Gene annotation
Transcriptome id Sobic.002G122800.1,Sobic.002G122800.2
Synonym
Functional annotation expressed protein
UniProt A0A1B6QAU8
Pfam PF11779
Panther DB PTHR33727
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G06515 : Protein of unknown function (DUF3317)
RAP-DB (Rice) LOC_Os07g26550.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G114000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Os5bglu22 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed K01188: beta-glucosidase
2 Sobic.003G111200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PIII1 - Proteinase inhibitor II family protein precursor, expressed -
3 Sobic.003G203200 hypothetical protein -
4 Sobic.005G169400 WIP5 - Wound-induced protein precursor, expressed -
5 Sobic.001G316400 heavy metal-associated domain containing protein, expressed -
6 Sobic.001G354400 O-methyltransferase, putative, expressed -
7 Sobic.006G181300 Polyphenol oxidas(PubMedID : 28818380)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@polyphenol oxidase, putative, expressed K00422: polyphenol oxidase
8 Sobic.006G091700 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
9 Sobic.002G085300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
10 Sobic.006G226400 leucoanthocyanidin reductase, putative, expressed -
11 Sobic.001G069900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase
12 Sobic.003G111300 PIII1 - Proteinase inhibitor II family protein precursor, expressed -
13 Sobic.009G207600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@dnaJ domain containing protein, expressed -
14 Sobic.003G087200 nuclease PA3, putative, expressed -
15 Sobic.005G024700 major facilitator superfamily antiporter, putative, expressed -
16 Sobic.001G504900 pheophorbide a oxygenase, chloroplast precursor, putative, expressed K13071: PAO, pheophorbide a oxygenase
17 Sobic.003G244600 similar to PRm 3(PubMedID : 29862293)@glycosyl hydrolase, putative, expressed K01183: chitinase
18 Sobic.004G321800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@saccharopine dehydrogenase, putative, expressed K14157: alpha-aminoadipic semialdehyde synthase
19 Sobic.001G015500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@inner membrane protein, putative, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
20 Sobic.003G204501 - -


Gene co-expression network
sample Sobic002G122800 Sobic002G122800 Sobic009G114000 Sobic009G114000 Sobic002G122800--Sobic009G114000 Sobic003G111200 Sobic003G111200 Sobic002G122800--Sobic003G111200 Sobic003G203200 Sobic003G203200 Sobic002G122800--Sobic003G203200 Sobic005G169400 Sobic005G169400 Sobic002G122800--Sobic005G169400 Sobic001G316400 Sobic001G316400 Sobic002G122800--Sobic001G316400 Sobic001G354400 Sobic001G354400 Sobic002G122800--Sobic001G354400 Sobic006G181300 Sobic006G181300 Sobic002G122800--Sobic006G181300 Sobic006G091700 Sobic006G091700 Sobic002G122800--Sobic006G091700 Sobic002G085300 Sobic002G085300 Sobic002G122800--Sobic002G085300 Sobic009G114000--Sobic006G091700 Sobic003G087200 Sobic003G087200 Sobic009G114000--Sobic003G087200 Sobic006G226400 Sobic006G226400 Sobic009G114000--Sobic006G226400 Sobic009G114000--Sobic006G181300 Sobic009G114000--Sobic002G085300 Sobic001G150600 Sobic001G150600 Sobic009G114000--Sobic001G150600 Sobic001G069900 Sobic001G069900 Sobic009G114000--Sobic001G069900 Sobic009G114000--Sobic002G122800 Sobic006G030700 Sobic006G030700 Sobic009G114000--Sobic006G030700 Sobic003G111200--Sobic005G169400 Sobic003G111200--Sobic002G122800 Sobic003G111200--Sobic009G114000 Sobic003G111300 Sobic003G111300 Sobic003G111200--Sobic003G111300 Sobic003G111200--Sobic006G226400 Sobic002G023300 Sobic002G023300 Sobic003G111200--Sobic002G023300 Sobic002G084600 Sobic002G084600 Sobic003G111200--Sobic002G084600 Sobic007G163901 Sobic007G163901 Sobic003G111200--Sobic007G163901 Sobic004G321800 Sobic004G321800 Sobic003G111200--Sobic004G321800 Sobic003G203200--Sobic002G122800 Sobic003G203200--Sobic001G354400 Sobic003G203200--Sobic001G316400 Sobic005G043900 Sobic005G043900 Sobic003G203200--Sobic005G043900 Sobic003G203200--Sobic009G114000 Sobic003G203200--Sobic006G091700 Sobic003G203200--Sobic002G085300 Sobic003G203200--Sobic006G181300 Sobic006G246600 Sobic006G246600 Sobic003G203200--Sobic006G246600 Sobic005G169400--Sobic003G111200 Sobic005G169400--Sobic009G114000 Sobic005G169400--Sobic004G321800 Sobic005G169400--Sobic006G226400 Sobic005G169400--Sobic003G087200 Sobic004G320600 Sobic004G320600 Sobic005G169400--Sobic004G320600 Sobic008G079300 Sobic008G079300 Sobic005G169400--Sobic008G079300 Sobic003G244600 Sobic003G244600 Sobic005G169400--Sobic003G244600 Sobic005G169400--Sobic001G069900 Sobic001G316400--Sobic003G203200 Sobic001G316400--Sobic002G122800 Sobic008G074400 Sobic008G074400 Sobic001G316400--Sobic008G074400 Sobic001G316400--Sobic006G181300 Sobic001G504900 Sobic001G504900 Sobic001G316400--Sobic001G504900 Sobic001G316400--Sobic002G085300 Sobic001G316400--Sobic009G114000 Sobic001G316400--Sobic006G091700 Sobic001G316400--Sobic001G354400 Sobic001G354400--Sobic003G203200 Sobic001G354400--Sobic002G122800 Sobic001G354400--Sobic001G316400 Sobic001G354400--Sobic006G181300 Sobic001G354400--Sobic006G246600 Sobic004G226100 Sobic004G226100 Sobic001G354400--Sobic004G226100 Sobic001G354400--Sobic005G169400 Sobic001G354400--Sobic009G114000 Sobic008G048900 Sobic008G048900 Sobic001G354400--Sobic008G048900 Sobic006G181300--Sobic001G069900 Sobic006G181300--Sobic003G087200 Sobic006G181300--Sobic009G114000 Sobic006G181300--Sobic006G091700 Sobic006G181300--Sobic004G321800 Sobic009G207600 Sobic009G207600 Sobic006G181300--Sobic009G207600 Sobic001G015500 Sobic001G015500 Sobic006G181300--Sobic001G015500 Sobic006G181300--Sobic008G079300 Sobic006G181300--Sobic001G150600 Sobic006G091700--Sobic009G114000 Sobic006G091700--Sobic003G087200 Sobic006G091700--Sobic001G150600 Sobic006G091700--Sobic002G085300 Sobic006G091700--Sobic001G015500 Sobic008G153400 Sobic008G153400 Sobic006G091700--Sobic008G153400 Sobic006G091700--Sobic006G030700 Sobic006G199000 Sobic006G199000 Sobic006G091700--Sobic006G199000 Sobic006G091700--Sobic001G069900 Sobic002G085300--Sobic006G091700 Sobic002G085300--Sobic009G114000 Sobic002G420700 Sobic002G420700 Sobic002G085300--Sobic002G420700 Sobic002G085300--Sobic003G087200 Sobic002G085300--Sobic001G015500 Sobic002G085300--Sobic001G150600 Sobic002G085300--Sobic008G153400 Sobic002G085300--Sobic001G069900 Sobic001G150650 Sobic001G150650 Sobic002G085300--Sobic001G150650
Octagon: transcription factors


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