Gene annotation
Transcriptome id Sobic.006G028100.1
Synonym ETFBETA, Sb06g002880
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
electron transfer flavoprotein subunit beta, putative, expressed
UniProt C5YCV0
Pfam PF01012
Panther DB PTHR21294 PTHR21294:SF8
NCBI CDD KOG3180; Electron transfer flavoprotein, beta subunit
KEGG Orthology K03521; fixA, electron transfer flavoprotein beta subunit
Gene Ontology GO:0009055; electron transfer activity


Orthologs (automatic annotation)
TAIR AT5G43430 : electron transfer flavoprotein beta
RAP-DB (Rice) LOC_Os04g10400.1 : electron transfer flavoprotein subunit beta, putative, expressed
MaizeGDB (Corn) Zm00025a055617
Brachypodium KQK01483
Barley HORVU6Hr1G093180.3 , HORVU6Hr1G093180.2
Wheat TraesCS6D02G393200 , TraesCS6B02G455600 , TraesCS6A02G409600
Populus -


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cDNA sequences
Sobic.006G028100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G242000 oryzain beta chain precursor, putative, expressed -
2 Sobic.004G182600 expressed protein -
3 Sobic.004G345800 Peroxisomal 3-ketoacyl-CoA thiolase 3 PKT3 (At)(PubMedID : 27208977)@3-ketoacyl-CoA thiolase, peroxisomal precursor, putative, expressed K07513: acetyl-CoA acyltransferase 1
4 Sobic.001G130000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
5 Sobic.003G097100 receptor kinase ORK10, putative, expressed -
6 Sobic.003G061800 glutaryl-CoA dehydrogenase, mitochondrial precursor, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
7 Sobic.001G392400 expressed protein -
8 Sobic.002G315800 Papain family cysteine protease domain containing protein, expressed K01363: cathepsin B
9 Sobic.006G157600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Thireodoxin family protein (Os)(PubMedID : 27208977)@thioredoxin, putative, expressed K03671: thioredoxin 1
10 Sobic.001G320200 phospholipase D, putative, expressed K01115: phospholipase D1/2
11 Sobic.007G092500 expressed protein -
12 Sobic.003G354400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@acyl-coenzyme A oxidase, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
13 Sobic.007G135000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytokinin-O-glucosyltransferase 2, putative, expressed -
14 Sobic.009G034700 aspartic proteinase oryzasin-1 precursor, putative, expressed K08245: phytepsin
15 Sobic.009G226600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@wax synthase, putative, expressed -
16 Sobic.002G130700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@thiol protease SEN102 precursor, putative, expressed -
17 Sobic.001G427200 josephin, putative, expressed K15235: josephin
18 Sobic.001G474500 mitochondrial carrier protein, putative, expressed -
19 Sobic.002G415900 acyl-CoA dehydrogenase family member 10, putative, expressed K00249: ACADM, acyl-CoA dehydrogenase
20 Sobic.001G111150 - K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4


Gene co-expression network
sample Sobic006G028100 Sobic006G028100 Sobic006G242000 Sobic006G242000 Sobic006G028100--Sobic006G242000 Sobic004G182600 Sobic004G182600 Sobic006G028100--Sobic004G182600 Sobic004G345800 Sobic004G345800 Sobic006G028100--Sobic004G345800 Sobic001G130000 Sobic001G130000 Sobic006G028100--Sobic001G130000 Sobic003G097100 Sobic003G097100 Sobic006G028100--Sobic003G097100 Sobic003G061800 Sobic003G061800 Sobic006G028100--Sobic003G061800 Sobic001G392400 Sobic001G392400 Sobic006G028100--Sobic001G392400 Sobic002G315800 Sobic002G315800 Sobic006G028100--Sobic002G315800 Sobic006G157600 Sobic006G157600 Sobic006G028100--Sobic006G157600 Sobic006G242000--Sobic003G097100 Sobic006G242000--Sobic006G028100 Sobic002G217200 Sobic002G217200 Sobic006G242000--Sobic002G217200 Sobic004G174100 Sobic004G174100 Sobic006G242000--Sobic004G174100 Sobic007G135000 Sobic007G135000 Sobic006G242000--Sobic007G135000 Sobic002G130700 Sobic002G130700 Sobic006G242000--Sobic002G130700 Sobic003G022600 Sobic003G022600 Sobic006G242000--Sobic003G022600 Sobic005G064800 Sobic005G064800 Sobic006G242000--Sobic005G064800 Sobic001G320200 Sobic001G320200 Sobic006G242000--Sobic001G320200 Sobic004G182600--Sobic006G028100 Sobic004G182600--Sobic001G130000 Sobic004G182600--Sobic003G061800 Sobic007G186000 Sobic007G186000 Sobic004G182600--Sobic007G186000 Sobic003G354400 Sobic003G354400 Sobic004G182600--Sobic003G354400 Sobic009G126900 Sobic009G126900 Sobic004G182600--Sobic009G126900 Sobic004G182600--Sobic004G345800 Sobic009G034700 Sobic009G034700 Sobic004G182600--Sobic009G034700 Sobic005G217200 Sobic005G217200 Sobic004G182600--Sobic005G217200 Sobic004G345800--Sobic003G061800 Sobic001G474500 Sobic001G474500 Sobic004G345800--Sobic001G474500 Sobic003G184900 Sobic003G184900 Sobic004G345800--Sobic003G184900 Sobic003G388251 Sobic003G388251 Sobic004G345800--Sobic003G388251 Sobic008G079300 Sobic008G079300 Sobic004G345800--Sobic008G079300 Sobic007G068100 Sobic007G068100 Sobic004G345800--Sobic007G068100 Sobic009G057300 Sobic009G057300 Sobic004G345800--Sobic009G057300 Sobic006G127100 Sobic006G127100 Sobic004G345800--Sobic006G127100 Sobic004G321800 Sobic004G321800 Sobic004G345800--Sobic004G321800 Sobic001G130000--Sobic001G474500 Sobic001G130000--Sobic009G034700 Sobic001G130000--Sobic007G068100 Sobic001G130000--Sobic003G388251 Sobic001G325200 Sobic001G325200 Sobic001G130000--Sobic001G325200 Sobic001G069900 Sobic001G069900 Sobic001G130000--Sobic001G069900 Sobic001G130000--Sobic008G079300 Sobic008G017800 Sobic008G017800 Sobic001G130000--Sobic008G017800 Sobic001G130000--Sobic004G345800 Sobic003G097100--Sobic007G135000 Sobic003G097100--Sobic006G242000 Sobic009G241300 Sobic009G241300 Sobic003G097100--Sobic009G241300 Sobic003G097100--Sobic006G028100 Sobic003G097100--Sobic001G320200 Sobic009G241400 Sobic009G241400 Sobic003G097100--Sobic009G241400 Sobic003G097100--Sobic003G022600 Sobic001G469500 Sobic001G469500 Sobic003G097100--Sobic001G469500 Sobic003G097100--Sobic002G130700 Sobic003G061800--Sobic009G057300 Sobic003G061800--Sobic004G345800 Sobic003G061800--Sobic003G354400 Sobic003G061800--Sobic001G474500 Sobic003G061800--Sobic009G126900 Sobic003G061800--Sobic003G388251 Sobic003G061800--Sobic007G068100 Sobic003G329400 Sobic003G329400 Sobic003G061800--Sobic003G329400 Sobic004G101900 Sobic004G101900 Sobic003G061800--Sobic004G101900 Sobic001G392400--Sobic006G028100 Sobic001G392400--Sobic008G079300 Sobic001G392400--Sobic007G135000 Sobic001G392400--Sobic004G345800 Sobic001G392400--Sobic006G242000 Sobic001G392400--Sobic003G022600 Sobic001G392400--Sobic009G034700 Sobic003G069500 Sobic003G069500 Sobic001G392400--Sobic003G069500 Sobic001G392400--Sobic001G130000 Sobic002G315800--Sobic009G034700 Sobic003G241500 Sobic003G241500 Sobic002G315800--Sobic003G241500 Sobic004G131040 Sobic004G131040 Sobic002G315800--Sobic004G131040 Sobic001G111150 Sobic001G111150 Sobic002G315800--Sobic001G111150 Sobic002G315800--Sobic007G068100 Sobic002G415900 Sobic002G415900 Sobic002G315800--Sobic002G415900 Sobic004G124200 Sobic004G124200 Sobic002G315800--Sobic004G124200 Sobic002G315800--Sobic001G474500 Sobic002G315800--Sobic004G345800 Sobic010G205200 Sobic010G205200 Sobic006G157600--Sobic010G205200 Sobic006G028900 Sobic006G028900 Sobic006G157600--Sobic006G028900 Sobic006G157600--Sobic001G130000 Sobic006G157600--Sobic001G474500 Sobic006G157600--Sobic009G034700 Sobic006G157600--Sobic006G028100 Sobic006G157600--Sobic001G069900 Sobic001G274800 Sobic001G274800 Sobic006G157600--Sobic001G274800 Sobic001G301700 Sobic001G301700 Sobic006G157600--Sobic001G301700
Octagon: transcription factors


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