Gene annotation
Transcriptome id Sobic.002G017000.1
Synonym
Functional annotation OsFBX234 - F-box domain containing protein, expressed
UniProt A0A1W0W1Y3
Pfam PF00646
Panther DB PTHR32133 PTHR32133:SF134
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os08g20492.1 : OsFBX285 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS2A02G265600 , TraesCS2D02G258100 , TraesCS2B02G276400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G017000 OsFBX234 - F-box domain containing protein, expressed -
2 Sobic.002G017000 OsFBX234 - F-box domain containing protein, expressed -
3 Sobic.002G007600 3-5 exonuclease domain-containing protein, putative, expressed -
4 Sobic.006G085200 CorA-like magnesium transporter protein, putative, expressed -
5 Sobic.003G090500 expressed protein K04506: E3 ubiquitin-protein ligase SIAH1
6 Sobic.004G136800 - -
7 Sobic.005G162300 cytochrome P450 51, putative, expressed K05917: sterol 14alpha-demethylase
8 Sobic.002G216801 - -
9 Sobic.005G161800 - -
10 Sobic.002G023400 expressed protein -
11 Sobic.008G167100 cycloartenol synthase, putative, expressed -
12 Sobic.005G218100 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed -
13 Sobic.002G239500 - -
14 Sobic.002G120501 - -
15 Sobic.006G099501 - -
16 Sobic.003G164000 - -
17 Sobic.004G325300 transmembrane amino acid transporter protein, putative, expressed K15015: SLC32A, solute carrier family 32 (vesicular inhibitory amino acid transporter)
18 Sobic.007G090409 - -
19 Sobic.001G252101 - -
20 Sobic.005G000650 - -


Gene co-expression network
sample Sobic002G017000 Sobic002G017000 Sobic002G017000--Sobic002G017000 Sobic002G007600 Sobic002G007600 Sobic002G017000--Sobic002G007600 Sobic006G085200 Sobic006G085200 Sobic002G017000--Sobic006G085200 Sobic003G090500 Sobic003G090500 Sobic002G017000--Sobic003G090500 Sobic004G136800 Sobic004G136800 Sobic002G017000--Sobic004G136800 Sobic005G162300 Sobic005G162300 Sobic002G017000--Sobic005G162300 Sobic002G216801 Sobic002G216801 Sobic002G017000--Sobic002G216801 Sobic005G161800 Sobic005G161800 Sobic002G017000--Sobic005G161800 Sobic002G007600--Sobic002G017000 Sobic002G007600--Sobic006G085200 Sobic002G007600--Sobic005G161800 Sobic002G007600--Sobic003G090500 Sobic005G218100 Sobic005G218100 Sobic002G007600--Sobic005G218100 Sobic002G007600--Sobic005G162300 Sobic002G007600--Sobic004G136800 Sobic006G085200--Sobic002G017000 Sobic006G085200--Sobic002G007600 Sobic006G085200--Sobic003G090500 Sobic006G085200--Sobic004G136800 Sobic006G085200--Sobic005G162300 Sobic006G085200--Sobic002G216801 Sobic006G085200--Sobic005G161800 Sobic003G090500--Sobic002G017000 Sobic003G090500--Sobic002G007600 Sobic008G167100 Sobic008G167100 Sobic003G090500--Sobic008G167100 Sobic003G090500--Sobic005G162300 Sobic002G023400 Sobic002G023400 Sobic003G090500--Sobic002G023400 Sobic002G120501 Sobic002G120501 Sobic003G090500--Sobic002G120501 Sobic003G090500--Sobic006G085200 Sobic004G136800--Sobic002G017000 Sobic004G136800--Sobic002G007600 Sobic004G136800--Sobic006G085200 Sobic004G136800--Sobic003G090500 Sobic001G412600 Sobic001G412600 Sobic004G136800--Sobic001G412600 Sobic006G099501 Sobic006G099501 Sobic004G136800--Sobic006G099501 Sobic004G136800--Sobic005G162300 Sobic005G162300--Sobic008G167100 Sobic005G162300--Sobic002G023400 Sobic005G162300--Sobic002G017000 Sobic005G162300--Sobic002G007600 Sobic005G162300--Sobic003G090500 Sobic005G162300--Sobic002G216801 Sobic005G162300--Sobic005G218100 Sobic002G216801--Sobic008G167100 Sobic002G216801--Sobic002G023400 Sobic002G216801--Sobic002G017000 Sobic002G216801--Sobic005G162300 Sobic002G216801--Sobic002G007600 Sobic002G216801--Sobic005G218100 Sobic002G144025 Sobic002G144025 Sobic002G216801--Sobic002G144025 Sobic005G161800--Sobic002G007600 Sobic005G161800--Sobic002G017000 Sobic005G161800--Sobic002G023400 Sobic005G161800--Sobic005G218100 Sobic005G161800--Sobic003G090500 Sobic005G161800--Sobic005G162300 Sobic005G161800--Sobic006G085200
Octagon: transcription factors


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