Gene annotation
Transcriptome id Sobic.004G325300.3,Sobic.004G325300.2,Sobic.004G325300.1
Synonym Sb04g035520
Functional annotation transmembrane amino acid transporter protein, putative, expressed
UniProt A0A194YST8 , A0A1Z5RQ10 , C5XUB9
Pfam PF01490 PF03222
Panther DB PTHR22950 PTHR22950:SF269
NCBI CDD KOG1303; Amino acid transporters
KEGG Orthology K15015; SLC32A, solute carrier family 32 (vesicular inhibitory amino acid transporter)
Gene Ontology GO:0003333; amino acid transmembrane transport


Orthologs (automatic annotation)
TAIR AT2G41190 : Transmembrane amino acid transporter family protein
RAP-DB (Rice) LOC_Os02g54730.1 : transmembrane amino acid transporter protein, putative, expressed
MaizeGDB (Corn) Zm00025a022418 , Zm00025a022413 , Zm00025a032974
Brachypodium KQK01076
Barley -
Wheat TraesCS6A02G348300 , TraesCS6B02G381900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G161900 peroxidase precursor, putative, expressed K00430: peroxidase
2 Sobic.005G123900 ATP binding protein, putative, expressed K17592: sacsin
3 Sobic.009G259500 receptor protein kinase CLAVATA1 precursor, putative, expressed -
4 Sobic.006G201600 transcription factor FL, putative, expressed -
5 Sobic.001G258100 OsSub60 - Putative Subtilisin homologue, expressed -
6 Sobic.003G174900 fimbrin-like protein 2, putative, expressed K17336: plastin-3
7 Sobic.003G090500 expressed protein K04506: E3 ubiquitin-protein ligase SIAH1
8 Sobic.001G182000 MBTB51 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
9 Sobic.008G167100 cycloartenol synthase, putative, expressed -
10 Sobic.007G187400 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
11 Sobic.002G023400 expressed protein -
12 Sobic.010G256000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
13 Sobic.004G144100 - -
14 Sobic.009G260200 helix-loop-helix DNA-binding protein, putative, expressed -
15 Sobic.002G047100 - -
16 Sobic.003G178601 - -
17 Sobic.003G375000 RNA recognition motif containing protein, putative, expressed -
18 Sobic.002G217900 OsFBLD9 - F-box, LRR and FBD domain containing protein, expressed -
19 Sobic.010G277200 zinc knuckle domain containing protein, expressed K10904: TIMELESS-interacting protein
20 Sobic.010G193400 GDSL-like lipase/acylhydrolase, putative, expressed -


Gene co-expression network
sample Sobic004G325300 Sobic004G325300 Sobic010G161900 Sobic010G161900 Sobic004G325300--Sobic010G161900 Sobic005G123900 Sobic005G123900 Sobic004G325300--Sobic005G123900 Sobic009G259500 Sobic009G259500 Sobic004G325300--Sobic009G259500 Sobic006G201600 Sobic006G201600 Sobic004G325300--Sobic006G201600 Sobic001G258100 Sobic001G258100 Sobic004G325300--Sobic001G258100 Sobic003G174900 Sobic003G174900 Sobic004G325300--Sobic003G174900 Sobic003G090500 Sobic003G090500 Sobic004G325300--Sobic003G090500 Sobic001G182000 Sobic001G182000 Sobic004G325300--Sobic001G182000 Sobic008G167100 Sobic008G167100 Sobic004G325300--Sobic008G167100 Sobic002G023400 Sobic002G023400 Sobic010G161900--Sobic002G023400 Sobic010G161900--Sobic005G123900 Sobic010G161900--Sobic004G325300 Sobic010G161900--Sobic008G167100 Sobic005G054700 Sobic005G054700 Sobic010G161900--Sobic005G054700 Sobic004G247300 Sobic004G247300 Sobic010G161900--Sobic004G247300 Sobic003G103000 Sobic003G103000 Sobic010G161900--Sobic003G103000 Sobic003G320500 Sobic003G320500 Sobic010G161900--Sobic003G320500 Sobic007G187400 Sobic007G187400 Sobic010G161900--Sobic007G187400 Sobic009G260200 Sobic009G260200 Sobic005G123900--Sobic009G260200 Sobic005G148400 Sobic005G148400 Sobic005G123900--Sobic005G148400 Sobic005G123900--Sobic010G161900 Sobic005G123900--Sobic006G201600 Sobic008G066900 Sobic008G066900 Sobic005G123900--Sobic008G066900 Sobic005G123900--Sobic007G187400 Sobic005G204100 Sobic005G204100 Sobic005G123900--Sobic005G204100 Sobic003G156766 Sobic003G156766 Sobic005G123900--Sobic003G156766 Sobic006G099501 Sobic006G099501 Sobic005G123900--Sobic006G099501 Sobic009G259500--Sobic005G204100 Sobic002G216600 Sobic002G216600 Sobic009G259500--Sobic002G216600 Sobic004G154600 Sobic004G154600 Sobic009G259500--Sobic004G154600 Sobic002G072700 Sobic002G072700 Sobic009G259500--Sobic002G072700 Sobic004G199700 Sobic004G199700 Sobic009G259500--Sobic004G199700 Sobic007G142900 Sobic007G142900 Sobic009G259500--Sobic007G142900 Sobic009G259500--Sobic001G258100 Sobic009G259500--Sobic003G174900 Sobic003G300200 Sobic003G300200 Sobic009G259500--Sobic003G300200 Sobic006G201600--Sobic009G260200 Sobic006G201600--Sobic007G142900 Sobic004G144100 Sobic004G144100 Sobic006G201600--Sobic004G144100 Sobic001G042600 Sobic001G042600 Sobic006G201600--Sobic001G042600 Sobic009G200000 Sobic009G200000 Sobic006G201600--Sobic009G200000 Sobic006G201600--Sobic009G259500 Sobic006G201600--Sobic005G123900 Sobic007G189400 Sobic007G189400 Sobic006G201600--Sobic007G189400 Sobic006G201600--Sobic005G204100 Sobic004G259101 Sobic004G259101 Sobic001G258100--Sobic004G259101 Sobic001G258100--Sobic009G259500 Sobic001G258100--Sobic003G174900 Sobic001G258100--Sobic002G072700 Sobic010G010900 Sobic010G010900 Sobic001G258100--Sobic010G010900 Sobic004G168600 Sobic004G168600 Sobic001G258100--Sobic004G168600 Sobic001G258100--Sobic007G142900 Sobic001G267800 Sobic001G267800 Sobic001G258100--Sobic001G267800 Sobic001G514400 Sobic001G514400 Sobic001G258100--Sobic001G514400 Sobic003G174900--Sobic004G199700 Sobic003G174900--Sobic002G216600 Sobic003G174900--Sobic009G259500 Sobic001G361800 Sobic001G361800 Sobic003G174900--Sobic001G361800 Sobic003G174900--Sobic001G258100 Sobic003G174900--Sobic005G204100 Sobic002G348700 Sobic002G348700 Sobic003G174900--Sobic002G348700 Sobic008G086200 Sobic008G086200 Sobic003G174900--Sobic008G086200 Sobic004G205500 Sobic004G205500 Sobic003G174900--Sobic004G205500 Sobic002G017000 Sobic002G017000 Sobic003G090500--Sobic002G017000 Sobic002G007600 Sobic002G007600 Sobic003G090500--Sobic002G007600 Sobic003G090500--Sobic008G167100 Sobic005G162300 Sobic005G162300 Sobic003G090500--Sobic005G162300 Sobic003G090500--Sobic002G023400 Sobic002G120501 Sobic002G120501 Sobic003G090500--Sobic002G120501 Sobic006G085200 Sobic006G085200 Sobic003G090500--Sobic006G085200 Sobic008G030400 Sobic008G030400 Sobic001G182000--Sobic008G030400 Sobic009G253200 Sobic009G253200 Sobic001G182000--Sobic009G253200 Sobic005G011000 Sobic005G011000 Sobic001G182000--Sobic005G011000 Sobic001G182000--Sobic005G148400 Sobic001G182000--Sobic004G325300 Sobic001G182000--Sobic005G123900 Sobic002G355600 Sobic002G355600 Sobic001G182000--Sobic002G355600 Sobic010G252000 Sobic010G252000 Sobic001G182000--Sobic010G252000 Sobic004G166301 Sobic004G166301 Sobic001G182000--Sobic004G166301 Sobic008G167100--Sobic002G023400 Sobic008G167100--Sobic005G162300 Sobic007G104300 Sobic007G104300 Sobic008G167100--Sobic007G104300 Sobic002G144025 Sobic002G144025 Sobic008G167100--Sobic002G144025 Sobic008G049000 Sobic008G049000 Sobic008G167100--Sobic008G049000 Sobic008G167100--Sobic004G166301 Sobic008G167100--Sobic003G090500 Sobic002G216801 Sobic002G216801 Sobic008G167100--Sobic002G216801 Sobic003G219000 Sobic003G219000 Sobic008G167100--Sobic003G219000
Octagon: transcription factors


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