Gene annotation
Transcriptome id Sobic.002G216801.1
Synonym -
Functional annotation -
UniProt A0A1W0W5C6
Pfam PF14543 PF14541
Panther DB PTHR13683 PTHR13683:SF258
NCBI CDD KOG1339; Aspartyl protease
KEGG Orthology -
Gene Ontology GO:0006508; proteolysis GO:0004190aspartic-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT3G54400 : Eukaryotic aspartyl protease family protein
RAP-DB (Rice) LOC_Os07g46480.1 : eukaryotic aspartyl protease domain containing protein, expressed
MaizeGDB (Corn) Zm00025a049030 , Zm00025a039104
Brachypodium KQK11605
Barley HORVU2Hr1G022820.2 , HORVU2Hr1G022820.1 , HORVU3Hr1G109040.1 , HORVU3Hr1G109040.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G167100 cycloartenol synthase, putative, expressed -
2 Sobic.002G023400 expressed protein -
3 Sobic.002G017000 OsFBX234 - F-box domain containing protein, expressed -
4 Sobic.002G017000 OsFBX234 - F-box domain containing protein, expressed -
5 Sobic.002G017000 OsFBX234 - F-box domain containing protein, expressed -
6 Sobic.005G162300 cytochrome P450 51, putative, expressed K05917: sterol 14alpha-demethylase
7 Sobic.002G007600 3-5 exonuclease domain-containing protein, putative, expressed -
8 Sobic.005G218100 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed -
9 Sobic.002G144025 - -
10 Sobic.006G085200 CorA-like magnesium transporter protein, putative, expressed -
11 Sobic.003G090500 expressed protein K04506: E3 ubiquitin-protein ligase SIAH1
12 Sobic.002G047100 - -
13 Sobic.001G166000 B3 DNA binding domain containing protein, expressed -
14 Sobic.004G136800 - -
15 Sobic.005G161800 - -
16 Sobic.010G161900 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.007G104300 Leucine Rich Repeat family protein, expressed -
18 Sobic.003G219000 integral membrane protein TmpA, putative, expressed -
19 Sobic.008G049000 diacylglycerol O-acyltransferase, putative, expressed -
20 Sobic.010G160100 - -


Gene co-expression network
sample Sobic002G216801 Sobic002G216801 Sobic008G167100 Sobic008G167100 Sobic002G216801--Sobic008G167100 Sobic002G023400 Sobic002G023400 Sobic002G216801--Sobic002G023400 Sobic002G017000 Sobic002G017000 Sobic002G216801--Sobic002G017000 Sobic005G162300 Sobic005G162300 Sobic002G216801--Sobic005G162300 Sobic002G007600 Sobic002G007600 Sobic002G216801--Sobic002G007600 Sobic005G218100 Sobic005G218100 Sobic002G216801--Sobic005G218100 Sobic002G144025 Sobic002G144025 Sobic002G216801--Sobic002G144025 Sobic008G167100--Sobic002G023400 Sobic008G167100--Sobic005G162300 Sobic007G104300 Sobic007G104300 Sobic008G167100--Sobic007G104300 Sobic008G167100--Sobic002G144025 Sobic008G049000 Sobic008G049000 Sobic008G167100--Sobic008G049000 Sobic004G166301 Sobic004G166301 Sobic008G167100--Sobic004G166301 Sobic003G090500 Sobic003G090500 Sobic008G167100--Sobic003G090500 Sobic008G167100--Sobic002G216801 Sobic003G219000 Sobic003G219000 Sobic008G167100--Sobic003G219000 Sobic002G023400--Sobic008G167100 Sobic002G023400--Sobic005G218100 Sobic002G023400--Sobic005G162300 Sobic002G023400--Sobic002G144025 Sobic002G023400--Sobic002G216801 Sobic002G023400--Sobic007G104300 Sobic001G166000 Sobic001G166000 Sobic002G023400--Sobic001G166000 Sobic010G161900 Sobic010G161900 Sobic002G023400--Sobic010G161900 Sobic002G023400--Sobic004G166301 Sobic002G017000--Sobic002G017000 Sobic002G017000--Sobic002G007600 Sobic006G085200 Sobic006G085200 Sobic002G017000--Sobic006G085200 Sobic002G017000--Sobic003G090500 Sobic004G136800 Sobic004G136800 Sobic002G017000--Sobic004G136800 Sobic002G017000--Sobic005G162300 Sobic002G017000--Sobic002G216801 Sobic005G161800 Sobic005G161800 Sobic002G017000--Sobic005G161800 Sobic005G162300--Sobic008G167100 Sobic005G162300--Sobic002G023400 Sobic005G162300--Sobic002G017000 Sobic005G162300--Sobic002G007600 Sobic005G162300--Sobic003G090500 Sobic005G162300--Sobic002G216801 Sobic005G162300--Sobic005G218100 Sobic002G007600--Sobic002G017000 Sobic002G007600--Sobic006G085200 Sobic002G007600--Sobic005G161800 Sobic002G007600--Sobic003G090500 Sobic002G007600--Sobic005G218100 Sobic002G007600--Sobic005G162300 Sobic002G007600--Sobic004G136800 Sobic005G218100--Sobic002G023400 Sobic001G275800 Sobic001G275800 Sobic005G218100--Sobic001G275800 Sobic001G229500 Sobic001G229500 Sobic005G218100--Sobic001G229500 Sobic005G218100--Sobic002G007600 Sobic005G218100--Sobic008G167100 Sobic005G218100--Sobic005G162300 Sobic005G218100--Sobic001G166000 Sobic005G142900 Sobic005G142900 Sobic005G218100--Sobic005G142900 Sobic005G218100--Sobic002G017000 Sobic002G144025--Sobic008G167100 Sobic002G144025--Sobic007G104300 Sobic002G144025--Sobic002G023400 Sobic006G268700 Sobic006G268700 Sobic002G144025--Sobic006G268700 Sobic001G181900 Sobic001G181900 Sobic002G144025--Sobic001G181900 Sobic010G160100 Sobic010G160100 Sobic002G144025--Sobic010G160100 Sobic002G144025--Sobic008G049000 Sobic002G144025--Sobic004G166301 Sobic002G047100 Sobic002G047100 Sobic002G144025--Sobic002G047100
Octagon: transcription factors


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