Gene annotation
Transcriptome id Sobic.001G306600.1,Sobic.001G306600.3,Sobic.001G306600.2,Sobic.001G306600.4
Synonym Sb01g029900, ATRCCR, ACD2
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
red chlorophyll catabolite reductase, putative, expressed
UniProt C5WTE5 , A0A1B6PRY6 , A0A1Z5S8N4 , A0A1Z5S8F4
Pfam PF06405
Panther DB PTHR34685 PTHR34685:SF1
NCBI CDD -
KEGG Orthology K13545; RCCR, red chlorophyll catabolite reductase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G37000 : accelerated cell death 2 (ACD2)
RAP-DB (Rice) LOC_Os10g25040.2 : red chlorophyll catabolite reductase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G076800 serine/threonine-protein kinase receptor precursor, putative, expressed -
2 Sobic.005G169400 WIP5 - Wound-induced protein precursor, expressed -
3 Sobic.004G182600 expressed protein -
4 Sobic.001G130000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
5 Sobic.002G035200 transporter family protein, putative, expressed K08150: SLC2A13, MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13
6 Sobic.005G217200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
7 Sobic.008G009200 SAG20, putative, expressed -
8 Sobic.005G209000 GRAS family transcription factor domain containing protein, expressed -
9 Sobic.010G044700 leucine zipper protein-like, putative, expressed -
10 Sobic.004G349400 zinc finger, C3HC4 type domain containing protein, expressed -
11 Sobic.003G111200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PIII1 - Proteinase inhibitor II family protein precursor, expressed -
12 Sobic.010G162900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@reticuline oxidase-like protein precursor, putative, expressed -
13 Sobic.010G203000 - -
14 Sobic.002G023300 SCP-like extracellular protein, expressed K13449: pathogenesis-related protein 1
15 Sobic.002G403500 tetratricopeptide-like helical, putative, expressed -
16 Sobic.007G035000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@decarboxylase, putative, expressed K01592: tyrosine decarboxylase
17 Sobic.006G028100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@electron transfer flavoprotein subunit beta, putative, expressed K03521: fixA, electron transfer flavoprotein beta subunit
18 Sobic.003G097100 receptor kinase ORK10, putative, expressed -
19 Sobic.001G320200 phospholipase D, putative, expressed K01115: phospholipase D1/2
20 Sobic.008G079300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase


Gene co-expression network
sample Sobic001G306600 Sobic001G306600 Sobic006G076800 Sobic006G076800 Sobic001G306600--Sobic006G076800 Sobic005G169400 Sobic005G169400 Sobic001G306600--Sobic005G169400 Sobic004G182600 Sobic004G182600 Sobic001G306600--Sobic004G182600 Sobic001G130000 Sobic001G130000 Sobic001G306600--Sobic001G130000 Sobic002G035200 Sobic002G035200 Sobic001G306600--Sobic002G035200 Sobic005G217200 Sobic005G217200 Sobic001G306600--Sobic005G217200 Sobic008G009200 Sobic008G009200 Sobic001G306600--Sobic008G009200 Sobic005G209000 Sobic005G209000 Sobic001G306600--Sobic005G209000 Sobic010G044700 Sobic010G044700 Sobic001G306600--Sobic010G044700 Sobic001G145700 Sobic001G145700 Sobic006G076800--Sobic001G145700 Sobic002G046800 Sobic002G046800 Sobic006G076800--Sobic002G046800 Sobic005G133200 Sobic005G133200 Sobic006G076800--Sobic005G133200 Sobic002G032700 Sobic002G032700 Sobic006G076800--Sobic002G032700 Sobic007G120401 Sobic007G120401 Sobic006G076800--Sobic007G120401 Sobic002G140700 Sobic002G140700 Sobic006G076800--Sobic002G140700 Sobic003G010300 Sobic003G010300 Sobic006G076800--Sobic003G010300 Sobic006G003400 Sobic006G003400 Sobic006G076800--Sobic006G003400 Sobic008G079300 Sobic008G079300 Sobic006G076800--Sobic008G079300 Sobic003G111200 Sobic003G111200 Sobic005G169400--Sobic003G111200 Sobic009G114000 Sobic009G114000 Sobic005G169400--Sobic009G114000 Sobic004G321800 Sobic004G321800 Sobic005G169400--Sobic004G321800 Sobic006G226400 Sobic006G226400 Sobic005G169400--Sobic006G226400 Sobic003G087200 Sobic003G087200 Sobic005G169400--Sobic003G087200 Sobic004G320600 Sobic004G320600 Sobic005G169400--Sobic004G320600 Sobic005G169400--Sobic008G079300 Sobic003G244600 Sobic003G244600 Sobic005G169400--Sobic003G244600 Sobic001G069900 Sobic001G069900 Sobic005G169400--Sobic001G069900 Sobic006G028100 Sobic006G028100 Sobic004G182600--Sobic006G028100 Sobic004G182600--Sobic001G130000 Sobic003G061800 Sobic003G061800 Sobic004G182600--Sobic003G061800 Sobic007G186000 Sobic007G186000 Sobic004G182600--Sobic007G186000 Sobic003G354400 Sobic003G354400 Sobic004G182600--Sobic003G354400 Sobic009G126900 Sobic009G126900 Sobic004G182600--Sobic009G126900 Sobic004G345800 Sobic004G345800 Sobic004G182600--Sobic004G345800 Sobic009G034700 Sobic009G034700 Sobic004G182600--Sobic009G034700 Sobic004G182600--Sobic005G217200 Sobic001G474500 Sobic001G474500 Sobic001G130000--Sobic001G474500 Sobic001G130000--Sobic009G034700 Sobic007G068100 Sobic007G068100 Sobic001G130000--Sobic007G068100 Sobic003G388251 Sobic003G388251 Sobic001G130000--Sobic003G388251 Sobic001G325200 Sobic001G325200 Sobic001G130000--Sobic001G325200 Sobic001G130000--Sobic001G069900 Sobic001G130000--Sobic008G079300 Sobic008G017800 Sobic008G017800 Sobic001G130000--Sobic008G017800 Sobic001G130000--Sobic004G345800 Sobic002G035200--Sobic005G217200 Sobic003G363100 Sobic003G363100 Sobic002G035200--Sobic003G363100 Sobic001G469500 Sobic001G469500 Sobic002G035200--Sobic001G469500 Sobic002G035200--Sobic006G076800 Sobic005G024200 Sobic005G024200 Sobic002G035200--Sobic005G024200 Sobic002G373100 Sobic002G373100 Sobic002G035200--Sobic002G373100 Sobic007G185200 Sobic007G185200 Sobic002G035200--Sobic007G185200 Sobic007G001100 Sobic007G001100 Sobic002G035200--Sobic007G001100 Sobic002G035200--Sobic008G079300 Sobic008G189200 Sobic008G189200 Sobic005G217200--Sobic008G189200 Sobic010G210200 Sobic010G210200 Sobic005G217200--Sobic010G210200 Sobic005G217200--Sobic003G363100 Sobic005G217200--Sobic009G126900 Sobic004G237600 Sobic004G237600 Sobic005G217200--Sobic004G237600 Sobic003G276000 Sobic003G276000 Sobic005G217200--Sobic003G276000 Sobic005G217200--Sobic003G244600 Sobic010G162900 Sobic010G162900 Sobic005G217200--Sobic010G162900 Sobic002G172900 Sobic002G172900 Sobic005G217200--Sobic002G172900 Sobic008G009100 Sobic008G009100 Sobic008G009200--Sobic008G009100 Sobic008G009200--Sobic001G469500 Sobic008G009200--Sobic010G044700 Sobic005G171500 Sobic005G171500 Sobic008G009200--Sobic005G171500 Sobic001G354400 Sobic001G354400 Sobic008G009200--Sobic001G354400 Sobic008G009200--Sobic005G217200 Sobic008G009200--Sobic003G244600 Sobic008G009200--Sobic002G035200 Sobic002G122800 Sobic002G122800 Sobic008G009200--Sobic002G122800 Sobic009G213200 Sobic009G213200 Sobic005G209000--Sobic009G213200 Sobic006G153900 Sobic006G153900 Sobic005G209000--Sobic006G153900 Sobic001G114400 Sobic001G114400 Sobic005G209000--Sobic001G114400 Sobic009G227900 Sobic009G227900 Sobic005G209000--Sobic009G227900 Sobic009G178300 Sobic009G178300 Sobic005G209000--Sobic009G178300 Sobic002G191100 Sobic002G191100 Sobic005G209000--Sobic002G191100 Sobic010G113000 Sobic010G113000 Sobic005G209000--Sobic010G113000 Sobic007G202800 Sobic007G202800 Sobic005G209000--Sobic007G202800 Sobic010G083900 Sobic010G083900 Sobic005G209000--Sobic010G083900 Sobic010G044700--Sobic001G469500 Sobic009G241300 Sobic009G241300 Sobic010G044700--Sobic009G241300 Sobic007G135000 Sobic007G135000 Sobic010G044700--Sobic007G135000 Sobic010G044700--Sobic008G009200 Sobic009G241400 Sobic009G241400 Sobic010G044700--Sobic009G241400 Sobic003G039700 Sobic003G039700 Sobic010G044700--Sobic003G039700 Sobic010G044700--Sobic003G363100 Sobic010G044700--Sobic007G001100 Sobic009G012900 Sobic009G012900 Sobic010G044700--Sobic009G012900
Octagon: transcription factors


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