Gene annotation
Transcriptome id Sobic.008G053900.1
Synonym Sb08g004560
Functional annotation citrate-binding protein precursor, putative, expressed
UniProt A0A1B6PBU9
Pfam PF08787
Panther DB PTHR33681 PTHR33681:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os12g07310.1 : citrate-binding protein precursor, putative, expressed
MaizeGDB (Corn) Zm00025a012910
Brachypodium KQJ97843 , KQJ92054 , PNT65375 , KQJ92113
Barley HORVU0Hr1G020380.1 , HORVU3Hr1G020010.1 , HORVU3Hr1G020010.2 , HORVU3Hr1G020010.3 , HORVU3Hr1G020080.1 , HORVU1Hr1G078080.1
Wheat TraesCS7A02G202300 , TraesCS7A02G063000 , TraesCS7A02G063100 , TraesCS7B02G109200 , TraesCS7D02G205700 , TraesCS1D02G328800 , TraesCS1D02G014100 , TraesCS7D02G205600 , TraesCS3B02G129600 , TraesCS1A02G326700 , TraesCS7B02G109300 , TraesCS2B02G088200 , TraesCS7A02G062900 , TraesCS6B02G018200
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G028800 WRKY104, expressed -
2 Sobic.004G227550 - -
3 Sobic.004G227550 - -
4 Sobic.002G084600 - -
5 Sobic.006G225700 expressed protein -
6 Sobic.009G107600 inhibitor I family protein, putative, expressed -
7 Sobic.009G058200 - -
8 Sobic.007G201600 - -
9 Sobic.006G241100 Leucine Rich Repeat domain containing protein, expressed -
10 Sobic.003G111200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PIII1 - Proteinase inhibitor II family protein precursor, expressed -
11 Sobic.007G163901 - -
12 Sobic.009G152180 - -
13 Sobic.010G135900 - -
14 Sobic.005G169400 WIP5 - Wound-induced protein precursor, expressed -
15 Sobic.007G094050 - -
16 Sobic.005G130400 terpene synthase, putative, expressed K15803: (-)-germacrene D synthase
17 Sobic.003G025900 - -
18 Sobic.006G222000 MBTB6 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
19 Sobic.004G217300 expressed protein -
20 Sobic.006G226400 leucoanthocyanidin reductase, putative, expressed -


Gene co-expression network
sample Sobic008G053900 Sobic008G053900 Sobic008G028800 Sobic008G028800 Sobic008G053900--Sobic008G028800 Sobic004G227550 Sobic004G227550 Sobic008G053900--Sobic004G227550 Sobic002G084600 Sobic002G084600 Sobic008G053900--Sobic002G084600 Sobic006G225700 Sobic006G225700 Sobic008G053900--Sobic006G225700 Sobic009G107600 Sobic009G107600 Sobic008G053900--Sobic009G107600 Sobic009G058200 Sobic009G058200 Sobic008G053900--Sobic009G058200 Sobic007G201600 Sobic007G201600 Sobic008G053900--Sobic007G201600 Sobic006G241100 Sobic006G241100 Sobic008G053900--Sobic006G241100 Sobic008G028800--Sobic008G053900 Sobic005G130400 Sobic005G130400 Sobic008G028800--Sobic005G130400 Sobic008G028800--Sobic002G084600 Sobic010G135900 Sobic010G135900 Sobic008G028800--Sobic010G135900 Sobic002G190500 Sobic002G190500 Sobic008G028800--Sobic002G190500 Sobic008G028800--Sobic009G058200 Sobic006G036900 Sobic006G036900 Sobic008G028800--Sobic006G036900 Sobic007G163901 Sobic007G163901 Sobic008G028800--Sobic007G163901 Sobic008G028800--Sobic006G241100 Sobic004G227550--Sobic004G227550 Sobic004G227550--Sobic008G053900 Sobic004G227550--Sobic006G225700 Sobic004G227550--Sobic009G107600 Sobic009G152180 Sobic009G152180 Sobic004G227550--Sobic009G152180 Sobic004G227550--Sobic007G201600 Sobic007G094050 Sobic007G094050 Sobic004G227550--Sobic007G094050 Sobic004G227550--Sobic002G084600 Sobic004G227550--Sobic009G058200 Sobic002G084600--Sobic009G058200 Sobic002G084600--Sobic008G053900 Sobic002G084600--Sobic006G225700 Sobic002G084600--Sobic007G163901 Sobic003G111200 Sobic003G111200 Sobic002G084600--Sobic003G111200 Sobic002G084600--Sobic009G107600 Sobic002G084600--Sobic008G028800 Sobic005G169400 Sobic005G169400 Sobic002G084600--Sobic005G169400 Sobic002G084600--Sobic004G227550 Sobic006G225700--Sobic006G241100 Sobic006G222000 Sobic006G222000 Sobic006G225700--Sobic006G222000 Sobic006G225700--Sobic004G227550 Sobic006G225700--Sobic007G201600 Sobic006G225700--Sobic002G084600 Sobic006G225700--Sobic007G094050 Sobic005G081900 Sobic005G081900 Sobic006G225700--Sobic005G081900 Sobic006G225700--Sobic008G053900 Sobic009G107600--Sobic004G227550 Sobic009G107600--Sobic008G053900 Sobic009G107600--Sobic002G084600 Sobic009G107600--Sobic006G225700 Sobic009G107600--Sobic003G111200 Sobic009G107600--Sobic007G163901 Sobic009G107600--Sobic009G058200 Sobic009G107600--Sobic007G201600 Sobic009G058200--Sobic002G084600 Sobic009G058200--Sobic008G053900 Sobic009G058200--Sobic006G225700 Sobic009G058200--Sobic004G227550 Sobic009G058200--Sobic009G107600 Sobic009G058200--Sobic008G028800 Sobic009G058200--Sobic006G241100 Sobic009G058200--Sobic003G111200 Sobic007G201600--Sobic006G241100 Sobic007G201600--Sobic006G225700 Sobic007G201600--Sobic007G094050 Sobic007G201600--Sobic006G222000 Sobic007G201600--Sobic004G227550 Sobic007G201600--Sobic008G053900 Sobic007G022000 Sobic007G022000 Sobic007G201600--Sobic007G022000 Sobic007G201600--Sobic005G081900 Sobic006G241100--Sobic006G222000 Sobic006G241100--Sobic006G225700 Sobic006G241100--Sobic005G081900 Sobic006G241100--Sobic007G201600 Sobic006G241100--Sobic007G022000 Sobic002G162450 Sobic002G162450 Sobic006G241100--Sobic002G162450 Sobic010G060800 Sobic010G060800 Sobic006G241100--Sobic010G060800 Sobic006G241100--Sobic007G094050 Sobic002G027232 Sobic002G027232 Sobic006G241100--Sobic002G027232
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.