Gene annotation
Transcriptome id Sobic.006G134900.1,Sobic.006G134900.2
Synonym TSO2, ATTSO2, Sb06g021460
Functional annotation ribonucleoside-diphosphate reductase small chain, putative, expressed
UniProt A0A1B6PLV7 , A0A1Z5RDN9
Pfam PF00268
Panther DB PTHR23409
NCBI CDD -
KEGG Orthology K10808; ribonucleoside-diphosphate reductase subunit M2
Gene Ontology GO:0009186; deoxyribonucleoside diphosphate metabolic process


Orthologs (automatic annotation)
TAIR AT3G27060 : Ferritin/ribonucleotide reductase-like family protein
RAP-DB (Rice) LOC_Os06g14620.1 : ribonucleoside-diphosphate reductase small chain, putative, expressed
MaizeGDB (Corn) Zm00025a010810 , Zm00025a042711 , Zm00025a050377
Brachypodium KQK18690 , KQK20574
Barley HORVU7Hr1G041710.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G081800 histone H3, putative, expressed K11253: histone H3
2 Sobic.001G169800 cyclin, putative, expressed K06627: cyclin-A
3 Sobic.007G176800 acyl carrier protein, putative, expressed -
4 Sobic.004G170500 histone H3, putative, expressed K11253: histone H3
5 Sobic.006G189200 ubiquitin-conjugating enzyme, putative, expressed K10577: UBE2I, ubiquitin-conjugating enzyme E2 I
6 Sobic.006G116500 expressed protein -
7 Sobic.001G142000 deoxyuridine 5-triphosphate nucleotidohydrolase, putative, expressed K01520: dut, dUTP pyrophosphatase
8 Sobic.001G078600 CAMK_CAMK_like_Aur_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other
9 Sobic.001G105800 OsFBX109 - F-box domain containing protein, expressed -
10 Sobic.007G154500 F-box protein, putative, expressed -
11 Sobic.001G456500 RPA1B - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1
12 Sobic.002G246900 expressed protein -
13 Sobic.004G229200 phosphate-induced protein 1 conserved region domain containing protein, expressed -
14 Sobic.006G218600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBK15 - F-box domain and kelch repeat containing protein, expressed -
15 Sobic.001G083300 transducin family protein, putative, expressed K02180: cell cycle arrest protein BUB3
16 Sobic.003G442300 NAD dependent epimerase/dehydratase family protein, putative, expressed K12449: UDP-apiose/xylose synthase
17 Sobic.004G357500 expressed protein -
18 Sobic.004G355500 RPA2A - Putative single-stranded DNA binding complex subunit 2, expressed K10739: RFA2, replication factor A2
19 Sobic.002G162300 expressed protein K11270: chromosome transmission fidelity protein 8
20 Sobic.003G444300 expressed protein K11550: SPBC25, kinetochore protein Spc25, animal type


Gene co-expression network
sample Sobic006G134900 Sobic006G134900 Sobic006G081800 Sobic006G081800 Sobic006G134900--Sobic006G081800 Sobic001G169800 Sobic001G169800 Sobic006G134900--Sobic001G169800 Sobic007G176800 Sobic007G176800 Sobic006G134900--Sobic007G176800 Sobic004G170500 Sobic004G170500 Sobic006G134900--Sobic004G170500 Sobic006G189200 Sobic006G189200 Sobic006G134900--Sobic006G189200 Sobic006G116500 Sobic006G116500 Sobic006G134900--Sobic006G116500 Sobic001G142000 Sobic001G142000 Sobic006G134900--Sobic001G142000 Sobic001G078600 Sobic001G078600 Sobic006G134900--Sobic001G078600 Sobic001G105800 Sobic001G105800 Sobic006G134900--Sobic001G105800 Sobic006G081800--Sobic006G134900 Sobic004G229200 Sobic004G229200 Sobic006G081800--Sobic004G229200 Sobic006G081800--Sobic001G169800 Sobic006G081800--Sobic001G105800 Sobic007G017700 Sobic007G017700 Sobic006G081800--Sobic007G017700 Sobic002G289800 Sobic002G289800 Sobic006G081800--Sobic002G289800 Sobic001G238900 Sobic001G238900 Sobic006G081800--Sobic001G238900 Sobic002G246900 Sobic002G246900 Sobic006G081800--Sobic002G246900 Sobic004G279601 Sobic004G279601 Sobic006G081800--Sobic004G279601 Sobic001G456500 Sobic001G456500 Sobic001G169800--Sobic001G456500 Sobic001G169800--Sobic006G116500 Sobic003G444300 Sobic003G444300 Sobic001G169800--Sobic003G444300 Sobic001G083300 Sobic001G083300 Sobic001G169800--Sobic001G083300 Sobic002G223900 Sobic002G223900 Sobic001G169800--Sobic002G223900 Sobic003G183700 Sobic003G183700 Sobic001G169800--Sobic003G183700 Sobic001G169800--Sobic001G105800 Sobic004G355500 Sobic004G355500 Sobic001G169800--Sobic004G355500 Sobic003G179500 Sobic003G179500 Sobic001G169800--Sobic003G179500 Sobic007G176800--Sobic006G134900 Sobic003G442300 Sobic003G442300 Sobic007G176800--Sobic003G442300 Sobic001G261549 Sobic001G261549 Sobic007G176800--Sobic001G261549 Sobic009G189200 Sobic009G189200 Sobic007G176800--Sobic009G189200 Sobic007G214700 Sobic007G214700 Sobic007G176800--Sobic007G214700 Sobic010G230000 Sobic010G230000 Sobic007G176800--Sobic010G230000 Sobic007G176800--Sobic004G355500 Sobic005G047000 Sobic005G047000 Sobic007G176800--Sobic005G047000 Sobic007G176800--Sobic001G169800 Sobic006G076400 Sobic006G076400 Sobic004G170500--Sobic006G076400 Sobic003G057100 Sobic003G057100 Sobic004G170500--Sobic003G057100 Sobic004G170500--Sobic006G134900 Sobic004G170500--Sobic001G078600 Sobic004G170500--Sobic004G279601 Sobic003G347900 Sobic003G347900 Sobic004G170500--Sobic003G347900 Sobic004G170500--Sobic006G081800 Sobic002G136600 Sobic002G136600 Sobic004G170500--Sobic002G136600 Sobic001G205000 Sobic001G205000 Sobic004G170500--Sobic001G205000 Sobic001G404700 Sobic001G404700 Sobic006G189200--Sobic001G404700 Sobic006G189200--Sobic006G134900 Sobic004G208100 Sobic004G208100 Sobic006G189200--Sobic004G208100 Sobic006G189200--Sobic001G169800 Sobic006G189200--Sobic004G229200 Sobic006G189200--Sobic006G081800 Sobic001G108400 Sobic001G108400 Sobic006G189200--Sobic001G108400 Sobic002G151400 Sobic002G151400 Sobic006G189200--Sobic002G151400 Sobic001G026600 Sobic001G026600 Sobic006G189200--Sobic001G026600 Sobic006G116500--Sobic001G456500 Sobic006G116500--Sobic004G355500 Sobic006G116500--Sobic001G169800 Sobic001G070300 Sobic001G070300 Sobic006G116500--Sobic001G070300 Sobic006G116500--Sobic003G179500 Sobic008G129200 Sobic008G129200 Sobic006G116500--Sobic008G129200 Sobic006G116500--Sobic002G223900 Sobic004G331600 Sobic004G331600 Sobic006G116500--Sobic004G331600 Sobic004G047100 Sobic004G047100 Sobic006G116500--Sobic004G047100 Sobic001G142000--Sobic001G456500 Sobic010G054600 Sobic010G054600 Sobic001G142000--Sobic010G054600 Sobic001G142000--Sobic004G331600 Sobic001G142000--Sobic003G444300 Sobic001G142000--Sobic008G129200 Sobic001G142000--Sobic001G083300 Sobic001G142000--Sobic006G116500 Sobic001G013400 Sobic001G013400 Sobic001G142000--Sobic001G013400 Sobic004G075900 Sobic004G075900 Sobic001G142000--Sobic004G075900 Sobic006G102900 Sobic006G102900 Sobic001G078600--Sobic006G102900 Sobic002G426800 Sobic002G426800 Sobic001G078600--Sobic002G426800 Sobic010G274000 Sobic010G274000 Sobic001G078600--Sobic010G274000 Sobic005G144600 Sobic005G144600 Sobic001G078600--Sobic005G144600 Sobic004G197400 Sobic004G197400 Sobic001G078600--Sobic004G197400 Sobic004G285900 Sobic004G285900 Sobic001G078600--Sobic004G285900 Sobic001G078600--Sobic006G116500 Sobic001G528600 Sobic001G528600 Sobic001G078600--Sobic001G528600 Sobic007G154500 Sobic007G154500 Sobic001G078600--Sobic007G154500 Sobic007G007800 Sobic007G007800 Sobic001G105800--Sobic007G007800 Sobic001G105800--Sobic002G223900 Sobic009G184200 Sobic009G184200 Sobic001G105800--Sobic009G184200 Sobic001G105800--Sobic003G444300 Sobic003G387700 Sobic003G387700 Sobic001G105800--Sobic003G387700 Sobic001G105800--Sobic001G083300 Sobic001G105800--Sobic001G456500 Sobic010G105400 Sobic010G105400 Sobic001G105800--Sobic010G105400 Sobic009G172950 Sobic009G172950 Sobic001G105800--Sobic009G172950
Octagon: transcription factors


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