Gene annotation
Transcriptome id Sobic.003G029000.1
Synonym Sb03g002720
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
lecithin:cholesterol acyltransferase, putative, expressed
UniProt C5XLT9
Pfam PF02450
Panther DB PTHR11440 PTHR11440:SF50
NCBI CDD KOG2369; Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase
KEGG Orthology K06129; lysophospholipase III
Gene Ontology GO:0008374; O-acyltransferase activity GO:0006629lipid metabolic process


Orthologs (automatic annotation)
TAIR AT1G27480 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os10g08026.1 : lecithin:cholesterol acyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a022966 , Zm00025a022960
Brachypodium KQK05343
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G333200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
2 Sobic.005G178100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@F-box/Kelch-repeat protein, putative, expressed -
3 Sobic.002G420700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
4 Sobic.007G093000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed -
5 Sobic.003G111300 PIII1 - Proteinase inhibitor II family protein precursor, expressed -
6 Sobic.007G092900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed -
7 Sobic.004G320600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyltransferase, putative, expressed -
8 Sobic.009G114000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Os5bglu22 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed K01188: beta-glucosidase
9 Sobic.003G111200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PIII1 - Proteinase inhibitor II family protein precursor, expressed -
10 Sobic.005G215900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
11 Sobic.001G305800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@U-box domain containing protein, expressed -
12 Sobic.006G226400 leucoanthocyanidin reductase, putative, expressed -
13 Sobic.006G030700 receptor kinase, putative, expressed -
14 Sobic.001G322700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@5-oxoprolinase, putative, expressed K01469: OPLAH, OXP1, 5-oxoprolinase (ATP-hydrolysing)
15 Sobic.001G249300 Cf2/Cf5 disease resistance protein, putative, expressed -
16 Sobic.007G035000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@decarboxylase, putative, expressed K01592: tyrosine decarboxylase
17 Sobic.003G388251 - K01166: ribonuclease T2
18 Sobic.009G226300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
19 Sobic.003G061400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@basic helix-loop-helix, putative, expressed -
20 Sobic.010G182500 ras-related protein, putative, expressed K07936: GTP-binding nuclear protein Ran


Gene co-expression network
sample Sobic003G029000 Sobic003G029000 Sobic004G333200 Sobic004G333200 Sobic003G029000--Sobic004G333200 Sobic005G178100 Sobic005G178100 Sobic003G029000--Sobic005G178100 Sobic002G420700 Sobic002G420700 Sobic003G029000--Sobic002G420700 Sobic007G093000 Sobic007G093000 Sobic003G029000--Sobic007G093000 Sobic003G111300 Sobic003G111300 Sobic003G029000--Sobic003G111300 Sobic007G092900 Sobic007G092900 Sobic003G029000--Sobic007G092900 Sobic004G320600 Sobic004G320600 Sobic003G029000--Sobic004G320600 Sobic009G114000 Sobic009G114000 Sobic003G029000--Sobic009G114000 Sobic003G111200 Sobic003G111200 Sobic003G029000--Sobic003G111200 Sobic003G061400 Sobic003G061400 Sobic004G333200--Sobic003G061400 Sobic004G333200--Sobic005G178100 Sobic001G305800 Sobic001G305800 Sobic004G333200--Sobic001G305800 Sobic007G219900 Sobic007G219900 Sobic004G333200--Sobic007G219900 Sobic006G127100 Sobic006G127100 Sobic004G333200--Sobic006G127100 Sobic004G345800 Sobic004G345800 Sobic004G333200--Sobic004G345800 Sobic004G321800 Sobic004G321800 Sobic004G333200--Sobic004G321800 Sobic004G101900 Sobic004G101900 Sobic004G333200--Sobic004G101900 Sobic003G184900 Sobic003G184900 Sobic004G333200--Sobic003G184900 Sobic009G161000 Sobic009G161000 Sobic005G178100--Sobic009G161000 Sobic005G178100--Sobic001G305800 Sobic003G087200 Sobic003G087200 Sobic005G178100--Sobic003G087200 Sobic005G178100--Sobic002G420700 Sobic001G015500 Sobic001G015500 Sobic005G178100--Sobic001G015500 Sobic003G105800 Sobic003G105800 Sobic005G178100--Sobic003G105800 Sobic009G034700 Sobic009G034700 Sobic005G178100--Sobic009G034700 Sobic005G178100--Sobic003G184900 Sobic001G150600 Sobic001G150600 Sobic005G178100--Sobic001G150600 Sobic002G420700--Sobic005G178100 Sobic007G035000 Sobic007G035000 Sobic002G420700--Sobic007G035000 Sobic008G153400 Sobic008G153400 Sobic002G420700--Sobic008G153400 Sobic002G420700--Sobic003G087200 Sobic002G420700--Sobic009G114000 Sobic002G420700--Sobic001G150600 Sobic006G091700 Sobic006G091700 Sobic002G420700--Sobic006G091700 Sobic006G226400 Sobic006G226400 Sobic002G420700--Sobic006G226400 Sobic002G420700--Sobic001G015500 Sobic007G093000--Sobic007G092900 Sobic001G249300 Sobic001G249300 Sobic007G093000--Sobic001G249300 Sobic006G030700 Sobic006G030700 Sobic007G093000--Sobic006G030700 Sobic009G226300 Sobic009G226300 Sobic007G093000--Sobic009G226300 Sobic007G187300 Sobic007G187300 Sobic007G093000--Sobic007G187300 Sobic009G054500 Sobic009G054500 Sobic007G093000--Sobic009G054500 Sobic003G259200 Sobic003G259200 Sobic007G093000--Sobic003G259200 Sobic007G093000--Sobic001G150600 Sobic007G093000--Sobic004G320600 Sobic006G132500 Sobic006G132500 Sobic003G111300--Sobic006G132500 Sobic003G111300--Sobic003G111200 Sobic004G008800 Sobic004G008800 Sobic003G111300--Sobic004G008800 Sobic006G155000 Sobic006G155000 Sobic003G111300--Sobic006G155000 Sobic010G210200 Sobic010G210200 Sobic003G111300--Sobic010G210200 Sobic002G122800 Sobic002G122800 Sobic003G111300--Sobic002G122800 Sobic003G442500 Sobic003G442500 Sobic003G111300--Sobic003G442500 Sobic003G111300--Sobic003G061400 Sobic005G169400 Sobic005G169400 Sobic003G111300--Sobic005G169400 Sobic007G092900--Sobic007G093000 Sobic007G092900--Sobic009G226300 Sobic007G092900--Sobic001G249300 Sobic007G092900--Sobic006G030700 Sobic007G092900--Sobic009G054500 Sobic007G092900--Sobic007G187300 Sobic007G092900--Sobic001G150600 Sobic007G092900--Sobic004G320600 Sobic006G100332 Sobic006G100332 Sobic007G092900--Sobic006G100332 Sobic004G320600--Sobic006G226400 Sobic004G320600--Sobic004G321800 Sobic004G320600--Sobic003G087200 Sobic004G320600--Sobic007G092900 Sobic004G320600--Sobic006G100332 Sobic004G320600--Sobic007G093000 Sobic004G320600--Sobic007G187300 Sobic004G320600--Sobic009G226300 Sobic004G320600--Sobic005G178100 Sobic009G114000--Sobic006G091700 Sobic009G114000--Sobic003G087200 Sobic009G114000--Sobic006G226400 Sobic006G181300 Sobic006G181300 Sobic009G114000--Sobic006G181300 Sobic002G085300 Sobic002G085300 Sobic009G114000--Sobic002G085300 Sobic009G114000--Sobic001G150600 Sobic001G069900 Sobic001G069900 Sobic009G114000--Sobic001G069900 Sobic009G114000--Sobic002G122800 Sobic009G114000--Sobic006G030700 Sobic003G111200--Sobic005G169400 Sobic003G111200--Sobic002G122800 Sobic003G111200--Sobic009G114000 Sobic003G111200--Sobic003G111300 Sobic003G111200--Sobic006G226400 Sobic002G023300 Sobic002G023300 Sobic003G111200--Sobic002G023300 Sobic002G084600 Sobic002G084600 Sobic003G111200--Sobic002G084600 Sobic007G163901 Sobic007G163901 Sobic003G111200--Sobic007G163901 Sobic003G111200--Sobic004G321800
Octagon: transcription factors


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