Gene annotation
Transcriptome id Sobic.003G000600.1,Sobic.003G000600.2
Synonym WRKY6, ATWRKY6, Sb03g000240
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
WRKY1, expressed
UniProt A0A1W0VV83 , C5XJG7
Pfam PF03106
Panther DB PTHR31429:SF16 PTHR31429 PTHR31429 PTHR31429:SF16
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003700; DNA-binding transcription factor activity GO:0006355regulation of transcription, DNA-templated GO:0006355regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT1G62300 : WRKY family transcription factor
RAP-DB (Rice) LOC_Os01g14440.1 : WRKY1, expressed
MaizeGDB (Corn) Zm00025a036632 , Zm00025a022759
Brachypodium KQK03565
Barley -
Wheat TraesCS1B02G434300 , TraesCS1D02G412500 , TraesCSU02G001200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G144500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ZOS12-09 - C2H2 zinc finger protein, expressed -
2 Sobic.006G086100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@- K03006: RPB1, DNA-directed RNA polymerase II subunit RPB1
3 Sobic.009G142200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@No apical meristem protein, putative, expressed -
4 Sobic.003G146000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@methyltransferase, putative, expressed -
5 Sobic.006G086000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
6 Sobic.007G125900 protein kinase domain containing protein, expressed -
7 Sobic.001G028000 expressed protein -
8 Sobic.004G236550 - -
9 Sobic.002G355200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@BTBN16 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed -
10 Sobic.001G157200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid permease family protein, putative, expressed K03294: basic amino acid/polyamine antiporter, APA family
11 Sobic.003G276000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@WRKY26, expressed -
12 Sobic.003G348700 hydrolase, alpha/beta fold family domain containing protein, expressed -
13 Sobic.003G348400 ankyrin repeat-containing protein, putative, expressed -
14 Sobic.002G012800 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
15 Sobic.010G182966 - K15639: CYP734A1, PHYB activation tagged suppressor 1
16 Sobic.002G379866 - -
17 Sobic.003G424500 Putative uncharacterized protein(PubMedID : 24906815)@expressed protein -
18 Sobic.005G215766 - -
19 Sobic.009G212800 WRKY7, expressed -
20 Sobic.006G218700 tyrosine protein kinase domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G000600 Sobic003G000600 Sobic008G144500 Sobic008G144500 Sobic003G000600--Sobic008G144500 Sobic006G086100 Sobic006G086100 Sobic003G000600--Sobic006G086100 Sobic009G142200 Sobic009G142200 Sobic003G000600--Sobic009G142200 Sobic003G146000 Sobic003G146000 Sobic003G000600--Sobic003G146000 Sobic006G086000 Sobic006G086000 Sobic003G000600--Sobic006G086000 Sobic007G125900 Sobic007G125900 Sobic003G000600--Sobic007G125900 Sobic001G028000 Sobic001G028000 Sobic003G000600--Sobic001G028000 Sobic004G236550 Sobic004G236550 Sobic003G000600--Sobic004G236550 Sobic002G355200 Sobic002G355200 Sobic003G000600--Sobic002G355200 Sobic010G182966 Sobic010G182966 Sobic008G144500--Sobic010G182966 Sobic009G038501 Sobic009G038501 Sobic008G144500--Sobic009G038501 Sobic008G144500--Sobic002G355200 Sobic009G236300 Sobic009G236300 Sobic008G144500--Sobic009G236300 Sobic008G144500--Sobic003G000600 Sobic008G144500--Sobic009G142200 Sobic008G144500--Sobic006G086100 Sobic003G348700 Sobic003G348700 Sobic008G144500--Sobic003G348700 Sobic005G215766 Sobic005G215766 Sobic008G144500--Sobic005G215766 Sobic006G086100--Sobic003G000600 Sobic006G086100--Sobic004G236550 Sobic009G118600 Sobic009G118600 Sobic006G086100--Sobic009G118600 Sobic006G086100--Sobic008G144500 Sobic008G190900 Sobic008G190900 Sobic006G086100--Sobic008G190900 Sobic001G235500 Sobic001G235500 Sobic006G086100--Sobic001G235500 Sobic006G115300 Sobic006G115300 Sobic006G086100--Sobic006G115300 Sobic003G281900 Sobic003G281900 Sobic006G086100--Sobic003G281900 Sobic006G086100--Sobic009G236300 Sobic009G142200--Sobic003G348700 Sobic009G142200--Sobic003G146000 Sobic009G142200--Sobic003G000600 Sobic009G142200--Sobic008G144500 Sobic002G379866 Sobic002G379866 Sobic009G142200--Sobic002G379866 Sobic009G142200--Sobic010G182966 Sobic009G142200--Sobic004G236550 Sobic009G142200--Sobic002G355200 Sobic009G142200--Sobic001G028000 Sobic003G424500 Sobic003G424500 Sobic003G146000--Sobic003G424500 Sobic010G238400 Sobic010G238400 Sobic003G146000--Sobic010G238400 Sobic010G247500 Sobic010G247500 Sobic003G146000--Sobic010G247500 Sobic010G105500 Sobic010G105500 Sobic003G146000--Sobic010G105500 Sobic003G146000--Sobic003G348700 Sobic009G068900 Sobic009G068900 Sobic003G146000--Sobic009G068900 Sobic004G176900 Sobic004G176900 Sobic003G146000--Sobic004G176900 Sobic009G212800 Sobic009G212800 Sobic003G146000--Sobic009G212800 Sobic004G300300 Sobic004G300300 Sobic003G146000--Sobic004G300300 Sobic006G086000--Sobic003G000600 Sobic006G086000--Sobic007G125900 Sobic003G348400 Sobic003G348400 Sobic006G086000--Sobic003G348400 Sobic006G086000--Sobic002G355200 Sobic006G086000--Sobic006G086100 Sobic006G086000--Sobic003G348700 Sobic002G012800 Sobic002G012800 Sobic006G086000--Sobic002G012800 Sobic005G105300 Sobic005G105300 Sobic006G086000--Sobic005G105300 Sobic006G086000--Sobic008G144500 Sobic007G125900--Sobic003G348400 Sobic005G117400 Sobic005G117400 Sobic007G125900--Sobic005G117400 Sobic001G151800 Sobic001G151800 Sobic007G125900--Sobic001G151800 Sobic001G074200 Sobic001G074200 Sobic007G125900--Sobic001G074200 Sobic009G236200 Sobic009G236200 Sobic007G125900--Sobic009G236200 Sobic007G125900--Sobic002G355200 Sobic005G016800 Sobic005G016800 Sobic007G125900--Sobic005G016800 Sobic004G102400 Sobic004G102400 Sobic007G125900--Sobic004G102400 Sobic009G127000 Sobic009G127000 Sobic007G125900--Sobic009G127000 Sobic003G363200 Sobic003G363200 Sobic001G028000--Sobic003G363200 Sobic005G139700 Sobic005G139700 Sobic001G028000--Sobic005G139700 Sobic009G030600 Sobic009G030600 Sobic001G028000--Sobic009G030600 Sobic003G268900 Sobic003G268900 Sobic001G028000--Sobic003G268900 Sobic002G197600 Sobic002G197600 Sobic001G028000--Sobic002G197600 Sobic001G028000--Sobic003G424500 Sobic006G078400 Sobic006G078400 Sobic001G028000--Sobic006G078400 Sobic002G217100 Sobic002G217100 Sobic001G028000--Sobic002G217100 Sobic009G044400 Sobic009G044400 Sobic001G028000--Sobic009G044400 Sobic009G079300 Sobic009G079300 Sobic004G236550--Sobic009G079300 Sobic004G236550--Sobic002G355200 Sobic009G136100 Sobic009G136100 Sobic004G236550--Sobic009G136100 Sobic003G332000 Sobic003G332000 Sobic004G236550--Sobic003G332000 Sobic004G236550--Sobic006G086100 Sobic004G236550--Sobic005G016800 Sobic004G236550--Sobic009G118600 Sobic004G236550--Sobic006G115300 Sobic002G225300 Sobic002G225300 Sobic004G236550--Sobic002G225300 Sobic002G355200--Sobic001G151800 Sobic002G355200--Sobic008G144500 Sobic002G355200--Sobic009G236200 Sobic002G355200--Sobic007G125900 Sobic002G355200--Sobic004G236550 Sobic002G355200--Sobic005G016800 Sobic002G355200--Sobic009G236300 Sobic010G016400 Sobic010G016400 Sobic002G355200--Sobic010G016400 Sobic006G119200 Sobic006G119200 Sobic002G355200--Sobic006G119200
Octagon: transcription factors


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