Gene annotation
Transcriptome id Sobic.010G162900.1
Synonym Sb10g021690
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
reticuline oxidase-like protein precursor, putative, expressed
UniProt C5Z483
Pfam PF08031 PF01565
Panther DB PTHR32448
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT5G44390 : FAD-binding Berberine family protein
RAP-DB (Rice) LOC_Os06g35700.1 : reticuline oxidase-like protein precursor, putative, expressed
MaizeGDB (Corn) Zm00025a051097 , Zm00025a051098 , Zm00025a042344 , Zm00025a042340 , Zm00025a042341
Brachypodium KQK18047 , KQJ94235 , KQJ81770 , KQJ98164 , PNT63632 , KQJ83874
Barley HORVU7Hr1G026630.6 , HORVU7Hr1G026630.4 , HORVU7Hr1G026630.5 , HORVU7Hr1G026630.2 , HORVU7Hr1G026630.3 , HORVU7Hr1G026630.1 , HORVU2Hr1G122590.1 , HORVU3Hr1G020240.1 , HORVU2Hr1G013930.1 , HORVU7Hr1G089190.1 , HORVU2Hr1G000530.1 , HORVU2Hr1G021650.1 , HORVU2Hr1G021650.2
Wheat TraesCS4B02G391900 , TraesCS3A02G111600 , TraesCS7A02G354100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G276000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@WRKY26, expressed -
2 Sobic.007G035000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@decarboxylase, putative, expressed K01592: tyrosine decarboxylase
3 Sobic.008G189200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
4 Sobic.008G190900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@thioesterase family protein, putative, expressed -
5 Sobic.005G217200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
6 Sobic.001G454200 - -
7 Sobic.010G018100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@pollen ankyrin, putative, expressed K19044: E3 ubiquitin-protein ligase XBAT32/33
8 Sobic.007G225900 OsWAK13 - OsWAK receptor-like protein kinase, expressed -
9 Sobic.002G274800 "senescence-inducible chloroplast stay-green protein, GenBank annotation:AY850140"(PubMedID : 17513504)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@senescence-inducible chloroplast stay-green protein 1, putative, expressed -
10 Sobic.003G363100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sialyltransferase family domain containing protein, expressed -
11 Sobic.008G090800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Protein copper ion binding protein (Os)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
12 Sobic.003G105800 No apical meristem protein, putative, expressed -
13 Sobic.010G044700 leucine zipper protein-like, putative, expressed -
14 Sobic.003G000600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@WRKY1, expressed -
15 Sobic.003G252300 universal stress protein domain containing protein, putative, expressed -
16 Sobic.005G216000 BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
17 Sobic.005G178100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@F-box/Kelch-repeat protein, putative, expressed -
18 Sobic.009G142200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@No apical meristem protein, putative, expressed -
19 Sobic.009G236300 lectin-like receptor kinase, putative, expressed -
20 Sobic.008G079300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase


Gene co-expression network
sample Sobic010G162900 Sobic010G162900 Sobic003G276000 Sobic003G276000 Sobic010G162900--Sobic003G276000 Sobic007G035000 Sobic007G035000 Sobic010G162900--Sobic007G035000 Sobic008G189200 Sobic008G189200 Sobic010G162900--Sobic008G189200 Sobic008G190900 Sobic008G190900 Sobic010G162900--Sobic008G190900 Sobic005G217200 Sobic005G217200 Sobic010G162900--Sobic005G217200 Sobic001G454200 Sobic001G454200 Sobic010G162900--Sobic001G454200 Sobic010G018100 Sobic010G018100 Sobic010G162900--Sobic010G018100 Sobic007G225900 Sobic007G225900 Sobic010G162900--Sobic007G225900 Sobic002G274800 Sobic002G274800 Sobic010G162900--Sobic002G274800 Sobic003G276000--Sobic010G162900 Sobic008G090800 Sobic008G090800 Sobic003G276000--Sobic008G090800 Sobic003G276000--Sobic001G454200 Sobic003G276000--Sobic005G217200 Sobic003G276000--Sobic008G189200 Sobic003G000600 Sobic003G000600 Sobic003G276000--Sobic003G000600 Sobic003G276000--Sobic010G018100 Sobic003G363100 Sobic003G363100 Sobic003G276000--Sobic003G363100 Sobic001G318900 Sobic001G318900 Sobic003G276000--Sobic001G318900 Sobic002G420700 Sobic002G420700 Sobic007G035000--Sobic002G420700 Sobic005G216000 Sobic005G216000 Sobic007G035000--Sobic005G216000 Sobic005G178100 Sobic005G178100 Sobic007G035000--Sobic005G178100 Sobic003G105800 Sobic003G105800 Sobic007G035000--Sobic003G105800 Sobic003G087200 Sobic003G087200 Sobic007G035000--Sobic003G087200 Sobic004G071200 Sobic004G071200 Sobic007G035000--Sobic004G071200 Sobic003G244600 Sobic003G244600 Sobic007G035000--Sobic003G244600 Sobic009G114000 Sobic009G114000 Sobic007G035000--Sobic009G114000 Sobic009G034700 Sobic009G034700 Sobic007G035000--Sobic009G034700 Sobic008G189200--Sobic003G244600 Sobic008G189200--Sobic008G190900 Sobic008G189200--Sobic005G217200 Sobic010G043400 Sobic010G043400 Sobic008G189200--Sobic010G043400 Sobic009G126900 Sobic009G126900 Sobic008G189200--Sobic009G126900 Sobic008G189200--Sobic002G274800 Sobic007G092700 Sobic007G092700 Sobic008G189200--Sobic007G092700 Sobic008G189200--Sobic003G105800 Sobic001G150200 Sobic001G150200 Sobic008G189200--Sobic001G150200 Sobic008G190900--Sobic008G189200 Sobic008G190900--Sobic003G105800 Sobic003G252300 Sobic003G252300 Sobic008G190900--Sobic003G252300 Sobic008G190900--Sobic002G274800 Sobic006G086100 Sobic006G086100 Sobic008G190900--Sobic006G086100 Sobic004G162400 Sobic004G162400 Sobic008G190900--Sobic004G162400 Sobic002G172900 Sobic002G172900 Sobic008G190900--Sobic002G172900 Sobic008G190900--Sobic009G126900 Sobic008G190900--Sobic007G225900 Sobic005G217200--Sobic008G189200 Sobic010G210200 Sobic010G210200 Sobic005G217200--Sobic010G210200 Sobic005G217200--Sobic003G363100 Sobic005G217200--Sobic009G126900 Sobic004G237600 Sobic004G237600 Sobic005G217200--Sobic004G237600 Sobic005G217200--Sobic003G276000 Sobic005G217200--Sobic003G244600 Sobic005G217200--Sobic010G162900 Sobic005G217200--Sobic002G172900 Sobic001G454200--Sobic003G276000 Sobic001G454200--Sobic008G090800 Sobic001G454200--Sobic003G363100 Sobic001G454200--Sobic010G162900 Sobic001G454200--Sobic010G018100 Sobic001G454200--Sobic005G217200 Sobic001G454200--Sobic001G318900 Sobic004G182300 Sobic004G182300 Sobic001G454200--Sobic004G182300 Sobic001G146200 Sobic001G146200 Sobic001G454200--Sobic001G146200 Sobic010G018100--Sobic010G043400 Sobic001G222200 Sobic001G222200 Sobic010G018100--Sobic001G222200 Sobic010G018100--Sobic002G274800 Sobic004G124200 Sobic004G124200 Sobic010G018100--Sobic004G124200 Sobic001G320200 Sobic001G320200 Sobic010G018100--Sobic001G320200 Sobic010G018100--Sobic003G363100 Sobic010G018100--Sobic008G189200 Sobic003G388251 Sobic003G388251 Sobic010G018100--Sobic003G388251 Sobic002G215800 Sobic002G215800 Sobic010G018100--Sobic002G215800 Sobic007G225900--Sobic003G105800 Sobic003G184900 Sobic003G184900 Sobic007G225900--Sobic003G184900 Sobic008G079300 Sobic008G079300 Sobic007G225900--Sobic008G079300 Sobic007G225900--Sobic005G178100 Sobic009G161000 Sobic009G161000 Sobic007G225900--Sobic009G161000 Sobic007G225900--Sobic002G274800 Sobic004G320600 Sobic004G320600 Sobic007G225900--Sobic004G320600 Sobic007G225900--Sobic009G034700 Sobic007G225900--Sobic003G087200 Sobic002G274800--Sobic010G043400 Sobic002G274800--Sobic007G225900 Sobic002G274800--Sobic003G252300 Sobic002G274800--Sobic003G105800 Sobic002G249200 Sobic002G249200 Sobic002G274800--Sobic002G249200 Sobic002G274800--Sobic008G189200 Sobic002G274800--Sobic009G161000 Sobic002G274800--Sobic004G124200 Sobic001G282600 Sobic001G282600 Sobic002G274800--Sobic001G282600
Octagon: transcription factors


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