Gene annotation
Transcriptome id Sobic.007G092500.1
Synonym Sb07g008810
Functional annotation expressed protein
UniProt C5YJS3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g24190.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G028100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@electron transfer flavoprotein subunit beta, putative, expressed K03521: fixA, electron transfer flavoprotein beta subunit
2 Sobic.006G242000 oryzain beta chain precursor, putative, expressed -
3 Sobic.002G339500 diacylglycerol kinase, putative, expressed K04718: sphingosine kinase
4 Sobic.005G044800 hydrolase, alpha/beta fold family domain containing protein, expressed -
5 Sobic.002G130700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@thiol protease SEN102 precursor, putative, expressed -
6 Sobic.001G120300 phytanoyl-CoA dioxygenase, putative, expressed K00477: phytanoyl-CoA hydroxylase
7 Sobic.005G064800 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
8 Sobic.003G241500 dehydrogenase, putative, expressed K00031: IDH1, IDH2, isocitrate dehydrogenase
9 Sobic.001G427200 josephin, putative, expressed K15235: josephin
10 Sobic.006G222100 dehydrogenase, putative, expressed -
11 Sobic.004G127700 alpha-1,2-fucosidase, putative, expressed K15923: AXY8, FUC95A, alpha-L-fucosidase 2
12 Sobic.003G354400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@acyl-coenzyme A oxidase, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
13 Sobic.006G157700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@glycosyl hydrolase family 3 protein, putative, expressed -
14 Sobic.009G245700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.001G393800 enoyl-CoA hydratase/isomerase family protein, putative, expressed -
16 Sobic.003G273600 CK1_CaseinKinase_1.3 - CK1 includes the casein kinase 1 kinases, expressed K02218: CSNK1, casein kinase 1
17 Sobic.006G244700 6,7-dimethyl-8-ribityllumazine synthase, chloroplast precursor, putative, expressed K00794: ribH, 6,7-dimethyl-8-ribityllumazine synthase
18 Sobic.010G084000 OsPOP13 - Putative Prolyl Oligopeptidase homologue, expressed -
19 Sobic.003G097100 receptor kinase ORK10, putative, expressed -
20 Sobic.004G182600 expressed protein -


Gene co-expression network
sample Sobic007G092500 Sobic007G092500 Sobic006G028100 Sobic006G028100 Sobic007G092500--Sobic006G028100 Sobic006G242000 Sobic006G242000 Sobic007G092500--Sobic006G242000 Sobic002G339500 Sobic002G339500 Sobic007G092500--Sobic002G339500 Sobic005G044800 Sobic005G044800 Sobic007G092500--Sobic005G044800 Sobic002G130700 Sobic002G130700 Sobic007G092500--Sobic002G130700 Sobic001G120300 Sobic001G120300 Sobic007G092500--Sobic001G120300 Sobic005G064800 Sobic005G064800 Sobic007G092500--Sobic005G064800 Sobic003G241500 Sobic003G241500 Sobic007G092500--Sobic003G241500 Sobic001G427200 Sobic001G427200 Sobic007G092500--Sobic001G427200 Sobic006G028100--Sobic006G242000 Sobic004G182600 Sobic004G182600 Sobic006G028100--Sobic004G182600 Sobic004G345800 Sobic004G345800 Sobic006G028100--Sobic004G345800 Sobic001G130000 Sobic001G130000 Sobic006G028100--Sobic001G130000 Sobic003G097100 Sobic003G097100 Sobic006G028100--Sobic003G097100 Sobic003G061800 Sobic003G061800 Sobic006G028100--Sobic003G061800 Sobic001G392400 Sobic001G392400 Sobic006G028100--Sobic001G392400 Sobic002G315800 Sobic002G315800 Sobic006G028100--Sobic002G315800 Sobic006G157600 Sobic006G157600 Sobic006G028100--Sobic006G157600 Sobic006G242000--Sobic003G097100 Sobic006G242000--Sobic006G028100 Sobic002G217200 Sobic002G217200 Sobic006G242000--Sobic002G217200 Sobic004G174100 Sobic004G174100 Sobic006G242000--Sobic004G174100 Sobic007G135000 Sobic007G135000 Sobic006G242000--Sobic007G135000 Sobic006G242000--Sobic002G130700 Sobic003G022600 Sobic003G022600 Sobic006G242000--Sobic003G022600 Sobic006G242000--Sobic005G064800 Sobic001G320200 Sobic001G320200 Sobic006G242000--Sobic001G320200 Sobic001G427500 Sobic001G427500 Sobic002G339500--Sobic001G427500 Sobic002G339500--Sobic001G120300 Sobic002G092300 Sobic002G092300 Sobic002G339500--Sobic002G092300 Sobic002G193400 Sobic002G193400 Sobic002G339500--Sobic002G193400 Sobic001G057200 Sobic001G057200 Sobic002G339500--Sobic001G057200 Sobic004G202700 Sobic004G202700 Sobic002G339500--Sobic004G202700 Sobic010G123400 Sobic010G123400 Sobic002G339500--Sobic010G123400 Sobic006G244700 Sobic006G244700 Sobic002G339500--Sobic006G244700 Sobic010G084000 Sobic010G084000 Sobic002G339500--Sobic010G084000 Sobic004G358600 Sobic004G358600 Sobic005G044800--Sobic004G358600 Sobic003G012200 Sobic003G012200 Sobic005G044800--Sobic003G012200 Sobic003G372000 Sobic003G372000 Sobic005G044800--Sobic003G372000 Sobic005G044800--Sobic006G244700 Sobic003G344900 Sobic003G344900 Sobic005G044800--Sobic003G344900 Sobic004G127700 Sobic004G127700 Sobic005G044800--Sobic004G127700 Sobic002G116900 Sobic002G116900 Sobic005G044800--Sobic002G116900 Sobic003G273600 Sobic003G273600 Sobic005G044800--Sobic003G273600 Sobic003G055700 Sobic003G055700 Sobic005G044800--Sobic003G055700 Sobic009G034800 Sobic009G034800 Sobic002G130700--Sobic009G034800 Sobic004G275200 Sobic004G275200 Sobic002G130700--Sobic004G275200 Sobic005G129400 Sobic005G129400 Sobic002G130700--Sobic005G129400 Sobic002G130700--Sobic004G174100 Sobic002G130700--Sobic006G242000 Sobic002G027700 Sobic002G027700 Sobic002G130700--Sobic002G027700 Sobic009G245700 Sobic009G245700 Sobic002G130700--Sobic009G245700 Sobic002G130700--Sobic001G427200 Sobic002G241400 Sobic002G241400 Sobic002G130700--Sobic002G241400 Sobic003G354400 Sobic003G354400 Sobic001G120300--Sobic003G354400 Sobic001G394600 Sobic001G394600 Sobic001G120300--Sobic001G394600 Sobic001G120300--Sobic004G127700 Sobic001G120300--Sobic010G084000 Sobic001G123000 Sobic001G123000 Sobic001G120300--Sobic001G123000 Sobic010G205800 Sobic010G205800 Sobic001G120300--Sobic010G205800 Sobic001G000200 Sobic001G000200 Sobic001G120300--Sobic001G000200 Sobic004G183600 Sobic004G183600 Sobic001G120300--Sobic004G183600 Sobic001G120300--Sobic002G092300 Sobic005G064800--Sobic004G202700 Sobic007G073700 Sobic007G073700 Sobic005G064800--Sobic007G073700 Sobic007G029100 Sobic007G029100 Sobic005G064800--Sobic007G029100 Sobic009G190800 Sobic009G190800 Sobic005G064800--Sobic009G190800 Sobic005G064800--Sobic004G174100 Sobic004G142800 Sobic004G142800 Sobic005G064800--Sobic004G142800 Sobic001G416300 Sobic001G416300 Sobic005G064800--Sobic001G416300 Sobic005G064800--Sobic006G242000 Sobic005G064800--Sobic002G339500 Sobic002G087800 Sobic002G087800 Sobic003G241500--Sobic002G087800 Sobic003G241500--Sobic002G315800 Sobic002G415900 Sobic002G415900 Sobic003G241500--Sobic002G415900 Sobic005G024900 Sobic005G024900 Sobic003G241500--Sobic005G024900 Sobic003G241500--Sobic004G345800 Sobic009G057300 Sobic009G057300 Sobic003G241500--Sobic009G057300 Sobic003G241500--Sobic004G127700 Sobic001G474500 Sobic001G474500 Sobic003G241500--Sobic001G474500 Sobic003G428400 Sobic003G428400 Sobic003G241500--Sobic003G428400 Sobic003G436300 Sobic003G436300 Sobic001G427200--Sobic003G436300 Sobic003G217400 Sobic003G217400 Sobic001G427200--Sobic003G217400 Sobic001G427200--Sobic004G174100 Sobic003G077900 Sobic003G077900 Sobic001G427200--Sobic003G077900 Sobic002G251700 Sobic002G251700 Sobic001G427200--Sobic002G251700 Sobic010G090900 Sobic010G090900 Sobic001G427200--Sobic010G090900 Sobic003G116900 Sobic003G116900 Sobic001G427200--Sobic003G116900 Sobic001G427200--Sobic005G044800 Sobic003G299000 Sobic003G299000 Sobic001G427200--Sobic003G299000
Octagon: transcription factors


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