Gene annotation
Transcriptome id Sobic.003G142100.1
Synonym ATBXL3, ATBX3, BXL3, BX3, Sb03g012290, XYL3
Functional annotation beta-D-xylosidase, putative, expressed
UniProt A0A1W0VXA0
Pfam PF14310 PF00933 PF01915
Panther DB PTHR30620 PTHR30620:SF30
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT1G02640 : beta-xylosidase 2
RAP-DB (Rice) LOC_Os01g19220.1 : beta-D-xylosidase, putative, expressed
MaizeGDB (Corn) Zm00025a036035 , Zm00025a051569
Brachypodium KQK04062 , PNT64333
Barley HORVU6Hr1G062820.6 , HORVU6Hr1G062820.8 , HORVU6Hr1G062820.2 , HORVU6Hr1G062820.3 , HORVU6Hr1G062820.1 , HORVU6Hr1G062820.7 , HORVU6Hr1G062820.4 , HORVU6Hr1G062820.5 , HORVU4Hr1G028510.2 , HORVU4Hr1G028510.3
Wheat TraesCS4A02G173100 , TraesCS4A02G173100 , TraesCS6D02G226100 , TraesCS3D02G479300 , TraesCS3D02G479300 , TraesCS6B02G280400 , TraesCS4B02G143900 , TraesCS4B02G143900 , TraesCS6A02G243900 , TraesCS4D02G142500 , TraesCS4D02G142500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G156100 GDSL-like lipase/acylhydrolase, putative, expressed -
2 Sobic.003G283400 GDSL-like lipase/acylhydrolase, putative, expressed -
3 Sobic.003G308100 CSLC1 - cellulose synthase-like family C, expressed -
4 Sobic.003G365800 expressed protein -
5 Sobic.001G271600 transferase family protein, putative, expressed -
6 Sobic.007G094900 glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
7 Sobic.005G020100 CDC45B - Putative DNA replication initiation protein, expressed K06628: cell division control protein 45
8 Sobic.006G235600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@beta-D-xylosidase, putative, expressed K15920: xylan 1,4-beta-xylosidase
9 Sobic.010G204700 LTPL129 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
10 Sobic.006G111100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@pathogenesis-related Bet v I family protein, putative, expressed -
11 Sobic.006G123200 wax synthase isoform 1, putative, expressed -
12 Sobic.007G000500 HMG1/2, putative, expressed -
13 Sobic.010G197300 CSLA9 - cellulose synthase-like family A, expressed K13680: beta-mannan synthase
14 Sobic.004G343700 serine/threonine-protein kinase, putative, expressed -
15 Sobic.009G151100 serine/threonine-protein kinase, putative, expressed -
16 Sobic.002G128000 receptor protein kinase, putative, expressed -
17 Sobic.009G169800 DEFL4 - Defensin and Defensin-like DEFL family, expressed -
18 Sobic.006G218600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBK15 - F-box domain and kelch repeat containing protein, expressed -
19 Sobic.007G007800 DNA repair metallo-beta-lactamase, putative, expressed K15340: DCLRE1A, SNM1A, DNA cross-link repair 1A protein
20 Sobic.004G072900 GDSL-like lipase/acylhydrolase, putative, expressed -


Gene co-expression network
sample Sobic003G142100 Sobic003G142100 Sobic010G156100 Sobic010G156100 Sobic003G142100--Sobic010G156100 Sobic003G283400 Sobic003G283400 Sobic003G142100--Sobic003G283400 Sobic003G308100 Sobic003G308100 Sobic003G142100--Sobic003G308100 Sobic003G365800 Sobic003G365800 Sobic003G142100--Sobic003G365800 Sobic001G271600 Sobic001G271600 Sobic003G142100--Sobic001G271600 Sobic007G094900 Sobic007G094900 Sobic003G142100--Sobic007G094900 Sobic005G020100 Sobic005G020100 Sobic003G142100--Sobic005G020100 Sobic006G235600 Sobic006G235600 Sobic003G142100--Sobic006G235600 Sobic010G204700 Sobic010G204700 Sobic003G142100--Sobic010G204700 Sobic010G156100--Sobic003G308100 Sobic006G111100 Sobic006G111100 Sobic010G156100--Sobic006G111100 Sobic001G495500 Sobic001G495500 Sobic010G156100--Sobic001G495500 Sobic010G156100--Sobic003G142100 Sobic010G156100--Sobic003G283400 Sobic010G156100--Sobic003G365800 Sobic004G072900 Sobic004G072900 Sobic010G156100--Sobic004G072900 Sobic006G123200 Sobic006G123200 Sobic010G156100--Sobic006G123200 Sobic009G151100 Sobic009G151100 Sobic010G156100--Sobic009G151100 Sobic003G283400--Sobic003G365800 Sobic005G104100 Sobic005G104100 Sobic003G283400--Sobic005G104100 Sobic003G283400--Sobic003G142100 Sobic003G283400--Sobic010G156100 Sobic003G283400--Sobic003G308100 Sobic003G283400--Sobic001G271600 Sobic009G129700 Sobic009G129700 Sobic003G283400--Sobic009G129700 Sobic004G344100 Sobic004G344100 Sobic003G283400--Sobic004G344100 Sobic002G341700 Sobic002G341700 Sobic003G283400--Sobic002G341700 Sobic003G308100--Sobic010G156100 Sobic003G308100--Sobic003G365800 Sobic003G308100--Sobic003G142100 Sobic003G308100--Sobic003G283400 Sobic003G308100--Sobic006G111100 Sobic004G101200 Sobic004G101200 Sobic003G308100--Sobic004G101200 Sobic003G383700 Sobic003G383700 Sobic003G308100--Sobic003G383700 Sobic003G308100--Sobic001G271600 Sobic003G308100--Sobic001G495500 Sobic003G365800--Sobic003G308100 Sobic003G365800--Sobic001G271600 Sobic003G365800--Sobic003G283400 Sobic003G365800--Sobic003G142100 Sobic003G365800--Sobic010G156100 Sobic009G169800 Sobic009G169800 Sobic003G365800--Sobic009G169800 Sobic003G295100 Sobic003G295100 Sobic003G365800--Sobic003G295100 Sobic003G365800--Sobic005G020100 Sobic003G365800--Sobic009G151100 Sobic001G271600--Sobic003G365800 Sobic001G271600--Sobic005G020100 Sobic003G374100 Sobic003G374100 Sobic001G271600--Sobic003G374100 Sobic006G107500 Sobic006G107500 Sobic001G271600--Sobic006G107500 Sobic006G228000 Sobic006G228000 Sobic001G271600--Sobic006G228000 Sobic001G271600--Sobic003G295100 Sobic003G090600 Sobic003G090600 Sobic001G271600--Sobic003G090600 Sobic001G271600--Sobic009G169800 Sobic003G085900 Sobic003G085900 Sobic001G271600--Sobic003G085900 Sobic007G094900--Sobic006G123200 Sobic007G094900--Sobic003G142100 Sobic007G094900--Sobic006G235600 Sobic004G331600 Sobic004G331600 Sobic007G094900--Sobic004G331600 Sobic007G094900--Sobic010G156100 Sobic007G000700 Sobic007G000700 Sobic007G094900--Sobic007G000700 Sobic001G456500 Sobic001G456500 Sobic007G094900--Sobic001G456500 Sobic010G054600 Sobic010G054600 Sobic007G094900--Sobic010G054600 Sobic008G129200 Sobic008G129200 Sobic007G094900--Sobic008G129200 Sobic007G007800 Sobic007G007800 Sobic005G020100--Sobic007G007800 Sobic005G020100--Sobic001G271600 Sobic007G000500 Sobic007G000500 Sobic005G020100--Sobic007G000500 Sobic005G020100--Sobic003G085900 Sobic005G020100--Sobic010G204700 Sobic005G020100--Sobic003G374100 Sobic010G269700 Sobic010G269700 Sobic005G020100--Sobic010G269700 Sobic002G272300 Sobic002G272300 Sobic005G020100--Sobic002G272300 Sobic005G020100--Sobic006G228000 Sobic003G361200 Sobic003G361200 Sobic006G235600--Sobic003G361200 Sobic003G289800 Sobic003G289800 Sobic006G235600--Sobic003G289800 Sobic006G235600--Sobic001G456500 Sobic006G235600--Sobic002G272300 Sobic006G235600--Sobic004G331600 Sobic009G087000 Sobic009G087000 Sobic006G235600--Sobic009G087000 Sobic006G235600--Sobic008G129200 Sobic004G238801 Sobic004G238801 Sobic006G235600--Sobic004G238801 Sobic006G235600--Sobic010G156100 Sobic010G204700--Sobic003G374100 Sobic010G204700--Sobic005G020100 Sobic010G230000 Sobic010G230000 Sobic010G204700--Sobic010G230000 Sobic007G121650 Sobic007G121650 Sobic010G204700--Sobic007G121650 Sobic010G204700--Sobic007G007800 Sobic010G204700--Sobic004G238801 Sobic003G444000 Sobic003G444000 Sobic010G204700--Sobic003G444000 Sobic010G204700--Sobic006G111100 Sobic001G439400 Sobic001G439400 Sobic010G204700--Sobic001G439400
Octagon: transcription factors


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