobic001G325200 Sobic004G321800--Sobic001G325200 Sobic003G105800 Sobic003G105800 Sobic004G321800--Sobic003G105800 Sobic004G321800--Sobic003G184900 Sobic004G321800--Sobic001G150600 Sobic004G321800--Sobic004G320600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.