Gene annotation
Transcriptome id Sobic.002G420700.1
Synonym Sb02g043210, anac025, NAC025
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
no apical meristem protein, putative, expressed
UniProt C5X5P2
Pfam PF02365
Panther DB PTHR31719 PTHR31719:SF26
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT1G61110 : NAC domain containing protein 25
RAP-DB (Rice) LOC_Os07g48450.1 : no apical meristem protein, putative, expressed
MaizeGDB (Corn) Zm00025a002287 , Zm00025a013388 , Zm00025a049186 , Zm00025a040616 , Zm00025a035397 , Zm00025a025343 , Zm00025a053749 , Zm00025a052457 , Zm00025a034042 , Zm00025a048416 , Zm00025a026546 , Zm00025a047596 , Zm00025a045432 , Zm00025a009747
Brachypodium KQK03520 , KQK14591 , KQK02753 , KQK19730 , KQJ85858 , KQK20318 , KQK06182 , KQK10307 , KQK15684 , KQK15686 , KQJ84638 , KQK10926 , KQK15688 , KQJ92488 , PNT71229 , KQJ87582 , KQK21867 , PNT76596
Barley HORVU4Hr1G017430.7 , HORVU4Hr1G017430.6 , HORVU4Hr1G017430.5 , HORVU4Hr1G017430.4 , HORVU4Hr1G017430.3 , HORVU4Hr1G017430.2 , HORVU4Hr1G017430.1 , HORVU4Hr1G017430.9 , HORVU4Hr1G017430.8 , HORVU2Hr1G017470.1 , HORVU2Hr1G017470.3 , HORVU2Hr1G017470.2 , HORVU2Hr1G017470.5 , HORVU2Hr1G017470.4 , HORVU2Hr1G017470.7 , HORVU2Hr1G017470.6 , HORVU2Hr1G017470.9 , HORVU2Hr1G017470.8 , HORVU6Hr1G015950.1 , HORVU3Hr1G094170.1 , HORVU7Hr1G012760.10 , HORVU0Hr1G011330.2 , HORVU0Hr1G011330.1 , HORVU4Hr1G017430.11 , HORVU4Hr1G017430.10 , HORVU7Hr1G012740.1 , HORVU1Hr1G063740.3 , HORVU1Hr1G063740.2 , HORVU1Hr1G063740.1 , HORVU1Hr1G063740.7 , HORVU1Hr1G063740.6 , HORVU1Hr1G063740.5 , HORVU1Hr1G063740.4 , HORVU1Hr1G063740.9 , HORVU1Hr1G063740.8 , HORVU2Hr1G017460.10 , HORVU1Hr1G063730.1 , HORVU3Hr1G032680.2 , HORVU3Hr1G032680.1 , HORVU7Hr1G012760.3 , HORVU7Hr1G012760.2 , HORVU7Hr1G012760.7 , HORVU7Hr1G012760.6 , HORVU7Hr1G012760.5 , HORVU7Hr1G012760.4 , HORVU7Hr1G012760.9 , HORVU7Hr1G012760.8 , HORVU2Hr1G103930.2 , HORVU2Hr1G103930.3 , HORVU2Hr1G103930.1 , HORVU2Hr1G103930.6 , HORVU2Hr1G103930.7 , HORVU2Hr1G103930.4 , HORVU2Hr1G103930.5 , HORVU2Hr1G103930.8 , HORVU2Hr1G103930.9 , HORVU0Hr1G028970.1 , HORVU0Hr1G028970.2 , HORVU0Hr1G028970.3 , HORVU6Hr1G019380.5 , HORVU6Hr1G019380.4 , HORVU6Hr1G019380.3 , HORVU6Hr1G019380.2 , HORVU3Hr1G014140.1 , HORVU3Hr1G014140.3 , HORVU3Hr1G014140.2 , HORVU3Hr1G014140.4 , HORVU0Hr1G026330.4 , HORVU0Hr1G026330.5 , HORVU0Hr1G026330.6 , HORVU0Hr1G026330.7 , HORVU0Hr1G026330.1 , HORVU0Hr1G026330.2 , HORVU4Hr1G051290.5 , HORVU4Hr1G051290.7 , HORVU4Hr1G051290.6 , HORVU4Hr1G051290.1 , HORVU4Hr1G051290.2 , HORVU4Hr1G051290.9 , HORVU4Hr1G051290.8 , HORVU2Hr1G004130.1 , HORVU1Hr1G021800.2 , HORVU1Hr1G021800.3 , HORVU1Hr1G021800.1 , HORVU2Hr1G017470.15 , HORVU2Hr1G017470.14 , HORVU2Hr1G017470.16 , HORVU2Hr1G017470.11 , HORVU2Hr1G017470.10 , HORVU2Hr1G017470.13 , HORVU2Hr1G017470.12 , HORVU4Hr1G012030.1 , HORVU4Hr1G012030.2 , HORVU5Hr1G045650.8 , HORVU5Hr1G045650.5 , HORVU5Hr1G045650.4 , HORVU5Hr1G045650.7 , HORVU5Hr1G045650.6 , HORVU5Hr1G045650.1 , HORVU5Hr1G045650.3 , HORVU5Hr1G045650.2 , HORVU2Hr1G017460.8 , HORVU2Hr1G017460.9 , HORVU2Hr1G017460.2 , HORVU2Hr1G017460.3 , HORVU2Hr1G017460.1 , HORVU2Hr1G017460.6 , HORVU2Hr1G017460.7 , HORVU2Hr1G017460.4 , HORVU2Hr1G017460.5 , HORVU5Hr1G020030.1 , HORVU5Hr1G020030.2 , HORVU2Hr1G039640.2 , HORVU4Hr1G089660.1 , HORVU2Hr1G039640.3 , HORVU2Hr1G039640.4
Wheat TraesCS2B02G119000 , TraesCS3B02G194000 , TraesCS5A02G049100 , TraesCS5A02G049100 , TraesCS1D02G263800 , TraesCS3B02G439600 , TraesCS7D02G063300 , TraesCS2D02G101300 , TraesCS2B02G228900 , TraesCS5A02G143200 , TraesCS4A02G421200 , TraesCS6A02G237900 , TraesCS6A02G108300 , TraesCS6A02G108300 , TraesCS2A02G462500 , TraesCS4B02G173600 , TraesCS4D02G175700 , TraesCS3B02G093300 , TraesCS3D02G401200 , TraesCS4A02G420200 , TraesCS5D02G148800 , TraesCS2A02G201800 , TraesCS2A02G201800 , TraesCS2A02G101900 , TraesCS2B02G119100 , TraesCS3D02G078900 , TraesCS3A02G406000 , TraesCS7D02G062600 , TraesCS2D02G101400 , TraesCS4A02G131000 , TraesCS4B02G072400 , TraesCS2A02G102000 , TraesCS1B02G274300 , TraesCS2D02G462900 , TraesCS4A02G242700 , TraesCS4A02G219700 , TraesCS3A02G078400 , TraesCS2B02G228900 , TraesCS4D02G071200 , TraesCS3A02G162900 , TraesCS2D02G214100 , TraesCS5B02G054200 , TraesCS5B02G054200 , TraesCS5D02G059700 , TraesCS5D02G059700 , TraesCS4B02G098200 , TraesCS1A02G263700 , TraesCS3D02G170000 , TraesCS4D02G094400 , TraesCS5B02G142100
Populus -


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cDNA sequences
Sobic.002G420700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G178100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@F-box/Kelch-repeat protein, putative, expressed -
2 Sobic.007G035000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@decarboxylase, putative, expressed K01592: tyrosine decarboxylase
3 Sobic.008G153400 peptidase, putative, expressed K18151: ureidoglycolate amidohydrolase
4 Sobic.003G087200 nuclease PA3, putative, expressed -
5 Sobic.009G114000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Os5bglu22 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed K01188: beta-glucosidase
6 Sobic.001G150600 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K13606: NOL, chlorophyll(ide) b reductase
7 Sobic.006G091700 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
8 Sobic.006G226400 leucoanthocyanidin reductase, putative, expressed -
9 Sobic.001G015500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@inner membrane protein, putative, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
10 Sobic.009G161000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
11 Sobic.005G216000 BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
12 Sobic.003G105800 No apical meristem protein, putative, expressed -
13 Sobic.001G249300 Cf2/Cf5 disease resistance protein, putative, expressed -
14 Sobic.006G030700 receptor kinase, putative, expressed -
15 Sobic.002G085300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
16 Sobic.004G101900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@citrate synthase, putative, expressed K01647: CS, citrate synthase
17 Sobic.002G304000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@nitrilase, putative, expressed K01431: UPB1, beta-ureidopropionase
18 Sobic.006G199000 pathogenesis-related Bet v I family protein, putative, expressed -
19 Sobic.001G280200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsSCP44 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
20 Sobic.009G226300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic002G420700 Sobic002G420700 Sobic005G178100 Sobic005G178100 Sobic002G420700--Sobic005G178100 Sobic007G035000 Sobic007G035000 Sobic002G420700--Sobic007G035000 Sobic008G153400 Sobic008G153400 Sobic002G420700--Sobic008G153400 Sobic003G087200 Sobic003G087200 Sobic002G420700--Sobic003G087200 Sobic009G114000 Sobic009G114000 Sobic002G420700--Sobic009G114000 Sobic001G150600 Sobic001G150600 Sobic002G420700--Sobic001G150600 Sobic006G091700 Sobic006G091700 Sobic002G420700--Sobic006G091700 Sobic006G226400 Sobic006G226400 Sobic002G420700--Sobic006G226400 Sobic001G015500 Sobic001G015500 Sobic002G420700--Sobic001G015500 Sobic009G161000 Sobic009G161000 Sobic005G178100--Sobic009G161000 Sobic001G305800 Sobic001G305800 Sobic005G178100--Sobic001G305800 Sobic005G178100--Sobic003G087200 Sobic005G178100--Sobic002G420700 Sobic005G178100--Sobic001G015500 Sobic003G105800 Sobic003G105800 Sobic005G178100--Sobic003G105800 Sobic009G034700 Sobic009G034700 Sobic005G178100--Sobic009G034700 Sobic003G184900 Sobic003G184900 Sobic005G178100--Sobic003G184900 Sobic005G178100--Sobic001G150600 Sobic007G035000--Sobic002G420700 Sobic005G216000 Sobic005G216000 Sobic007G035000--Sobic005G216000 Sobic007G035000--Sobic005G178100 Sobic007G035000--Sobic003G105800 Sobic007G035000--Sobic003G087200 Sobic004G071200 Sobic004G071200 Sobic007G035000--Sobic004G071200 Sobic003G244600 Sobic003G244600 Sobic007G035000--Sobic003G244600 Sobic007G035000--Sobic009G114000 Sobic007G035000--Sobic009G034700 Sobic008G153400--Sobic001G150600 Sobic006G199000 Sobic006G199000 Sobic008G153400--Sobic006G199000 Sobic006G030700 Sobic006G030700 Sobic008G153400--Sobic006G030700 Sobic001G325200 Sobic001G325200 Sobic008G153400--Sobic001G325200 Sobic003G398100 Sobic003G398100 Sobic008G153400--Sobic003G398100 Sobic003G257100 Sobic003G257100 Sobic008G153400--Sobic003G257100 Sobic008G153400--Sobic003G087200 Sobic008G153400--Sobic006G091700 Sobic009G226300 Sobic009G226300 Sobic008G153400--Sobic009G226300 Sobic003G087200--Sobic001G150600 Sobic006G100332 Sobic006G100332 Sobic003G087200--Sobic006G100332 Sobic004G321800 Sobic004G321800 Sobic003G087200--Sobic004G321800 Sobic003G087200--Sobic006G030700 Sobic003G087200--Sobic009G226300 Sobic003G087200--Sobic006G091700 Sobic003G148800 Sobic003G148800 Sobic003G087200--Sobic003G148800 Sobic003G087200--Sobic008G153400 Sobic003G087200--Sobic009G114000 Sobic009G114000--Sobic006G091700 Sobic009G114000--Sobic003G087200 Sobic009G114000--Sobic006G226400 Sobic006G181300 Sobic006G181300 Sobic009G114000--Sobic006G181300 Sobic002G085300 Sobic002G085300 Sobic009G114000--Sobic002G085300 Sobic009G114000--Sobic001G150600 Sobic001G069900 Sobic001G069900 Sobic009G114000--Sobic001G069900 Sobic002G122800 Sobic002G122800 Sobic009G114000--Sobic002G122800 Sobic009G114000--Sobic006G030700 Sobic001G150600--Sobic003G087200 Sobic001G150600--Sobic006G100332 Sobic001G150600--Sobic008G153400 Sobic001G150600--Sobic006G030700 Sobic001G150600--Sobic009G226300 Sobic001G150600--Sobic003G148800 Sobic001G150600--Sobic001G325200 Sobic009G054500 Sobic009G054500 Sobic001G150600--Sobic009G054500 Sobic001G150600--Sobic004G321800 Sobic006G091700--Sobic009G114000 Sobic006G091700--Sobic003G087200 Sobic006G091700--Sobic001G150600 Sobic006G091700--Sobic002G085300 Sobic006G091700--Sobic001G015500 Sobic006G091700--Sobic008G153400 Sobic006G091700--Sobic006G030700 Sobic006G091700--Sobic006G199000 Sobic006G091700--Sobic001G069900 Sobic004G320600 Sobic004G320600 Sobic006G226400--Sobic004G320600 Sobic006G226400--Sobic003G087200 Sobic006G226400--Sobic009G114000 Sobic006G226400--Sobic001G150600 Sobic007G092900 Sobic007G092900 Sobic006G226400--Sobic007G092900 Sobic006G226400--Sobic006G091700 Sobic006G226400--Sobic004G321800 Sobic007G093000 Sobic007G093000 Sobic006G226400--Sobic007G093000 Sobic006G226400--Sobic002G420700 Sobic001G015500--Sobic001G069900 Sobic001G015500--Sobic001G325200 Sobic001G015500--Sobic006G091700 Sobic001G015500--Sobic003G087200 Sobic004G101900 Sobic004G101900 Sobic001G015500--Sobic004G101900 Sobic001G015500--Sobic005G178100 Sobic004G124200 Sobic004G124200 Sobic001G015500--Sobic004G124200 Sobic001G015500--Sobic001G150600 Sobic007G186200 Sobic007G186200 Sobic001G015500--Sobic007G186200
Octagon: transcription factors


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