Gene annotation
Transcriptome id Sobic.006G226400.1
Synonym BAN
Functional annotation leucoanthocyanidin reductase, putative, expressed
UniProt A0A1B6PND2
Pfam PF01370
Panther DB PTHR10366 PTHR10366:SF288
NCBI CDD KOG1502; Flavonol reductase/cinnamoyl-CoA reductase
KEGG Orthology -
Gene Ontology GO:0003824; catalytic activity


Orthologs (automatic annotation)
TAIR AT1G61720 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os04g53850.1 : leucoanthocyanidin reductase, putative, expressed
MaizeGDB (Corn) Zm00025a057102 , Zm00025a057103
Brachypodium KQJ84787
Barley HORVU2Hr1G108180.2 , HORVU2Hr1G108180.3 , HORVU2Hr1G108180.1 , HORVU2Hr1G108180.4 , HORVU2Hr1G108180.5 , HORVU2Hr1G108110.12 , HORVU2Hr1G108250.2 , HORVU2Hr1G108250.3 , HORVU2Hr1G108250.1 , HORVU2Hr1G108250.6 , HORVU2Hr1G108250.4
Wheat TraesCS2D02G481600 , TraesCS2D02G481600 , TraesCS2B02G507500 , TraesCS2B02G507700 , TraesCS2B02G507700 , TraesCS2A02G483100 , TraesCS2D02G483100 , TraesCS2B02G507600 , TraesCS2A02G481300 , TraesCS2A02G481900 , TraesCS2A02G482100 , TraesCS2A02G482100 , TraesCS2D02G481500 , TraesCS2D02G482000 , TraesCS2D02G482000 , TraesCS2D02G481700 , TraesCS2A02G481800 , TraesCS2A02G481200 , TraesCS2B02G508400
Populus -


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cDNA sequences
Sobic.006G226400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G320600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyltransferase, putative, expressed -
2 Sobic.003G087200 nuclease PA3, putative, expressed -
3 Sobic.009G114000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Os5bglu22 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed K01188: beta-glucosidase
4 Sobic.001G150600 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K13606: NOL, chlorophyll(ide) b reductase
5 Sobic.007G092900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed -
6 Sobic.006G091700 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
7 Sobic.004G321800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@saccharopine dehydrogenase, putative, expressed K14157: alpha-aminoadipic semialdehyde synthase
8 Sobic.007G093000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed -
9 Sobic.002G420700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
10 Sobic.005G178100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@F-box/Kelch-repeat protein, putative, expressed -
11 Sobic.006G030700 receptor kinase, putative, expressed -
12 Sobic.006G100332 - -
13 Sobic.008G153400 peptidase, putative, expressed K18151: ureidoglycolate amidohydrolase
14 Sobic.009G207600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@dnaJ domain containing protein, expressed -
15 Sobic.005G169400 WIP5 - Wound-induced protein precursor, expressed -
16 Sobic.009G226300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
17 Sobic.001G015500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@inner membrane protein, putative, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
18 Sobic.004G101900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@citrate synthase, putative, expressed K01647: CS, citrate synthase
19 Sobic.001G069900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase
20 Sobic.002G304000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@nitrilase, putative, expressed K01431: UPB1, beta-ureidopropionase


Gene co-expression network
sample Sobic006G226400 Sobic006G226400 Sobic004G320600 Sobic004G320600 Sobic006G226400--Sobic004G320600 Sobic003G087200 Sobic003G087200 Sobic006G226400--Sobic003G087200 Sobic009G114000 Sobic009G114000 Sobic006G226400--Sobic009G114000 Sobic001G150600 Sobic001G150600 Sobic006G226400--Sobic001G150600 Sobic007G092900 Sobic007G092900 Sobic006G226400--Sobic007G092900 Sobic006G091700 Sobic006G091700 Sobic006G226400--Sobic006G091700 Sobic004G321800 Sobic004G321800 Sobic006G226400--Sobic004G321800 Sobic007G093000 Sobic007G093000 Sobic006G226400--Sobic007G093000 Sobic002G420700 Sobic002G420700 Sobic006G226400--Sobic002G420700 Sobic004G320600--Sobic006G226400 Sobic004G320600--Sobic004G321800 Sobic004G320600--Sobic003G087200 Sobic004G320600--Sobic007G092900 Sobic006G100332 Sobic006G100332 Sobic004G320600--Sobic006G100332 Sobic004G320600--Sobic007G093000 Sobic007G187300 Sobic007G187300 Sobic004G320600--Sobic007G187300 Sobic009G226300 Sobic009G226300 Sobic004G320600--Sobic009G226300 Sobic005G178100 Sobic005G178100 Sobic004G320600--Sobic005G178100 Sobic003G087200--Sobic001G150600 Sobic003G087200--Sobic006G100332 Sobic003G087200--Sobic004G321800 Sobic006G030700 Sobic006G030700 Sobic003G087200--Sobic006G030700 Sobic003G087200--Sobic009G226300 Sobic003G087200--Sobic006G091700 Sobic003G148800 Sobic003G148800 Sobic003G087200--Sobic003G148800 Sobic008G153400 Sobic008G153400 Sobic003G087200--Sobic008G153400 Sobic003G087200--Sobic009G114000 Sobic009G114000--Sobic006G091700 Sobic009G114000--Sobic003G087200 Sobic009G114000--Sobic006G226400 Sobic006G181300 Sobic006G181300 Sobic009G114000--Sobic006G181300 Sobic002G085300 Sobic002G085300 Sobic009G114000--Sobic002G085300 Sobic009G114000--Sobic001G150600 Sobic001G069900 Sobic001G069900 Sobic009G114000--Sobic001G069900 Sobic002G122800 Sobic002G122800 Sobic009G114000--Sobic002G122800 Sobic009G114000--Sobic006G030700 Sobic001G150600--Sobic003G087200 Sobic001G150600--Sobic006G100332 Sobic001G150600--Sobic008G153400 Sobic001G150600--Sobic006G030700 Sobic001G150600--Sobic009G226300 Sobic001G150600--Sobic003G148800 Sobic001G325200 Sobic001G325200 Sobic001G150600--Sobic001G325200 Sobic009G054500 Sobic009G054500 Sobic001G150600--Sobic009G054500 Sobic001G150600--Sobic004G321800 Sobic007G092900--Sobic007G093000 Sobic007G092900--Sobic009G226300 Sobic001G249300 Sobic001G249300 Sobic007G092900--Sobic001G249300 Sobic007G092900--Sobic006G030700 Sobic007G092900--Sobic009G054500 Sobic007G092900--Sobic007G187300 Sobic007G092900--Sobic001G150600 Sobic007G092900--Sobic004G320600 Sobic007G092900--Sobic006G100332 Sobic006G091700--Sobic009G114000 Sobic006G091700--Sobic003G087200 Sobic006G091700--Sobic001G150600 Sobic006G091700--Sobic002G085300 Sobic001G015500 Sobic001G015500 Sobic006G091700--Sobic001G015500 Sobic006G091700--Sobic008G153400 Sobic006G091700--Sobic006G030700 Sobic006G199000 Sobic006G199000 Sobic006G091700--Sobic006G199000 Sobic006G091700--Sobic001G069900 Sobic004G321800--Sobic006G100332 Sobic004G321800--Sobic003G087200 Sobic004G321800--Sobic003G148800 Sobic004G321800--Sobic009G226300 Sobic004G321800--Sobic001G325200 Sobic003G105800 Sobic003G105800 Sobic004G321800--Sobic003G105800 Sobic003G184900 Sobic003G184900 Sobic004G321800--Sobic003G184900 Sobic004G321800--Sobic001G150600 Sobic004G321800--Sobic004G320600 Sobic007G093000--Sobic007G092900 Sobic007G093000--Sobic001G249300 Sobic007G093000--Sobic006G030700 Sobic007G093000--Sobic009G226300 Sobic007G093000--Sobic007G187300 Sobic007G093000--Sobic009G054500 Sobic003G259200 Sobic003G259200 Sobic007G093000--Sobic003G259200 Sobic007G093000--Sobic001G150600 Sobic007G093000--Sobic004G320600 Sobic002G420700--Sobic005G178100 Sobic007G035000 Sobic007G035000 Sobic002G420700--Sobic007G035000 Sobic002G420700--Sobic008G153400 Sobic002G420700--Sobic003G087200 Sobic002G420700--Sobic009G114000 Sobic002G420700--Sobic001G150600 Sobic002G420700--Sobic006G091700 Sobic002G420700--Sobic006G226400 Sobic002G420700--Sobic001G015500
Octagon: transcription factors


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