Gene annotation
Transcriptome id Sobic.002G007600.1
Synonym Sb02g000880
Functional annotation 3-5 exonuclease domain-containing protein, putative, expressed
UniProt A0A1W0W1P0
Pfam -
Panther DB PTHR13620 PTHR13620:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G36110 : Polynucleotidyl transferase, ribonuclease H-like superfamily protein
RAP-DB (Rice) LOC_Os07g02170.1 : 3-5 exonuclease domain-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a044875
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G017000 OsFBX234 - F-box domain containing protein, expressed -
2 Sobic.002G017000 OsFBX234 - F-box domain containing protein, expressed -
3 Sobic.002G017000 OsFBX234 - F-box domain containing protein, expressed -
4 Sobic.006G085200 CorA-like magnesium transporter protein, putative, expressed -
5 Sobic.005G161800 - -
6 Sobic.003G090500 expressed protein K04506: E3 ubiquitin-protein ligase SIAH1
7 Sobic.005G218100 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed -
8 Sobic.005G162300 cytochrome P450 51, putative, expressed K05917: sterol 14alpha-demethylase
9 Sobic.004G136800 - -
10 Sobic.002G023400 expressed protein -
11 Sobic.002G216801 - -
12 Sobic.008G167100 cycloartenol synthase, putative, expressed -
13 Sobic.002G239500 - -
14 Sobic.002G120501 - -
15 Sobic.001G229500 cytochrome P450, putative, expressed -
16 Sobic.005G000650 - -
17 Sobic.003G164000 - -
18 Sobic.006G099501 - -
19 Sobic.002G094500 cytochrome P450, putative, expressed -
20 Sobic.003G219000 integral membrane protein TmpA, putative, expressed -


Gene co-expression network
sample Sobic002G007600 Sobic002G007600 Sobic002G017000 Sobic002G017000 Sobic002G007600--Sobic002G017000 Sobic006G085200 Sobic006G085200 Sobic002G007600--Sobic006G085200 Sobic005G161800 Sobic005G161800 Sobic002G007600--Sobic005G161800 Sobic003G090500 Sobic003G090500 Sobic002G007600--Sobic003G090500 Sobic005G218100 Sobic005G218100 Sobic002G007600--Sobic005G218100 Sobic005G162300 Sobic005G162300 Sobic002G007600--Sobic005G162300 Sobic004G136800 Sobic004G136800 Sobic002G007600--Sobic004G136800 Sobic002G017000--Sobic002G017000 Sobic002G017000--Sobic002G007600 Sobic002G017000--Sobic006G085200 Sobic002G017000--Sobic003G090500 Sobic002G017000--Sobic004G136800 Sobic002G017000--Sobic005G162300 Sobic002G216801 Sobic002G216801 Sobic002G017000--Sobic002G216801 Sobic002G017000--Sobic005G161800 Sobic006G085200--Sobic002G017000 Sobic006G085200--Sobic002G007600 Sobic006G085200--Sobic003G090500 Sobic006G085200--Sobic004G136800 Sobic006G085200--Sobic005G162300 Sobic006G085200--Sobic002G216801 Sobic006G085200--Sobic005G161800 Sobic005G161800--Sobic002G007600 Sobic005G161800--Sobic002G017000 Sobic002G023400 Sobic002G023400 Sobic005G161800--Sobic002G023400 Sobic005G161800--Sobic005G218100 Sobic005G161800--Sobic003G090500 Sobic005G161800--Sobic005G162300 Sobic005G161800--Sobic006G085200 Sobic003G090500--Sobic002G017000 Sobic003G090500--Sobic002G007600 Sobic008G167100 Sobic008G167100 Sobic003G090500--Sobic008G167100 Sobic003G090500--Sobic005G162300 Sobic003G090500--Sobic002G023400 Sobic002G120501 Sobic002G120501 Sobic003G090500--Sobic002G120501 Sobic003G090500--Sobic006G085200 Sobic005G218100--Sobic002G023400 Sobic001G275800 Sobic001G275800 Sobic005G218100--Sobic001G275800 Sobic001G229500 Sobic001G229500 Sobic005G218100--Sobic001G229500 Sobic005G218100--Sobic002G007600 Sobic005G218100--Sobic008G167100 Sobic005G218100--Sobic005G162300 Sobic001G166000 Sobic001G166000 Sobic005G218100--Sobic001G166000 Sobic005G142900 Sobic005G142900 Sobic005G218100--Sobic005G142900 Sobic005G218100--Sobic002G017000 Sobic005G162300--Sobic008G167100 Sobic005G162300--Sobic002G023400 Sobic005G162300--Sobic002G017000 Sobic005G162300--Sobic002G007600 Sobic005G162300--Sobic003G090500 Sobic005G162300--Sobic002G216801 Sobic005G162300--Sobic005G218100 Sobic004G136800--Sobic002G017000 Sobic004G136800--Sobic002G007600 Sobic004G136800--Sobic006G085200 Sobic004G136800--Sobic003G090500 Sobic001G412600 Sobic001G412600 Sobic004G136800--Sobic001G412600 Sobic006G099501 Sobic006G099501 Sobic004G136800--Sobic006G099501 Sobic004G136800--Sobic005G162300
Octagon: transcription factors


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