Gene annotation
Transcriptome id Sobic.002G217900.1
Synonym Sb02g025966
Functional annotation OsFBLD9 - F-box, LRR and FBD domain containing protein, expressed
UniProt A0A1B6QCS7
Pfam PF00646
Panther DB PTHR32212 PTHR32212:SF94
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G13570 : F-box/RNI-like superfamily protein
RAP-DB (Rice) LOC_Os09g27090.1 : OsFBLD9 - F-box, LRR and FBD domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU5Hr1G061480.2 , HORVU5Hr1G061480.3 , HORVU5Hr1G061480.1
Wheat TraesCS5A02G208500 , TraesCS5A02G208500 , TraesCS5B02G207000 , TraesCS5D02G214500 , TraesCS5B02G206600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G134900 ribonucleoside-diphosphate reductase small chain, putative, expressed K10808: ribonucleoside-diphosphate reductase subunit M2
2 Sobic.003G444300 expressed protein K11550: SPBC25, kinetochore protein Spc25, animal type
3 Sobic.001G169800 cyclin, putative, expressed K06627: cyclin-A
4 Sobic.001G083300 transducin family protein, putative, expressed K02180: cell cycle arrest protein BUB3
5 Sobic.001G142000 deoxyuridine 5-triphosphate nucleotidohydrolase, putative, expressed K01520: dut, dUTP pyrophosphatase
6 Sobic.003G318900 DNA repair metallo-beta-lactamase, putative, expressed K15341: DCLRE1B, DNA cross-link repair 1B protein
7 Sobic.006G218600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBK15 - F-box domain and kelch repeat containing protein, expressed -
8 Sobic.002G267600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
9 Sobic.001G105800 OsFBX109 - F-box domain containing protein, expressed -
10 Sobic.001G456500 RPA1B - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1
11 Sobic.006G189200 ubiquitin-conjugating enzyme, putative, expressed K10577: UBE2I, ubiquitin-conjugating enzyme E2 I
12 Sobic.003G201000 WD domain, G-beta repeat domain containing protein, expressed -
13 Sobic.010G204700 LTPL129 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
14 Sobic.008G075100 hhH-GPD superfamily base excision DNA repair protein, putative, expressed K03575: A/G-specific adenine glycosylase
15 Sobic.006G081800 histone H3, putative, expressed K11253: histone H3
16 Sobic.010G230000 monocopper oxidase, putative, expressed -
17 Sobic.002G303800 expressed protein -
18 Sobic.005G098600 - -
19 Sobic.004G327600 expressed protein -
20 Sobic.004G325300 transmembrane amino acid transporter protein, putative, expressed K15015: SLC32A, solute carrier family 32 (vesicular inhibitory amino acid transporter)


Gene co-expression network
sample Sobic002G217900 Sobic002G217900 Sobic006G134900 Sobic006G134900 Sobic002G217900--Sobic006G134900 Sobic003G444300 Sobic003G444300 Sobic002G217900--Sobic003G444300 Sobic001G169800 Sobic001G169800 Sobic002G217900--Sobic001G169800 Sobic001G083300 Sobic001G083300 Sobic002G217900--Sobic001G083300 Sobic001G142000 Sobic001G142000 Sobic002G217900--Sobic001G142000 Sobic003G318900 Sobic003G318900 Sobic002G217900--Sobic003G318900 Sobic006G218600 Sobic006G218600 Sobic002G217900--Sobic006G218600 Sobic002G267600 Sobic002G267600 Sobic002G217900--Sobic002G267600 Sobic001G105800 Sobic001G105800 Sobic002G217900--Sobic001G105800 Sobic006G081800 Sobic006G081800 Sobic006G134900--Sobic006G081800 Sobic006G134900--Sobic001G169800 Sobic007G176800 Sobic007G176800 Sobic006G134900--Sobic007G176800 Sobic004G170500 Sobic004G170500 Sobic006G134900--Sobic004G170500 Sobic006G189200 Sobic006G189200 Sobic006G134900--Sobic006G189200 Sobic006G116500 Sobic006G116500 Sobic006G134900--Sobic006G116500 Sobic006G134900--Sobic001G142000 Sobic001G078600 Sobic001G078600 Sobic006G134900--Sobic001G078600 Sobic006G134900--Sobic001G105800 Sobic001G456500 Sobic001G456500 Sobic003G444300--Sobic001G456500 Sobic003G444300--Sobic001G083300 Sobic003G444300--Sobic001G169800 Sobic003G444300--Sobic001G105800 Sobic003G444300--Sobic001G142000 Sobic004G331600 Sobic004G331600 Sobic003G444300--Sobic004G331600 Sobic003G201000 Sobic003G201000 Sobic003G444300--Sobic003G201000 Sobic002G303800 Sobic002G303800 Sobic003G444300--Sobic002G303800 Sobic010G105400 Sobic010G105400 Sobic003G444300--Sobic010G105400 Sobic001G169800--Sobic001G456500 Sobic001G169800--Sobic006G116500 Sobic001G169800--Sobic003G444300 Sobic001G169800--Sobic001G083300 Sobic002G223900 Sobic002G223900 Sobic001G169800--Sobic002G223900 Sobic003G183700 Sobic003G183700 Sobic001G169800--Sobic003G183700 Sobic001G169800--Sobic001G105800 Sobic004G355500 Sobic004G355500 Sobic001G169800--Sobic004G355500 Sobic003G179500 Sobic003G179500 Sobic001G169800--Sobic003G179500 Sobic001G083300--Sobic001G456500 Sobic001G083300--Sobic002G223900 Sobic001G083300--Sobic003G444300 Sobic010G147700 Sobic010G147700 Sobic001G083300--Sobic010G147700 Sobic009G087000 Sobic009G087000 Sobic001G083300--Sobic009G087000 Sobic001G083300--Sobic003G183700 Sobic008G129200 Sobic008G129200 Sobic001G083300--Sobic008G129200 Sobic001G083300--Sobic001G105800 Sobic001G083300--Sobic004G331600 Sobic001G142000--Sobic001G456500 Sobic010G054600 Sobic010G054600 Sobic001G142000--Sobic010G054600 Sobic001G142000--Sobic004G331600 Sobic001G142000--Sobic003G444300 Sobic001G142000--Sobic008G129200 Sobic001G142000--Sobic001G083300 Sobic001G142000--Sobic006G116500 Sobic001G013400 Sobic001G013400 Sobic001G142000--Sobic001G013400 Sobic004G075900 Sobic004G075900 Sobic001G142000--Sobic004G075900 Sobic009G172950 Sobic009G172950 Sobic003G318900--Sobic009G172950 Sobic003G032200 Sobic003G032200 Sobic003G318900--Sobic003G032200 Sobic003G292700 Sobic003G292700 Sobic003G318900--Sobic003G292700 Sobic002G021200 Sobic002G021200 Sobic003G318900--Sobic002G021200 Sobic003G318900--Sobic003G201000 Sobic003G318900--Sobic001G083300 Sobic003G318900--Sobic003G444300 Sobic001G377700 Sobic001G377700 Sobic003G318900--Sobic001G377700 Sobic002G215200 Sobic002G215200 Sobic003G318900--Sobic002G215200 Sobic001G069700 Sobic001G069700 Sobic006G218600--Sobic001G069700 Sobic003G442300 Sobic003G442300 Sobic006G218600--Sobic003G442300 Sobic003G277300 Sobic003G277300 Sobic006G218600--Sobic003G277300 Sobic006G218600--Sobic001G013400 Sobic006G218600--Sobic001G456500 Sobic006G218600--Sobic006G134900 Sobic005G098600 Sobic005G098600 Sobic006G218600--Sobic005G098600 Sobic006G218600--Sobic001G105800 Sobic006G218600--Sobic001G142000 Sobic008G163400 Sobic008G163400 Sobic002G267600--Sobic008G163400 Sobic003G239000 Sobic003G239000 Sobic002G267600--Sobic003G239000 Sobic001G149100 Sobic001G149100 Sobic002G267600--Sobic001G149100 Sobic007G031300 Sobic007G031300 Sobic002G267600--Sobic007G031300 Sobic003G299200 Sobic003G299200 Sobic002G267600--Sobic003G299200 Sobic008G179000 Sobic008G179000 Sobic002G267600--Sobic008G179000 Sobic004G208100 Sobic004G208100 Sobic002G267600--Sobic004G208100 Sobic001G408300 Sobic001G408300 Sobic002G267600--Sobic001G408300 Sobic004G047500 Sobic004G047500 Sobic002G267600--Sobic004G047500 Sobic007G007800 Sobic007G007800 Sobic001G105800--Sobic007G007800 Sobic001G105800--Sobic002G223900 Sobic009G184200 Sobic009G184200 Sobic001G105800--Sobic009G184200 Sobic001G105800--Sobic003G444300 Sobic003G387700 Sobic003G387700 Sobic001G105800--Sobic003G387700 Sobic001G105800--Sobic001G083300 Sobic001G105800--Sobic001G456500 Sobic001G105800--Sobic010G105400 Sobic001G105800--Sobic009G172950
Octagon: transcription factors


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