Gene annotation
Transcriptome id Sobic.001G316400.1
Synonym Sb01g030730
Functional annotation heavy metal-associated domain containing protein, expressed
UniProt A0A1Z5S8K6
Pfam PF00403
Panther DB PTHR22814 PTHR22814:SF92
NCBI CDD KOG1603; Copper chaperone
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G01490 : Heavy metal transport/detoxification superfamily protein
RAP-DB (Rice) LOC_Os10g38870.1 : heavy metal-associated domain containing protein, expressed
MaizeGDB (Corn) Zm00025a000354 , Zm00025a003120
Brachypodium KQJ97568 , KQK23886 , KQK23885
Barley HORVU1Hr1G049420.6 , HORVU1Hr1G049420.7 , HORVU1Hr1G049420.4 , HORVU1Hr1G049420.3 , HORVU1Hr1G049420.1 , HORVU1Hr1G049420.5 , HORVU4Hr1G083100.4 , HORVU4Hr1G083100.5 , HORVU4Hr1G083100.2 , HORVU4Hr1G083100.3 , HORVU4Hr1G083100.1
Wheat TraesCS4D02G316400 , TraesCS4D02G316400 , TraesCS1D02G190700 , TraesCS1A02G185700 , TraesCS5A02G492100 , TraesCS4B02G319800 , TraesCS4B02G319800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G203200 hypothetical protein -
2 Sobic.002G122800 expressed protein -
3 Sobic.008G074400 glutathione S-transferase, putative, expressed K01800: maiA, maleylacetoacetate isomerase
4 Sobic.006G181300 Polyphenol oxidas(PubMedID : 28818380)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@polyphenol oxidase, putative, expressed K00422: polyphenol oxidase
5 Sobic.001G504900 pheophorbide a oxygenase, chloroplast precursor, putative, expressed K13071: PAO, pheophorbide a oxygenase
6 Sobic.002G085300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
7 Sobic.009G114000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Os5bglu22 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed K01188: beta-glucosidase
8 Sobic.006G091700 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
9 Sobic.001G354400 O-methyltransferase, putative, expressed -
10 Sobic.001G069900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase
11 Sobic.003G204501 - -
12 Sobic.009G207600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@dnaJ domain containing protein, expressed -
13 Sobic.006G246600 DUF538 domain containing protein, putative, expressed -
14 Sobic.004G225200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein nitrilase 4 NIT4 (Os)(PubMedID : 27208977)@nitrilase, putative, expressed K13035: beta-cyano-L-alanine hydratase/nitrilase
15 Sobic.008G048800 citrate-binding protein precursor, putative, expressed -
16 Sobic.002G130000 dehydrodolichyl diphosphate synthase, putative, expressed K11778: DHDDS, RER2, ditrans,polycis-polyprenyl diphosphate synthase
17 Sobic.003G087200 nuclease PA3, putative, expressed -
18 Sobic.001G015500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@inner membrane protein, putative, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
19 Sobic.002G089100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF538 domain containing protein, putative, expressed -
20 Sobic.006G226400 leucoanthocyanidin reductase, putative, expressed -


Gene co-expression network
sample Sobic001G316400 Sobic001G316400 Sobic003G203200 Sobic003G203200 Sobic001G316400--Sobic003G203200 Sobic002G122800 Sobic002G122800 Sobic001G316400--Sobic002G122800 Sobic008G074400 Sobic008G074400 Sobic001G316400--Sobic008G074400 Sobic006G181300 Sobic006G181300 Sobic001G316400--Sobic006G181300 Sobic001G504900 Sobic001G504900 Sobic001G316400--Sobic001G504900 Sobic002G085300 Sobic002G085300 Sobic001G316400--Sobic002G085300 Sobic009G114000 Sobic009G114000 Sobic001G316400--Sobic009G114000 Sobic006G091700 Sobic006G091700 Sobic001G316400--Sobic006G091700 Sobic001G354400 Sobic001G354400 Sobic001G316400--Sobic001G354400 Sobic003G203200--Sobic002G122800 Sobic003G203200--Sobic001G354400 Sobic003G203200--Sobic001G316400 Sobic005G043900 Sobic005G043900 Sobic003G203200--Sobic005G043900 Sobic003G203200--Sobic009G114000 Sobic003G203200--Sobic006G091700 Sobic003G203200--Sobic002G085300 Sobic003G203200--Sobic006G181300 Sobic006G246600 Sobic006G246600 Sobic003G203200--Sobic006G246600 Sobic002G122800--Sobic009G114000 Sobic003G111200 Sobic003G111200 Sobic002G122800--Sobic003G111200 Sobic002G122800--Sobic003G203200 Sobic005G169400 Sobic005G169400 Sobic002G122800--Sobic005G169400 Sobic002G122800--Sobic001G316400 Sobic002G122800--Sobic001G354400 Sobic002G122800--Sobic006G181300 Sobic002G122800--Sobic006G091700 Sobic002G122800--Sobic002G085300 Sobic008G074400--Sobic001G316400 Sobic004G225100 Sobic004G225100 Sobic008G074400--Sobic004G225100 Sobic001G069900 Sobic001G069900 Sobic008G074400--Sobic001G069900 Sobic008G074400--Sobic006G181300 Sobic002G338100 Sobic002G338100 Sobic008G074400--Sobic002G338100 Sobic002G087800 Sobic002G087800 Sobic008G074400--Sobic002G087800 Sobic001G359500 Sobic001G359500 Sobic008G074400--Sobic001G359500 Sobic008G074400--Sobic006G091700 Sobic008G074400--Sobic001G504900 Sobic006G181300--Sobic001G069900 Sobic003G087200 Sobic003G087200 Sobic006G181300--Sobic003G087200 Sobic006G181300--Sobic009G114000 Sobic006G181300--Sobic006G091700 Sobic004G321800 Sobic004G321800 Sobic006G181300--Sobic004G321800 Sobic009G207600 Sobic009G207600 Sobic006G181300--Sobic009G207600 Sobic001G015500 Sobic001G015500 Sobic006G181300--Sobic001G015500 Sobic008G079300 Sobic008G079300 Sobic006G181300--Sobic008G079300 Sobic001G150600 Sobic001G150600 Sobic006G181300--Sobic001G150600 Sobic001G504900--Sobic009G207600 Sobic003G398100 Sobic003G398100 Sobic001G504900--Sobic003G398100 Sobic004G261900 Sobic004G261900 Sobic001G504900--Sobic004G261900 Sobic005G149700 Sobic005G149700 Sobic001G504900--Sobic005G149700 Sobic002G266000 Sobic002G266000 Sobic001G504900--Sobic002G266000 Sobic001G504900--Sobic002G338100 Sobic001G504900--Sobic001G069900 Sobic001G504900--Sobic006G181300 Sobic001G504900--Sobic001G015500 Sobic002G085300--Sobic006G091700 Sobic002G085300--Sobic009G114000 Sobic002G420700 Sobic002G420700 Sobic002G085300--Sobic002G420700 Sobic002G085300--Sobic003G087200 Sobic002G085300--Sobic001G015500 Sobic002G085300--Sobic001G150600 Sobic008G153400 Sobic008G153400 Sobic002G085300--Sobic008G153400 Sobic002G085300--Sobic001G069900 Sobic001G150650 Sobic001G150650 Sobic002G085300--Sobic001G150650 Sobic009G114000--Sobic006G091700 Sobic009G114000--Sobic003G087200 Sobic006G226400 Sobic006G226400 Sobic009G114000--Sobic006G226400 Sobic009G114000--Sobic006G181300 Sobic009G114000--Sobic002G085300 Sobic009G114000--Sobic001G150600 Sobic009G114000--Sobic001G069900 Sobic009G114000--Sobic002G122800 Sobic006G030700 Sobic006G030700 Sobic009G114000--Sobic006G030700 Sobic006G091700--Sobic009G114000 Sobic006G091700--Sobic003G087200 Sobic006G091700--Sobic001G150600 Sobic006G091700--Sobic002G085300 Sobic006G091700--Sobic001G015500 Sobic006G091700--Sobic008G153400 Sobic006G091700--Sobic006G030700 Sobic006G199000 Sobic006G199000 Sobic006G091700--Sobic006G199000 Sobic006G091700--Sobic001G069900 Sobic001G354400--Sobic003G203200 Sobic001G354400--Sobic002G122800 Sobic001G354400--Sobic001G316400 Sobic001G354400--Sobic006G181300 Sobic001G354400--Sobic006G246600 Sobic004G226100 Sobic004G226100 Sobic001G354400--Sobic004G226100 Sobic001G354400--Sobic005G169400 Sobic001G354400--Sobic009G114000 Sobic008G048900 Sobic008G048900 Sobic001G354400--Sobic008G048900
Octagon: transcription factors


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