Gene annotation
Transcriptome id Sobic.005G098600.1
Synonym
Functional annotation -
UniProt A0A1B6PRC6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.005G098600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G142000 deoxyuridine 5-triphosphate nucleotidohydrolase, putative, expressed K01520: dut, dUTP pyrophosphatase
2 Sobic.001G456500 RPA1B - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1
3 Sobic.006G218600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBK15 - F-box domain and kelch repeat containing protein, expressed -
4 Sobic.003G444300 expressed protein K11550: SPBC25, kinetochore protein Spc25, animal type
5 Sobic.004G327600 expressed protein -
6 Sobic.010G003100 monocopper oxidase, putative, expressed -
7 Sobic.004G257600 zinc finger family protein, putative, expressed K18932: palmitoyltransferase
8 Sobic.001G105800 OsFBX109 - F-box domain containing protein, expressed -
9 Sobic.004G075900 CSLA1 - cellulose synthase-like family A@ mannan synthase, expressed K13680: beta-mannan synthase
10 Sobic.004G197400 expressed protein K00558: DNMT1, DNA (cytosine-5)-methyltransferase 1
11 Sobic.001G083300 transducin family protein, putative, expressed K02180: cell cycle arrest protein BUB3
12 Sobic.004G331600 MCM5 - Putative minichromosome maintenance MCM complex subunit 5, expressed K02209: MCM5, DNA replication licensing factor MCM5
13 Sobic.004G308100 uncharacterized Cys-rich domain containing protein, putative, expressed -
14 Sobic.005G020100 CDC45B - Putative DNA replication initiation protein, expressed K06628: cell division control protein 45
15 Sobic.007G000500 HMG1/2, putative, expressed -
16 Sobic.007G214700 fasciclin domain containing protein, expressed -
17 Sobic.009G088700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cellulase, putative, expressed -
18 Sobic.001G146900 expressed protein -
19 Sobic.010G054600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ribonucleoside-diphosphate reductase large subunit, putative, expressed K10807: ribonucleoside-diphosphate reductase subunit M1
20 Sobic.003G142100 beta-D-xylosidase, putative, expressed -


Gene co-expression network
sample Sobic005G098600 Sobic005G098600 Sobic001G142000 Sobic001G142000 Sobic005G098600--Sobic001G142000 Sobic001G456500 Sobic001G456500 Sobic005G098600--Sobic001G456500 Sobic006G218600 Sobic006G218600 Sobic005G098600--Sobic006G218600 Sobic003G444300 Sobic003G444300 Sobic005G098600--Sobic003G444300 Sobic004G327600 Sobic004G327600 Sobic005G098600--Sobic004G327600 Sobic010G003100 Sobic010G003100 Sobic005G098600--Sobic010G003100 Sobic004G257600 Sobic004G257600 Sobic005G098600--Sobic004G257600 Sobic001G105800 Sobic001G105800 Sobic005G098600--Sobic001G105800 Sobic004G075900 Sobic004G075900 Sobic005G098600--Sobic004G075900 Sobic001G142000--Sobic001G456500 Sobic010G054600 Sobic010G054600 Sobic001G142000--Sobic010G054600 Sobic004G331600 Sobic004G331600 Sobic001G142000--Sobic004G331600 Sobic001G142000--Sobic003G444300 Sobic008G129200 Sobic008G129200 Sobic001G142000--Sobic008G129200 Sobic001G083300 Sobic001G083300 Sobic001G142000--Sobic001G083300 Sobic006G116500 Sobic006G116500 Sobic001G142000--Sobic006G116500 Sobic001G013400 Sobic001G013400 Sobic001G142000--Sobic001G013400 Sobic001G142000--Sobic004G075900 Sobic001G456500--Sobic006G116500 Sobic001G456500--Sobic004G331600 Sobic001G456500--Sobic001G142000 Sobic001G456500--Sobic001G083300 Sobic001G456500--Sobic008G129200 Sobic002G223900 Sobic002G223900 Sobic001G456500--Sobic002G223900 Sobic001G169800 Sobic001G169800 Sobic001G456500--Sobic001G169800 Sobic001G456500--Sobic003G444300 Sobic004G355500 Sobic004G355500 Sobic001G456500--Sobic004G355500 Sobic001G069700 Sobic001G069700 Sobic006G218600--Sobic001G069700 Sobic003G442300 Sobic003G442300 Sobic006G218600--Sobic003G442300 Sobic003G277300 Sobic003G277300 Sobic006G218600--Sobic003G277300 Sobic006G218600--Sobic001G013400 Sobic006G218600--Sobic001G456500 Sobic006G134900 Sobic006G134900 Sobic006G218600--Sobic006G134900 Sobic006G218600--Sobic005G098600 Sobic006G218600--Sobic001G105800 Sobic006G218600--Sobic001G142000 Sobic003G444300--Sobic001G456500 Sobic003G444300--Sobic001G083300 Sobic003G444300--Sobic001G169800 Sobic003G444300--Sobic001G105800 Sobic003G444300--Sobic001G142000 Sobic003G444300--Sobic004G331600 Sobic003G201000 Sobic003G201000 Sobic003G444300--Sobic003G201000 Sobic002G303800 Sobic002G303800 Sobic003G444300--Sobic002G303800 Sobic010G105400 Sobic010G105400 Sobic003G444300--Sobic010G105400 Sobic004G327600--Sobic001G105800 Sobic002G289800 Sobic002G289800 Sobic004G327600--Sobic002G289800 Sobic002G128000 Sobic002G128000 Sobic004G327600--Sobic002G128000 Sobic003G085900 Sobic003G085900 Sobic004G327600--Sobic003G085900 Sobic010G092400 Sobic010G092400 Sobic004G327600--Sobic010G092400 Sobic001G289900 Sobic001G289900 Sobic004G327600--Sobic001G289900 Sobic004G327600--Sobic004G075900 Sobic005G062600 Sobic005G062600 Sobic004G327600--Sobic005G062600 Sobic004G327600--Sobic003G444300 Sobic010G003100--Sobic004G257600 Sobic007G100600 Sobic007G100600 Sobic010G003100--Sobic007G100600 Sobic010G003100--Sobic001G142000 Sobic002G255500 Sobic002G255500 Sobic010G003100--Sobic002G255500 Sobic001G029800 Sobic001G029800 Sobic010G003100--Sobic001G029800 Sobic002G191000 Sobic002G191000 Sobic010G003100--Sobic002G191000 Sobic010G008900 Sobic010G008900 Sobic010G003100--Sobic010G008900 Sobic001G177900 Sobic001G177900 Sobic010G003100--Sobic001G177900 Sobic001G070300 Sobic001G070300 Sobic010G003100--Sobic001G070300 Sobic003G260700 Sobic003G260700 Sobic004G257600--Sobic003G260700 Sobic003G387700 Sobic003G387700 Sobic004G257600--Sobic003G387700 Sobic001G398400 Sobic001G398400 Sobic004G257600--Sobic001G398400 Sobic004G257600--Sobic001G177900 Sobic004G198100 Sobic004G198100 Sobic004G257600--Sobic004G198100 Sobic001G170800 Sobic001G170800 Sobic004G257600--Sobic001G170800 Sobic003G444100 Sobic003G444100 Sobic004G257600--Sobic003G444100 Sobic007G168900 Sobic007G168900 Sobic004G257600--Sobic007G168900 Sobic004G339500 Sobic004G339500 Sobic004G257600--Sobic004G339500 Sobic007G007800 Sobic007G007800 Sobic001G105800--Sobic007G007800 Sobic001G105800--Sobic002G223900 Sobic009G184200 Sobic009G184200 Sobic001G105800--Sobic009G184200 Sobic001G105800--Sobic003G444300 Sobic001G105800--Sobic003G387700 Sobic001G105800--Sobic001G083300 Sobic001G105800--Sobic001G456500 Sobic001G105800--Sobic010G105400 Sobic009G172950 Sobic009G172950 Sobic001G105800--Sobic009G172950 Sobic004G075900--Sobic001G142000 Sobic004G075900--Sobic001G105800 Sobic004G075900--Sobic007G007800 Sobic004G075900--Sobic001G013400 Sobic004G075900--Sobic004G331600 Sobic004G075900--Sobic007G100600 Sobic004G075900--Sobic003G444300 Sobic004G075900--Sobic001G456500 Sobic004G075900--Sobic003G387700
Octagon: transcription factors


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