Gene annotation
Transcriptome id Sobic.007G163901.1
Synonym -
Functional annotation -
UniProt A0A1Z5RA83
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G084600 - -
2 Sobic.003G111200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PIII1 - Proteinase inhibitor II family protein precursor, expressed -
3 Sobic.006G226400 leucoanthocyanidin reductase, putative, expressed -
4 Sobic.003G061400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@basic helix-loop-helix, putative, expressed -
5 Sobic.010G135900 - -
6 Sobic.005G169400 WIP5 - Wound-induced protein precursor, expressed -
7 Sobic.009G114000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Os5bglu22 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed K01188: beta-glucosidase
8 Sobic.002G190500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@alpha-amylase precursor, putative, expressed K01176: AMY, amyA, alpha-amylase
9 Sobic.004G320600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyltransferase, putative, expressed -
10 Sobic.004G321800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@saccharopine dehydrogenase, putative, expressed K14157: alpha-aminoadipic semialdehyde synthase
11 Sobic.009G207600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@dnaJ domain containing protein, expressed -
12 Sobic.002G087800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@1-aminocyclopropane-1-carboxylate oxidase 2, putative, expressed -
13 Sobic.005G178100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@F-box/Kelch-repeat protein, putative, expressed -
14 Sobic.001G504900 pheophorbide a oxygenase, chloroplast precursor, putative, expressed K13071: PAO, pheophorbide a oxygenase
15 Sobic.009G107600 inhibitor I family protein, putative, expressed -
16 Sobic.002G324000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@isocitrate lyase, putative, expressed K01637: E4.1.3.1, isocitrate lyase
17 Sobic.008G053900 citrate-binding protein precursor, putative, expressed -
18 Sobic.003G087200 nuclease PA3, putative, expressed -
19 Sobic.004G345800 Peroxisomal 3-ketoacyl-CoA thiolase 3 PKT3 (At)(PubMedID : 27208977)@3-ketoacyl-CoA thiolase, peroxisomal precursor, putative, expressed K07513: acetyl-CoA acyltransferase 1
20 Sobic.007G092900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic007G163901 Sobic007G163901 Sobic002G084600 Sobic002G084600 Sobic007G163901--Sobic002G084600 Sobic003G111200 Sobic003G111200 Sobic007G163901--Sobic003G111200 Sobic006G226400 Sobic006G226400 Sobic007G163901--Sobic006G226400 Sobic003G061400 Sobic003G061400 Sobic007G163901--Sobic003G061400 Sobic010G135900 Sobic010G135900 Sobic007G163901--Sobic010G135900 Sobic005G169400 Sobic005G169400 Sobic007G163901--Sobic005G169400 Sobic009G114000 Sobic009G114000 Sobic007G163901--Sobic009G114000 Sobic002G190500 Sobic002G190500 Sobic007G163901--Sobic002G190500 Sobic004G320600 Sobic004G320600 Sobic007G163901--Sobic004G320600 Sobic009G058200 Sobic009G058200 Sobic002G084600--Sobic009G058200 Sobic008G053900 Sobic008G053900 Sobic002G084600--Sobic008G053900 Sobic006G225700 Sobic006G225700 Sobic002G084600--Sobic006G225700 Sobic002G084600--Sobic007G163901 Sobic002G084600--Sobic003G111200 Sobic009G107600 Sobic009G107600 Sobic002G084600--Sobic009G107600 Sobic008G028800 Sobic008G028800 Sobic002G084600--Sobic008G028800 Sobic002G084600--Sobic005G169400 Sobic004G227550 Sobic004G227550 Sobic002G084600--Sobic004G227550 Sobic003G111200--Sobic005G169400 Sobic002G122800 Sobic002G122800 Sobic003G111200--Sobic002G122800 Sobic003G111200--Sobic009G114000 Sobic003G111300 Sobic003G111300 Sobic003G111200--Sobic003G111300 Sobic003G111200--Sobic006G226400 Sobic002G023300 Sobic002G023300 Sobic003G111200--Sobic002G023300 Sobic003G111200--Sobic002G084600 Sobic003G111200--Sobic007G163901 Sobic004G321800 Sobic004G321800 Sobic003G111200--Sobic004G321800 Sobic006G226400--Sobic004G320600 Sobic003G087200 Sobic003G087200 Sobic006G226400--Sobic003G087200 Sobic006G226400--Sobic009G114000 Sobic001G150600 Sobic001G150600 Sobic006G226400--Sobic001G150600 Sobic007G092900 Sobic007G092900 Sobic006G226400--Sobic007G092900 Sobic006G091700 Sobic006G091700 Sobic006G226400--Sobic006G091700 Sobic006G226400--Sobic004G321800 Sobic007G093000 Sobic007G093000 Sobic006G226400--Sobic007G093000 Sobic002G420700 Sobic002G420700 Sobic006G226400--Sobic002G420700 Sobic004G333200 Sobic004G333200 Sobic003G061400--Sobic004G333200 Sobic010G176700 Sobic010G176700 Sobic003G061400--Sobic010G176700 Sobic003G442500 Sobic003G442500 Sobic003G061400--Sobic003G442500 Sobic001G132000 Sobic001G132000 Sobic003G061400--Sobic001G132000 Sobic005G215900 Sobic005G215900 Sobic003G061400--Sobic005G215900 Sobic010G210200 Sobic010G210200 Sobic003G061400--Sobic010G210200 Sobic005G024900 Sobic005G024900 Sobic003G061400--Sobic005G024900 Sobic009G016800 Sobic009G016800 Sobic003G061400--Sobic009G016800 Sobic006G127100 Sobic006G127100 Sobic003G061400--Sobic006G127100 Sobic001G176501 Sobic001G176501 Sobic010G135900--Sobic001G176501 Sobic003G174400 Sobic003G174400 Sobic010G135900--Sobic003G174400 Sobic010G135900--Sobic004G321800 Sobic010G135900--Sobic002G190500 Sobic010G135900--Sobic007G092900 Sobic010G135900--Sobic004G320600 Sobic003G138200 Sobic003G138200 Sobic010G135900--Sobic003G138200 Sobic007G187300 Sobic007G187300 Sobic010G135900--Sobic007G187300 Sobic010G135900--Sobic007G093000 Sobic005G169400--Sobic003G111200 Sobic005G169400--Sobic009G114000 Sobic005G169400--Sobic004G321800 Sobic005G169400--Sobic006G226400 Sobic005G169400--Sobic003G087200 Sobic005G169400--Sobic004G320600 Sobic008G079300 Sobic008G079300 Sobic005G169400--Sobic008G079300 Sobic003G244600 Sobic003G244600 Sobic005G169400--Sobic003G244600 Sobic001G069900 Sobic001G069900 Sobic005G169400--Sobic001G069900 Sobic009G114000--Sobic006G091700 Sobic009G114000--Sobic003G087200 Sobic009G114000--Sobic006G226400 Sobic006G181300 Sobic006G181300 Sobic009G114000--Sobic006G181300 Sobic002G085300 Sobic002G085300 Sobic009G114000--Sobic002G085300 Sobic009G114000--Sobic001G150600 Sobic009G114000--Sobic001G069900 Sobic009G114000--Sobic002G122800 Sobic006G030700 Sobic006G030700 Sobic009G114000--Sobic006G030700 Sobic002G324000 Sobic002G324000 Sobic002G190500--Sobic002G324000 Sobic004G113300 Sobic004G113300 Sobic002G190500--Sobic004G113300 Sobic005G130400 Sobic005G130400 Sobic002G190500--Sobic005G130400 Sobic004G050200 Sobic004G050200 Sobic002G190500--Sobic004G050200 Sobic003G184900 Sobic003G184900 Sobic002G190500--Sobic003G184900 Sobic004G345800 Sobic004G345800 Sobic002G190500--Sobic004G345800 Sobic002G190500--Sobic004G321800 Sobic007G216201 Sobic007G216201 Sobic002G190500--Sobic007G216201 Sobic002G190500--Sobic008G079300 Sobic004G320600--Sobic006G226400 Sobic004G320600--Sobic004G321800 Sobic004G320600--Sobic003G087200 Sobic004G320600--Sobic007G092900 Sobic006G100332 Sobic006G100332 Sobic004G320600--Sobic006G100332 Sobic004G320600--Sobic007G093000 Sobic004G320600--Sobic007G187300 Sobic009G226300 Sobic009G226300 Sobic004G320600--Sobic009G226300 Sobic005G178100 Sobic005G178100 Sobic004G320600--Sobic005G178100
Octagon: transcription factors


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