Gene annotation
Transcriptome id Sobic.004G012300.1
Synonym
Functional annotation -
UniProt A0A194YM68
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g55710.1 : transposon protein, putative, unclassified, expressed
MaizeGDB (Corn) Zm00025a009509
Brachypodium -
Barley HORVU5Hr1G066640.1 , HORVU5Hr1G066640.2 , HORVU2Hr1G113270.1 , HORVU2Hr1G113270.4 , HORVU2Hr1G113270.5 , HORVU2Hr1G113270.7 , HORVU2Hr1G113270.8 , HORVU5Hr1G066660.1 , HORVU4Hr1G027750.1 , HORVU4Hr1G027750.3 , HORVU4Hr1G027750.2 , HORVU2Hr1G113260.1
Wheat TraesCS2A02G510800 , TraesCS2A02G510800 , TraesCS2A02G510700 , TraesCS2B02G538600 , TraesCS2D02G511800 , TraesCS2D02G512000 , TraesCS2D02G578300 , TraesCS2D02G512100 , TraesCS2A02G510400 , TraesCS2A02G567700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G229500 cytochrome P450, putative, expressed -
2 Sobic.002G017000 OsFBX234 - F-box domain containing protein, expressed -
3 Sobic.002G017000 OsFBX234 - F-box domain containing protein, expressed -
4 Sobic.002G017000 OsFBX234 - F-box domain containing protein, expressed -
5 Sobic.004G227550 - -
6 Sobic.004G227550 - -
7 Sobic.002G007600 3-5 exonuclease domain-containing protein, putative, expressed -
8 Sobic.002G065400 OsSub3 - Putative Subtilisin homologue, expressed -
9 Sobic.005G218100 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed -
10 Sobic.006G085200 CorA-like magnesium transporter protein, putative, expressed -
11 Sobic.003G090500 expressed protein K04506: E3 ubiquitin-protein ligase SIAH1
12 Sobic.004G136800 - -
13 Sobic.005G162300 cytochrome P450 51, putative, expressed K05917: sterol 14alpha-demethylase
14 Sobic.005G161800 - -
15 Sobic.008G053900 citrate-binding protein precursor, putative, expressed -
16 Sobic.001G306600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@red chlorophyll catabolite reductase, putative, expressed K13545: RCCR, red chlorophyll catabolite reductase
17 Sobic.004G157550 - -
18 Sobic.004G157550 - -
19 Sobic.004G157550 - -
20 Sobic.002G023400 expressed protein -


Gene co-expression network
sample Sobic004G012300 Sobic004G012300 Sobic001G229500 Sobic001G229500 Sobic004G012300--Sobic001G229500 Sobic002G017000 Sobic002G017000 Sobic004G012300--Sobic002G017000 Sobic004G227550 Sobic004G227550 Sobic004G012300--Sobic004G227550 Sobic002G007600 Sobic002G007600 Sobic004G012300--Sobic002G007600 Sobic002G065400 Sobic002G065400 Sobic004G012300--Sobic002G065400 Sobic005G218100 Sobic005G218100 Sobic004G012300--Sobic005G218100 Sobic005G141000 Sobic005G141000 Sobic001G229500--Sobic005G141000 Sobic001G229500--Sobic002G065400 Sobic001G275800 Sobic001G275800 Sobic001G229500--Sobic001G275800 Sobic005G020200 Sobic005G020200 Sobic001G229500--Sobic005G020200 Sobic001G229500--Sobic005G218100 Sobic007G090415 Sobic007G090415 Sobic001G229500--Sobic007G090415 Sobic005G203600 Sobic005G203600 Sobic001G229500--Sobic005G203600 Sobic002G124100 Sobic002G124100 Sobic001G229500--Sobic002G124100 Sobic008G130700 Sobic008G130700 Sobic001G229500--Sobic008G130700 Sobic002G017000--Sobic002G017000 Sobic002G017000--Sobic002G007600 Sobic006G085200 Sobic006G085200 Sobic002G017000--Sobic006G085200 Sobic003G090500 Sobic003G090500 Sobic002G017000--Sobic003G090500 Sobic004G136800 Sobic004G136800 Sobic002G017000--Sobic004G136800 Sobic005G162300 Sobic005G162300 Sobic002G017000--Sobic005G162300 Sobic002G216801 Sobic002G216801 Sobic002G017000--Sobic002G216801 Sobic005G161800 Sobic005G161800 Sobic002G017000--Sobic005G161800 Sobic004G227550--Sobic004G227550 Sobic008G053900 Sobic008G053900 Sobic004G227550--Sobic008G053900 Sobic006G225700 Sobic006G225700 Sobic004G227550--Sobic006G225700 Sobic009G107600 Sobic009G107600 Sobic004G227550--Sobic009G107600 Sobic009G152180 Sobic009G152180 Sobic004G227550--Sobic009G152180 Sobic007G201600 Sobic007G201600 Sobic004G227550--Sobic007G201600 Sobic007G094050 Sobic007G094050 Sobic004G227550--Sobic007G094050 Sobic002G084600 Sobic002G084600 Sobic004G227550--Sobic002G084600 Sobic009G058200 Sobic009G058200 Sobic004G227550--Sobic009G058200 Sobic002G007600--Sobic002G017000 Sobic002G007600--Sobic006G085200 Sobic002G007600--Sobic005G161800 Sobic002G007600--Sobic003G090500 Sobic002G007600--Sobic005G218100 Sobic002G007600--Sobic005G162300 Sobic002G007600--Sobic004G136800 Sobic002G065400--Sobic005G141000 Sobic002G065400--Sobic001G229500 Sobic002G065400--Sobic005G020200 Sobic005G218201 Sobic005G218201 Sobic002G065400--Sobic005G218201 Sobic005G218400 Sobic005G218400 Sobic002G065400--Sobic005G218400 Sobic005G190800 Sobic005G190800 Sobic002G065400--Sobic005G190800 Sobic005G200600 Sobic005G200600 Sobic002G065400--Sobic005G200600 Sobic004G249400 Sobic004G249400 Sobic002G065400--Sobic004G249400 Sobic005G218600 Sobic005G218600 Sobic002G065400--Sobic005G218600 Sobic002G023400 Sobic002G023400 Sobic005G218100--Sobic002G023400 Sobic005G218100--Sobic001G275800 Sobic005G218100--Sobic001G229500 Sobic005G218100--Sobic002G007600 Sobic008G167100 Sobic008G167100 Sobic005G218100--Sobic008G167100 Sobic005G218100--Sobic005G162300 Sobic001G166000 Sobic001G166000 Sobic005G218100--Sobic001G166000 Sobic005G142900 Sobic005G142900 Sobic005G218100--Sobic005G142900 Sobic005G218100--Sobic002G017000
Octagon: transcription factors


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