Gene annotation
Transcriptome id Sobic.003G308100.1
Synonym CSLC12, ATCSLC12, Sb03g035660
Functional annotation CSLC1 - cellulose synthase-like family C, expressed
UniProt A0A1B6Q6A9
Pfam PF13632
Panther DB PTHR32044 PTHR32044:SF15
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G07960 : Cellulose-synthase-like C12
RAP-DB (Rice) LOC_Os01g56130.1 : CSLC1 - cellulose synthase-like family C, expressed
MaizeGDB (Corn) Zm00025a039942 , Zm00025a027415
Brachypodium KQK20919 , PNT72924 , KQK05454
Barley HORVU7Hr1G008410.1 , HORVU3Hr1G074570.2 , HORVU3Hr1G074570.3 , HORVU3Hr1G074570.1 , HORVU3Hr1G074570.6 , HORVU3Hr1G074570.7 , HORVU3Hr1G074570.4 , HORVU3Hr1G074570.5 , HORVU3Hr1G074570.8 , HORVU3Hr1G074570.9 , HORVU3Hr1G074570.10 , HORVU3Hr1G074570.11 , HORVU3Hr1G074570.12 , HORVU3Hr1G074570.13
Wheat TraesCS3A02G299500 , TraesCS3B02G337100 , TraesCS3D02G302300 , TraesCS5A02G405700 , TraesCS5A02G405700 , TraesCS5D02G415700 , TraesCS5D02G415700 , TraesCS5B02G410400 , TraesCS5B02G410400
Populus PNT49181 , PNT36774


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cDNA sequences
Sobic.003G308100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G156100 GDSL-like lipase/acylhydrolase, putative, expressed -
2 Sobic.003G365800 expressed protein -
3 Sobic.003G142100 beta-D-xylosidase, putative, expressed -
4 Sobic.003G283400 GDSL-like lipase/acylhydrolase, putative, expressed -
5 Sobic.006G111100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@pathogenesis-related Bet v I family protein, putative, expressed -
6 Sobic.004G101200 meiosis 5, putative, expressed -
7 Sobic.003G383700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
8 Sobic.001G271600 transferase family protein, putative, expressed -
9 Sobic.001G495500 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
10 Sobic.005G020100 CDC45B - Putative DNA replication initiation protein, expressed K06628: cell division control protein 45
11 Sobic.009G151100 serine/threonine-protein kinase, putative, expressed -
12 Sobic.009G226200 expressed protein -
13 Sobic.007G125600 expressed protein -
14 Sobic.004G215500 GDSL-like lipase/acylhydrolase, putative, expressed -
15 Sobic.009G169800 DEFL4 - Defensin and Defensin-like DEFL family, expressed -
16 Sobic.003G295100 GDSL-like lipase/acylhydrolase, putative, expressed -
17 Sobic.003G374100 beta-galactosidase precursor, putative, expressed -
18 Sobic.010G197300 CSLA9 - cellulose synthase-like family A, expressed K13680: beta-mannan synthase
19 Sobic.010G204700 LTPL129 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
20 Sobic.005G070800 - -


Gene co-expression network
sample Sobic003G308100 Sobic003G308100 Sobic010G156100 Sobic010G156100 Sobic003G308100--Sobic010G156100 Sobic003G365800 Sobic003G365800 Sobic003G308100--Sobic003G365800 Sobic003G142100 Sobic003G142100 Sobic003G308100--Sobic003G142100 Sobic003G283400 Sobic003G283400 Sobic003G308100--Sobic003G283400 Sobic006G111100 Sobic006G111100 Sobic003G308100--Sobic006G111100 Sobic004G101200 Sobic004G101200 Sobic003G308100--Sobic004G101200 Sobic003G383700 Sobic003G383700 Sobic003G308100--Sobic003G383700 Sobic001G271600 Sobic001G271600 Sobic003G308100--Sobic001G271600 Sobic001G495500 Sobic001G495500 Sobic003G308100--Sobic001G495500 Sobic010G156100--Sobic003G308100 Sobic010G156100--Sobic006G111100 Sobic010G156100--Sobic001G495500 Sobic010G156100--Sobic003G142100 Sobic010G156100--Sobic003G283400 Sobic010G156100--Sobic003G365800 Sobic004G072900 Sobic004G072900 Sobic010G156100--Sobic004G072900 Sobic006G123200 Sobic006G123200 Sobic010G156100--Sobic006G123200 Sobic009G151100 Sobic009G151100 Sobic010G156100--Sobic009G151100 Sobic003G365800--Sobic003G308100 Sobic003G365800--Sobic001G271600 Sobic003G365800--Sobic003G283400 Sobic003G365800--Sobic003G142100 Sobic003G365800--Sobic010G156100 Sobic009G169800 Sobic009G169800 Sobic003G365800--Sobic009G169800 Sobic003G295100 Sobic003G295100 Sobic003G365800--Sobic003G295100 Sobic005G020100 Sobic005G020100 Sobic003G365800--Sobic005G020100 Sobic003G365800--Sobic009G151100 Sobic003G142100--Sobic010G156100 Sobic003G142100--Sobic003G283400 Sobic003G142100--Sobic003G308100 Sobic003G142100--Sobic003G365800 Sobic003G142100--Sobic001G271600 Sobic007G094900 Sobic007G094900 Sobic003G142100--Sobic007G094900 Sobic003G142100--Sobic005G020100 Sobic006G235600 Sobic006G235600 Sobic003G142100--Sobic006G235600 Sobic010G204700 Sobic010G204700 Sobic003G142100--Sobic010G204700 Sobic003G283400--Sobic003G365800 Sobic005G104100 Sobic005G104100 Sobic003G283400--Sobic005G104100 Sobic003G283400--Sobic003G142100 Sobic003G283400--Sobic010G156100 Sobic003G283400--Sobic003G308100 Sobic003G283400--Sobic001G271600 Sobic009G129700 Sobic009G129700 Sobic003G283400--Sobic009G129700 Sobic004G344100 Sobic004G344100 Sobic003G283400--Sobic004G344100 Sobic002G341700 Sobic002G341700 Sobic003G283400--Sobic002G341700 Sobic003G374100 Sobic003G374100 Sobic006G111100--Sobic003G374100 Sobic003G274000 Sobic003G274000 Sobic006G111100--Sobic003G274000 Sobic002G121900 Sobic002G121900 Sobic006G111100--Sobic002G121900 Sobic006G111100--Sobic010G156100 Sobic006G111100--Sobic004G101200 Sobic006G111100--Sobic004G072900 Sobic001G152901 Sobic001G152901 Sobic006G111100--Sobic001G152901 Sobic001G287900 Sobic001G287900 Sobic006G111100--Sobic001G287900 Sobic001G137800 Sobic001G137800 Sobic006G111100--Sobic001G137800 Sobic009G219500 Sobic009G219500 Sobic004G101200--Sobic009G219500 Sobic004G101200--Sobic006G111100 Sobic004G101200--Sobic001G137800 Sobic001G235200 Sobic001G235200 Sobic004G101200--Sobic001G235200 Sobic006G213900 Sobic006G213900 Sobic004G101200--Sobic006G213900 Sobic004G101200--Sobic003G374100 Sobic002G076600 Sobic002G076600 Sobic004G101200--Sobic002G076600 Sobic001G235100 Sobic001G235100 Sobic004G101200--Sobic001G235100 Sobic003G129200 Sobic003G129200 Sobic004G101200--Sobic003G129200 Sobic003G383700--Sobic001G271600 Sobic003G383700--Sobic003G295100 Sobic003G383700--Sobic003G308100 Sobic003G383700--Sobic003G365800 Sobic004G229700 Sobic004G229700 Sobic003G383700--Sobic004G229700 Sobic003G383700--Sobic003G374100 Sobic003G383700--Sobic004G101200 Sobic003G090600 Sobic003G090600 Sobic003G383700--Sobic003G090600 Sobic007G128100 Sobic007G128100 Sobic003G383700--Sobic007G128100 Sobic001G271600--Sobic003G365800 Sobic001G271600--Sobic005G020100 Sobic001G271600--Sobic003G374100 Sobic006G107500 Sobic006G107500 Sobic001G271600--Sobic006G107500 Sobic006G228000 Sobic006G228000 Sobic001G271600--Sobic006G228000 Sobic001G271600--Sobic003G295100 Sobic001G271600--Sobic003G090600 Sobic001G271600--Sobic009G169800 Sobic003G085900 Sobic003G085900 Sobic001G271600--Sobic003G085900 Sobic001G495500--Sobic010G156100 Sobic001G495500--Sobic003G274000 Sobic006G227100 Sobic006G227100 Sobic001G495500--Sobic006G227100 Sobic009G125200 Sobic009G125200 Sobic001G495500--Sobic009G125200 Sobic005G151400 Sobic005G151400 Sobic001G495500--Sobic005G151400 Sobic002G027100 Sobic002G027100 Sobic001G495500--Sobic002G027100 Sobic001G495500--Sobic006G111100 Sobic006G131100 Sobic006G131100 Sobic001G495500--Sobic006G131100 Sobic005G179700 Sobic005G179700 Sobic001G495500--Sobic005G179700
Octagon: transcription factors


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