Gene annotation
Transcriptome id Sobic.001G354400.1
Synonym
Functional annotation O-methyltransferase, putative, expressed
UniProt C5WYJ6
Pfam PF08100 PF00891
Panther DB PTHR11746 PTHR11746:SF86
NCBI CDD KOG3178; Hydroxyindole-O-methyltransferase and related SAM-dependent methyltransferases
KEGG Orthology -
Gene Ontology GO:0008171; O-methyltransferase activity


Orthologs (automatic annotation)
TAIR AT4G35160 : O-methyltransferase family protein
RAP-DB (Rice) LOC_Os05g43940.1 : O-methyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a002686 , Zm00025a002689 , Zm00025a013023 , Zm00025a002685 , Zm00025a052083
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G203200 hypothetical protein -
2 Sobic.002G122800 expressed protein -
3 Sobic.001G316400 heavy metal-associated domain containing protein, expressed -
4 Sobic.006G181300 Polyphenol oxidas(PubMedID : 28818380)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@polyphenol oxidase, putative, expressed K00422: polyphenol oxidase
5 Sobic.006G246600 DUF538 domain containing protein, putative, expressed -
6 Sobic.004G226100 RIPER1 - Ripening-related family protein precursor, expressed -
7 Sobic.005G169400 WIP5 - Wound-induced protein precursor, expressed -
8 Sobic.009G114000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Os5bglu22 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed K01188: beta-glucosidase
9 Sobic.008G048900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@citrate-binding protein precursor, putative, expressed -
10 Sobic.008G009200 SAG20, putative, expressed -
11 Sobic.008G074400 glutathione S-transferase, putative, expressed K01800: maiA, maleylacetoacetate isomerase
12 Sobic.005G043900 protein kinase domain containing protein, expressed -
13 Sobic.001G069900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase
14 Sobic.002G089100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF538 domain containing protein, putative, expressed -
15 Sobic.006G091700 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
16 Sobic.008G048800 citrate-binding protein precursor, putative, expressed -
17 Sobic.001G359500 cytochrome P450, putative, expressed -
18 Sobic.003G111200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PIII1 - Proteinase inhibitor II family protein precursor, expressed -
19 Sobic.004G008800 sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
20 Sobic.002G085300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -


Gene co-expression network
sample Sobic001G354400 Sobic001G354400 Sobic003G203200 Sobic003G203200 Sobic001G354400--Sobic003G203200 Sobic002G122800 Sobic002G122800 Sobic001G354400--Sobic002G122800 Sobic001G316400 Sobic001G316400 Sobic001G354400--Sobic001G316400 Sobic006G181300 Sobic006G181300 Sobic001G354400--Sobic006G181300 Sobic006G246600 Sobic006G246600 Sobic001G354400--Sobic006G246600 Sobic004G226100 Sobic004G226100 Sobic001G354400--Sobic004G226100 Sobic005G169400 Sobic005G169400 Sobic001G354400--Sobic005G169400 Sobic009G114000 Sobic009G114000 Sobic001G354400--Sobic009G114000 Sobic008G048900 Sobic008G048900 Sobic001G354400--Sobic008G048900 Sobic003G203200--Sobic002G122800 Sobic003G203200--Sobic001G354400 Sobic003G203200--Sobic001G316400 Sobic005G043900 Sobic005G043900 Sobic003G203200--Sobic005G043900 Sobic003G203200--Sobic009G114000 Sobic006G091700 Sobic006G091700 Sobic003G203200--Sobic006G091700 Sobic002G085300 Sobic002G085300 Sobic003G203200--Sobic002G085300 Sobic003G203200--Sobic006G181300 Sobic003G203200--Sobic006G246600 Sobic002G122800--Sobic009G114000 Sobic003G111200 Sobic003G111200 Sobic002G122800--Sobic003G111200 Sobic002G122800--Sobic003G203200 Sobic002G122800--Sobic005G169400 Sobic002G122800--Sobic001G316400 Sobic002G122800--Sobic001G354400 Sobic002G122800--Sobic006G181300 Sobic002G122800--Sobic006G091700 Sobic002G122800--Sobic002G085300 Sobic001G316400--Sobic003G203200 Sobic001G316400--Sobic002G122800 Sobic008G074400 Sobic008G074400 Sobic001G316400--Sobic008G074400 Sobic001G316400--Sobic006G181300 Sobic001G504900 Sobic001G504900 Sobic001G316400--Sobic001G504900 Sobic001G316400--Sobic002G085300 Sobic001G316400--Sobic009G114000 Sobic001G316400--Sobic006G091700 Sobic001G316400--Sobic001G354400 Sobic001G069900 Sobic001G069900 Sobic006G181300--Sobic001G069900 Sobic003G087200 Sobic003G087200 Sobic006G181300--Sobic003G087200 Sobic006G181300--Sobic009G114000 Sobic006G181300--Sobic006G091700 Sobic004G321800 Sobic004G321800 Sobic006G181300--Sobic004G321800 Sobic009G207600 Sobic009G207600 Sobic006G181300--Sobic009G207600 Sobic001G015500 Sobic001G015500 Sobic006G181300--Sobic001G015500 Sobic008G079300 Sobic008G079300 Sobic006G181300--Sobic008G079300 Sobic001G150600 Sobic001G150600 Sobic006G181300--Sobic001G150600 Sobic002G013000 Sobic002G013000 Sobic006G246600--Sobic002G013000 Sobic002G089100 Sobic002G089100 Sobic006G246600--Sobic002G089100 Sobic006G246600--Sobic005G043900 Sobic003G204501 Sobic003G204501 Sobic006G246600--Sobic003G204501 Sobic006G246600--Sobic003G203200 Sobic002G088900 Sobic002G088900 Sobic006G246600--Sobic002G088900 Sobic006G246600--Sobic001G316400 Sobic006G246600--Sobic001G354400 Sobic006G246600--Sobic008G048900 Sobic007G034000 Sobic007G034000 Sobic004G226100--Sobic007G034000 Sobic004G226100--Sobic001G354400 Sobic004G226100--Sobic001G316400 Sobic007G092700 Sobic007G092700 Sobic004G226100--Sobic007G092700 Sobic004G226100--Sobic002G122800 Sobic004G226100--Sobic003G203200 Sobic004G226100--Sobic001G069900 Sobic004G226100--Sobic006G181300 Sobic004G226100--Sobic002G085300 Sobic005G169400--Sobic003G111200 Sobic005G169400--Sobic009G114000 Sobic005G169400--Sobic004G321800 Sobic006G226400 Sobic006G226400 Sobic005G169400--Sobic006G226400 Sobic005G169400--Sobic003G087200 Sobic004G320600 Sobic004G320600 Sobic005G169400--Sobic004G320600 Sobic005G169400--Sobic008G079300 Sobic003G244600 Sobic003G244600 Sobic005G169400--Sobic003G244600 Sobic005G169400--Sobic001G069900 Sobic009G114000--Sobic006G091700 Sobic009G114000--Sobic003G087200 Sobic009G114000--Sobic006G226400 Sobic009G114000--Sobic006G181300 Sobic009G114000--Sobic002G085300 Sobic009G114000--Sobic001G150600 Sobic009G114000--Sobic001G069900 Sobic009G114000--Sobic002G122800 Sobic006G030700 Sobic006G030700 Sobic009G114000--Sobic006G030700 Sobic001G247550 Sobic001G247550 Sobic008G048900--Sobic001G247550 Sobic008G048900--Sobic006G246600 Sobic007G198500 Sobic007G198500 Sobic008G048900--Sobic007G198500 Sobic005G043600 Sobic005G043600 Sobic008G048900--Sobic005G043600 Sobic008G048900--Sobic005G043900 Sobic008G048900--Sobic001G354400 Sobic008G048900--Sobic003G203200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.