Gene annotation
Transcriptome id Sobic.004G217300.1
Synonym Sb04g026235
Functional annotation expressed protein
UniProt A0A1Z5RNK1
Pfam -
Panther DB PTHR33994 PTHR33994:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g40630.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G053900 citrate-binding protein precursor, putative, expressed -
2 Sobic.004G227550 - -
3 Sobic.004G227550 - -
4 Sobic.009G152180 - -
5 Sobic.008G028800 WRKY104, expressed -
6 Sobic.006G225700 expressed protein -
7 Sobic.002G084600 - -
8 Sobic.001G306600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@red chlorophyll catabolite reductase, putative, expressed K13545: RCCR, red chlorophyll catabolite reductase
9 Sobic.003G175400 ribosomal protein L7Ae, putative, expressed -
10 Sobic.010G218700 OsFBL18 - F-box domain and LRR containing protein, expressed -
11 Sobic.009G107600 inhibitor I family protein, putative, expressed -
12 Sobic.007G201600 - -
13 Sobic.004G211000 OsWAK14 - OsWAK receptor-like protein kinase, expressed -
14 Sobic.004G012300 - -
15 Sobic.003G111200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PIII1 - Proteinase inhibitor II family protein precursor, expressed -
16 Sobic.004G067500 SNI1, putative, expressed -
17 Sobic.009G058200 - -
18 Sobic.002G228100 gibberellin receptor GID1L2, putative, expressed -
19 Sobic.006G241100 Leucine Rich Repeat domain containing protein, expressed -
20 Sobic.007G073500 fatty acid hydroxylase, putative, expressed K14423: plant 4,4-dimethylsterol C-4alpha-methyl-monooxygenase


Gene co-expression network
sample Sobic004G217300 Sobic004G217300 Sobic008G053900 Sobic008G053900 Sobic004G217300--Sobic008G053900 Sobic004G227550 Sobic004G227550 Sobic004G217300--Sobic004G227550 Sobic009G152180 Sobic009G152180 Sobic004G217300--Sobic009G152180 Sobic008G028800 Sobic008G028800 Sobic004G217300--Sobic008G028800 Sobic006G225700 Sobic006G225700 Sobic004G217300--Sobic006G225700 Sobic002G084600 Sobic002G084600 Sobic004G217300--Sobic002G084600 Sobic001G306600 Sobic001G306600 Sobic004G217300--Sobic001G306600 Sobic003G175400 Sobic003G175400 Sobic004G217300--Sobic003G175400 Sobic008G053900--Sobic008G028800 Sobic008G053900--Sobic004G227550 Sobic008G053900--Sobic002G084600 Sobic008G053900--Sobic006G225700 Sobic009G107600 Sobic009G107600 Sobic008G053900--Sobic009G107600 Sobic009G058200 Sobic009G058200 Sobic008G053900--Sobic009G058200 Sobic007G201600 Sobic007G201600 Sobic008G053900--Sobic007G201600 Sobic006G241100 Sobic006G241100 Sobic008G053900--Sobic006G241100 Sobic004G227550--Sobic004G227550 Sobic004G227550--Sobic008G053900 Sobic004G227550--Sobic006G225700 Sobic004G227550--Sobic009G107600 Sobic004G227550--Sobic009G152180 Sobic004G227550--Sobic007G201600 Sobic007G094050 Sobic007G094050 Sobic004G227550--Sobic007G094050 Sobic004G227550--Sobic002G084600 Sobic004G227550--Sobic009G058200 Sobic009G152180--Sobic004G227550 Sobic009G152180--Sobic008G053900 Sobic009G152180--Sobic006G225700 Sobic009G152180--Sobic009G107600 Sobic009G152180--Sobic007G094050 Sobic009G152180--Sobic007G201600 Sobic009G152180--Sobic002G084600 Sobic009G152180--Sobic009G058200 Sobic008G028800--Sobic008G053900 Sobic005G130400 Sobic005G130400 Sobic008G028800--Sobic005G130400 Sobic008G028800--Sobic002G084600 Sobic010G135900 Sobic010G135900 Sobic008G028800--Sobic010G135900 Sobic002G190500 Sobic002G190500 Sobic008G028800--Sobic002G190500 Sobic008G028800--Sobic009G058200 Sobic006G036900 Sobic006G036900 Sobic008G028800--Sobic006G036900 Sobic007G163901 Sobic007G163901 Sobic008G028800--Sobic007G163901 Sobic008G028800--Sobic006G241100 Sobic006G225700--Sobic006G241100 Sobic006G222000 Sobic006G222000 Sobic006G225700--Sobic006G222000 Sobic006G225700--Sobic004G227550 Sobic006G225700--Sobic007G201600 Sobic006G225700--Sobic002G084600 Sobic006G225700--Sobic007G094050 Sobic005G081900 Sobic005G081900 Sobic006G225700--Sobic005G081900 Sobic006G225700--Sobic008G053900 Sobic002G084600--Sobic009G058200 Sobic002G084600--Sobic008G053900 Sobic002G084600--Sobic006G225700 Sobic002G084600--Sobic007G163901 Sobic003G111200 Sobic003G111200 Sobic002G084600--Sobic003G111200 Sobic002G084600--Sobic009G107600 Sobic002G084600--Sobic008G028800 Sobic005G169400 Sobic005G169400 Sobic002G084600--Sobic005G169400 Sobic002G084600--Sobic004G227550 Sobic006G076800 Sobic006G076800 Sobic001G306600--Sobic006G076800 Sobic001G306600--Sobic005G169400 Sobic004G182600 Sobic004G182600 Sobic001G306600--Sobic004G182600 Sobic001G130000 Sobic001G130000 Sobic001G306600--Sobic001G130000 Sobic002G035200 Sobic002G035200 Sobic001G306600--Sobic002G035200 Sobic005G217200 Sobic005G217200 Sobic001G306600--Sobic005G217200 Sobic008G009200 Sobic008G009200 Sobic001G306600--Sobic008G009200 Sobic005G209000 Sobic005G209000 Sobic001G306600--Sobic005G209000 Sobic010G044700 Sobic010G044700 Sobic001G306600--Sobic010G044700 Sobic004G220500 Sobic004G220500 Sobic003G175400--Sobic004G220500 Sobic004G140850 Sobic004G140850 Sobic003G175400--Sobic004G140850 Sobic008G149900 Sobic008G149900 Sobic003G175400--Sobic008G149900 Sobic003G050350 Sobic003G050350 Sobic003G175400--Sobic003G050350 Sobic002G379201 Sobic002G379201 Sobic003G175400--Sobic002G379201 Sobic010G218700 Sobic010G218700 Sobic003G175400--Sobic010G218700 Sobic003G284200 Sobic003G284200 Sobic003G175400--Sobic003G284200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.