Gene annotation
Transcriptome id Sobic.002G239500.1
Synonym
Functional annotation -
UniProt A0A1B6QD62
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.002G239500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G017000 OsFBX234 - F-box domain containing protein, expressed -
2 Sobic.002G017000 OsFBX234 - F-box domain containing protein, expressed -
3 Sobic.002G017000 OsFBX234 - F-box domain containing protein, expressed -
4 Sobic.002G007600 3-5 exonuclease domain-containing protein, putative, expressed -
5 Sobic.005G218100 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed -
6 Sobic.005G162300 cytochrome P450 51, putative, expressed K05917: sterol 14alpha-demethylase
7 Sobic.006G085200 CorA-like magnesium transporter protein, putative, expressed -
8 Sobic.003G090500 expressed protein K04506: E3 ubiquitin-protein ligase SIAH1
9 Sobic.002G023400 expressed protein -
10 Sobic.004G136800 - -
11 Sobic.001G229500 cytochrome P450, putative, expressed -
12 Sobic.002G216801 - -
13 Sobic.005G161800 - -
14 Sobic.001G228300 SAP domain containing protein, expressed -
15 Sobic.008G167100 cycloartenol synthase, putative, expressed -
16 Sobic.001G275800 peptide transporter PTR2, putative, expressed -
17 Sobic.005G142900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.004G291500 LTPL113 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
19 Sobic.003G283100 OsSub3 - Putative Subtilisin homologue, expressed -
20 Sobic.009G056400 fasciclin domain containing protein, expressed -


Gene co-expression network
sample Sobic002G239500 Sobic002G239500 Sobic002G017000 Sobic002G017000 Sobic002G239500--Sobic002G017000 Sobic002G007600 Sobic002G007600 Sobic002G239500--Sobic002G007600 Sobic005G218100 Sobic005G218100 Sobic002G239500--Sobic005G218100 Sobic005G162300 Sobic005G162300 Sobic002G239500--Sobic005G162300 Sobic006G085200 Sobic006G085200 Sobic002G239500--Sobic006G085200 Sobic003G090500 Sobic003G090500 Sobic002G239500--Sobic003G090500 Sobic002G023400 Sobic002G023400 Sobic002G239500--Sobic002G023400 Sobic002G017000--Sobic002G017000 Sobic002G017000--Sobic002G007600 Sobic002G017000--Sobic006G085200 Sobic002G017000--Sobic003G090500 Sobic004G136800 Sobic004G136800 Sobic002G017000--Sobic004G136800 Sobic002G017000--Sobic005G162300 Sobic002G216801 Sobic002G216801 Sobic002G017000--Sobic002G216801 Sobic005G161800 Sobic005G161800 Sobic002G017000--Sobic005G161800 Sobic002G007600--Sobic002G017000 Sobic002G007600--Sobic006G085200 Sobic002G007600--Sobic005G161800 Sobic002G007600--Sobic003G090500 Sobic002G007600--Sobic005G218100 Sobic002G007600--Sobic005G162300 Sobic002G007600--Sobic004G136800 Sobic005G218100--Sobic002G023400 Sobic001G275800 Sobic001G275800 Sobic005G218100--Sobic001G275800 Sobic001G229500 Sobic001G229500 Sobic005G218100--Sobic001G229500 Sobic005G218100--Sobic002G007600 Sobic008G167100 Sobic008G167100 Sobic005G218100--Sobic008G167100 Sobic005G218100--Sobic005G162300 Sobic001G166000 Sobic001G166000 Sobic005G218100--Sobic001G166000 Sobic005G142900 Sobic005G142900 Sobic005G218100--Sobic005G142900 Sobic005G218100--Sobic002G017000 Sobic005G162300--Sobic008G167100 Sobic005G162300--Sobic002G023400 Sobic005G162300--Sobic002G017000 Sobic005G162300--Sobic002G007600 Sobic005G162300--Sobic003G090500 Sobic005G162300--Sobic002G216801 Sobic005G162300--Sobic005G218100 Sobic006G085200--Sobic002G017000 Sobic006G085200--Sobic002G007600 Sobic006G085200--Sobic003G090500 Sobic006G085200--Sobic004G136800 Sobic006G085200--Sobic005G162300 Sobic006G085200--Sobic002G216801 Sobic006G085200--Sobic005G161800 Sobic003G090500--Sobic002G017000 Sobic003G090500--Sobic002G007600 Sobic003G090500--Sobic008G167100 Sobic003G090500--Sobic005G162300 Sobic003G090500--Sobic002G023400 Sobic002G120501 Sobic002G120501 Sobic003G090500--Sobic002G120501 Sobic003G090500--Sobic006G085200 Sobic002G023400--Sobic008G167100 Sobic002G023400--Sobic005G218100 Sobic002G023400--Sobic005G162300 Sobic002G144025 Sobic002G144025 Sobic002G023400--Sobic002G144025 Sobic002G023400--Sobic002G216801 Sobic007G104300 Sobic007G104300 Sobic002G023400--Sobic007G104300 Sobic002G023400--Sobic001G166000 Sobic010G161900 Sobic010G161900 Sobic002G023400--Sobic010G161900 Sobic004G166301 Sobic004G166301 Sobic002G023400--Sobic004G166301
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.