Gene annotation
Transcriptome id Sobic.001G495500.1
Synonym KCS20, Sb01g046290
Functional annotation 3-ketoacyl-CoA synthase, putative, expressed
UniProt C5WWX3
Pfam PF08541 PF08392
Panther DB PTHR31561 PTHR31561:SF13
NCBI CDD -
KEGG Orthology K15397; 3-ketoacyl-CoA synthase
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups GO:0008610lipid biosynthetic process GO:0016020membrane GO:0006633fatty acid biosynthetic process


Orthologs (automatic annotation)
TAIR AT2G26640 : 3-ketoacyl-CoA synthase 11
RAP-DB (Rice) LOC_Os10g28060.1 : 3-ketoacyl-CoA synthase, putative, expressed
MaizeGDB (Corn) Zm00025a051234 , Zm00025a020257 , Zm00025a029505 , Zm00025a044659 , Zm00025a006916 , Zm00025a003809 , Zm00025a036645 , Zm00025a017777 , Zm00025a001341 , Zm00025a000774 , Zm00025a028880
Brachypodium KQJ96727 , KQJ88016 , KQK22844 , PNT75706 , KQK17805 , KQK23503
Barley HORVU4Hr1G067340.4 , HORVU4Hr1G073840.2 , HORVU4Hr1G073840.3 , HORVU4Hr1G073840.4 , HORVU4Hr1G073840.5 , HORVU4Hr1G073840.6 , HORVU4Hr1G073840.7 , HORVU4Hr1G073840.8 , HORVU1Hr1G086760.1 , HORVU0Hr1G038430.1 , HORVU1Hr1G084940.2 , HORVU1Hr1G084940.3 , HORVU1Hr1G084940.1 , HORVU1Hr1G084940.4 , HORVU1Hr1G084940.5 , HORVU4Hr1G072960.1 , HORVU4Hr1G067340.2 , HORVU4Hr1G067340.3 , HORVU4Hr1G067340.1 , HORVU4Hr1G063420.5 , HORVU4Hr1G063420.4 , HORVU4Hr1G063420.3 , HORVU4Hr1G063420.2 , HORVU4Hr1G063420.1
Wheat TraesCS4A02G065300 , TraesCS1D02G374700 , TraesCS1B02G387800 , TraesCS4D02G242200 , TraesCS4D02G277300 , TraesCS6B02G473900 , TraesCS1B02G387800 , TraesCS1A02G369100 , TraesCS6A02G415500 , TraesCS6A02G415500 , TraesCS4A02G025300 , TraesCS4B02G278800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G156100 GDSL-like lipase/acylhydrolase, putative, expressed -
2 Sobic.003G274000 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
3 Sobic.006G227100 leucoanthocyanidin reductase, putative, expressed K08695: anthocyanidin reductase
4 Sobic.009G125200 GASR6 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed -
5 Sobic.005G151400 dnaJ domain containing protein, expressed -
6 Sobic.002G027100 ZOS1-07 - C2H2 zinc finger protein, expressed -
7 Sobic.006G111100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@pathogenesis-related Bet v I family protein, putative, expressed -
8 Sobic.006G131100 - -
9 Sobic.005G179700 OsMADS89 - MADS-box family gene with M-gamma type-box, expressed -
10 Sobic.005G064400 eukaryotic aspartyl protease domain containing protein, expressed -
11 Sobic.006G006100 expressed protein -
12 Sobic.006G007001 - -
13 Sobic.010G129300 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
14 Sobic.002G352501 - -
15 Sobic.005G081800 LTPL33 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
16 Sobic.002G076600 rc - bHLH transcription factor regulating proanthocyanidin production in seeds, expressed -
17 Sobic.004G029500 - -
18 Sobic.006G006000 expressed protein -
19 Sobic.002G095000 DEFL72 - Defensin and Defensin-like DEFL family -
20 Sobic.005G200400 - -


Gene co-expression network
sample Sobic001G495500 Sobic001G495500 Sobic010G156100 Sobic010G156100 Sobic001G495500--Sobic010G156100 Sobic003G274000 Sobic003G274000 Sobic001G495500--Sobic003G274000 Sobic006G227100 Sobic006G227100 Sobic001G495500--Sobic006G227100 Sobic009G125200 Sobic009G125200 Sobic001G495500--Sobic009G125200 Sobic005G151400 Sobic005G151400 Sobic001G495500--Sobic005G151400 Sobic002G027100 Sobic002G027100 Sobic001G495500--Sobic002G027100 Sobic006G111100 Sobic006G111100 Sobic001G495500--Sobic006G111100 Sobic006G131100 Sobic006G131100 Sobic001G495500--Sobic006G131100 Sobic005G179700 Sobic005G179700 Sobic001G495500--Sobic005G179700 Sobic003G308100 Sobic003G308100 Sobic010G156100--Sobic003G308100 Sobic010G156100--Sobic006G111100 Sobic010G156100--Sobic001G495500 Sobic003G142100 Sobic003G142100 Sobic010G156100--Sobic003G142100 Sobic003G283400 Sobic003G283400 Sobic010G156100--Sobic003G283400 Sobic003G365800 Sobic003G365800 Sobic010G156100--Sobic003G365800 Sobic004G072900 Sobic004G072900 Sobic010G156100--Sobic004G072900 Sobic006G123200 Sobic006G123200 Sobic010G156100--Sobic006G123200 Sobic009G151100 Sobic009G151100 Sobic010G156100--Sobic009G151100 Sobic008G031000 Sobic008G031000 Sobic003G274000--Sobic008G031000 Sobic003G274000--Sobic006G131100 Sobic003G411100 Sobic003G411100 Sobic003G274000--Sobic003G411100 Sobic008G048600 Sobic008G048600 Sobic003G274000--Sobic008G048600 Sobic001G324600 Sobic001G324600 Sobic003G274000--Sobic001G324600 Sobic001G287900 Sobic001G287900 Sobic003G274000--Sobic001G287900 Sobic006G144101 Sobic006G144101 Sobic003G274000--Sobic006G144101 Sobic004G014700 Sobic004G014700 Sobic003G274000--Sobic004G014700 Sobic002G345500 Sobic002G345500 Sobic003G274000--Sobic002G345500 Sobic009G039200 Sobic009G039200 Sobic006G227100--Sobic009G039200 Sobic005G098300 Sobic005G098300 Sobic006G227100--Sobic005G098300 Sobic005G147100 Sobic005G147100 Sobic006G227100--Sobic005G147100 Sobic008G188300 Sobic008G188300 Sobic006G227100--Sobic008G188300 Sobic010G010500 Sobic010G010500 Sobic006G227100--Sobic010G010500 Sobic005G223000 Sobic005G223000 Sobic006G227100--Sobic005G223000 Sobic008G120200 Sobic008G120200 Sobic006G227100--Sobic008G120200 Sobic005G221100 Sobic005G221100 Sobic006G227100--Sobic005G221100 Sobic010G191500 Sobic010G191500 Sobic006G227100--Sobic010G191500 Sobic009G125200--Sobic003G274000 Sobic009G125200--Sobic002G027100 Sobic003G443900 Sobic003G443900 Sobic009G125200--Sobic003G443900 Sobic009G125200--Sobic002G345500 Sobic005G153300 Sobic005G153300 Sobic009G125200--Sobic005G153300 Sobic002G053201 Sobic002G053201 Sobic009G125200--Sobic002G053201 Sobic002G162200 Sobic002G162200 Sobic009G125200--Sobic002G162200 Sobic008G071200 Sobic008G071200 Sobic009G125200--Sobic008G071200 Sobic008G182200 Sobic008G182200 Sobic009G125200--Sobic008G182200 Sobic004G029500 Sobic004G029500 Sobic005G151400--Sobic004G029500 Sobic002G058100 Sobic002G058100 Sobic005G151400--Sobic002G058100 Sobic002G095000 Sobic002G095000 Sobic005G151400--Sobic002G095000 Sobic010G191400 Sobic010G191400 Sobic005G151400--Sobic010G191400 Sobic010G129300 Sobic010G129300 Sobic005G151400--Sobic010G129300 Sobic005G081800 Sobic005G081800 Sobic005G151400--Sobic005G081800 Sobic005G027200 Sobic005G027200 Sobic005G151400--Sobic005G027200 Sobic006G006000 Sobic006G006000 Sobic005G151400--Sobic006G006000 Sobic001G349600 Sobic001G349600 Sobic005G151400--Sobic001G349600 Sobic007G047050 Sobic007G047050 Sobic002G027100--Sobic007G047050 Sobic002G027100--Sobic009G125200 Sobic006G021500 Sobic006G021500 Sobic002G027100--Sobic006G021500 SobicK020400 SobicK020400 Sobic002G027100--SobicK020400 Sobic002G027100--Sobic005G151400 Sobic006G178900 Sobic006G178900 Sobic002G027100--Sobic006G178900 Sobic007G106200 Sobic007G106200 Sobic002G027100--Sobic007G106200 Sobic002G027100--Sobic001G495500 Sobic002G096400 Sobic002G096400 Sobic002G027100--Sobic002G096400 Sobic003G374100 Sobic003G374100 Sobic006G111100--Sobic003G374100 Sobic006G111100--Sobic003G274000 Sobic002G121900 Sobic002G121900 Sobic006G111100--Sobic002G121900 Sobic006G111100--Sobic010G156100 Sobic004G101200 Sobic004G101200 Sobic006G111100--Sobic004G101200 Sobic006G111100--Sobic004G072900 Sobic001G152901 Sobic001G152901 Sobic006G111100--Sobic001G152901 Sobic006G111100--Sobic001G287900 Sobic001G137800 Sobic001G137800 Sobic006G111100--Sobic001G137800 Sobic006G131100--Sobic004G014700 Sobic006G131100--Sobic008G048600 Sobic006G189500 Sobic006G189500 Sobic006G131100--Sobic006G189500 Sobic004G195400 Sobic004G195400 Sobic006G131100--Sobic004G195400 Sobic006G131100--Sobic003G411100 Sobic002G076600 Sobic002G076600 Sobic006G131100--Sobic002G076600 Sobic006G131100--Sobic006G144101 Sobic006G006100 Sobic006G006100 Sobic006G131100--Sobic006G006100 Sobic005G064400 Sobic005G064400 Sobic006G131100--Sobic005G064400 Sobic002G352501 Sobic002G352501 Sobic005G179700--Sobic002G352501 Sobic005G179700--Sobic005G064400 Sobic005G200400 Sobic005G200400 Sobic005G179700--Sobic005G200400 Sobic006G007001 Sobic006G007001 Sobic005G179700--Sobic006G007001 Sobic002G352401 Sobic002G352401 Sobic005G179700--Sobic002G352401 Sobic005G179700--Sobic006G144101 Sobic005G179700--Sobic010G129300 Sobic005G179700--Sobic005G081800 Sobic005G179700--Sobic006G006100
Octagon: transcription factors


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