Gene annotation
Transcriptome id Sobic.009G169800.1
Synonym
Functional annotation DEFL4 - Defensin and Defensin-like DEFL family, expressed
UniProt A0A1B6P964
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g61360.1 : DEFL4 - Defensin and Defensin-like DEFL family, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G271600 transferase family protein, putative, expressed -
2 Sobic.005G020100 CDC45B - Putative DNA replication initiation protein, expressed K06628: cell division control protein 45
3 Sobic.006G107500 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
4 Sobic.003G365800 expressed protein -
5 Sobic.006G228000 glycine-rich protein 2, putative -
6 Sobic.002G430700 glycosyltransferase family 43 protein, putative, expressed -
7 Sobic.010G087600 heat shock 22 kDa protein, mitochondrial precursor, putative, expressed K13993: HSP20 family protein
8 Sobic.003G085900 Glycosyl hydrolase. predicted target of sbi-miR-5568 and sbi-miR-6220 expressed in the stems of sweet sorghum(PubMedID : 26117170)@glycosyl hydrolase, family 31, putative, expressed K15925: alpha-D-xyloside xylohydrolase
9 Sobic.003G374100 beta-galactosidase precursor, putative, expressed -
10 Sobic.004G215500 GDSL-like lipase/acylhydrolase, putative, expressed -
11 Sobic.003G090600 seven in absentia protein family protein, putative, expressed -
12 Sobic.003G443800 expressed protein -
13 Sobic.002G360600 expressed protein -
14 Sobic.007G023100 CCT motif family protein, expressed -
15 Sobic.010G092400 glycosyl transferase 8 domain containing protein, putative, expressed -
16 Sobic.010G269700 expressed protein -
17 Sobic.004G343700 serine/threonine-protein kinase, putative, expressed -
18 Sobic.003G373900 universal stress protein domain containing protein, putative, expressed -
19 Sobic.007G125600 expressed protein -
20 Sobic.001G464800 cyclin, putative, expressed K18811: cyclin D5, plant


Gene co-expression network
sample Sobic009G169800 Sobic009G169800 Sobic001G271600 Sobic001G271600 Sobic009G169800--Sobic001G271600 Sobic005G020100 Sobic005G020100 Sobic009G169800--Sobic005G020100 Sobic006G107500 Sobic006G107500 Sobic009G169800--Sobic006G107500 Sobic003G365800 Sobic003G365800 Sobic009G169800--Sobic003G365800 Sobic006G228000 Sobic006G228000 Sobic009G169800--Sobic006G228000 Sobic002G430700 Sobic002G430700 Sobic009G169800--Sobic002G430700 Sobic010G087600 Sobic010G087600 Sobic009G169800--Sobic010G087600 Sobic003G085900 Sobic003G085900 Sobic009G169800--Sobic003G085900 Sobic003G374100 Sobic003G374100 Sobic009G169800--Sobic003G374100 Sobic001G271600--Sobic003G365800 Sobic001G271600--Sobic005G020100 Sobic001G271600--Sobic003G374100 Sobic001G271600--Sobic006G107500 Sobic001G271600--Sobic006G228000 Sobic003G295100 Sobic003G295100 Sobic001G271600--Sobic003G295100 Sobic003G090600 Sobic003G090600 Sobic001G271600--Sobic003G090600 Sobic001G271600--Sobic009G169800 Sobic001G271600--Sobic003G085900 Sobic007G007800 Sobic007G007800 Sobic005G020100--Sobic007G007800 Sobic005G020100--Sobic001G271600 Sobic007G000500 Sobic007G000500 Sobic005G020100--Sobic007G000500 Sobic005G020100--Sobic003G085900 Sobic010G204700 Sobic010G204700 Sobic005G020100--Sobic010G204700 Sobic005G020100--Sobic003G374100 Sobic010G269700 Sobic010G269700 Sobic005G020100--Sobic010G269700 Sobic002G272300 Sobic002G272300 Sobic005G020100--Sobic002G272300 Sobic005G020100--Sobic006G228000 Sobic002G360600 Sobic002G360600 Sobic006G107500--Sobic002G360600 Sobic010G070900 Sobic010G070900 Sobic006G107500--Sobic010G070900 Sobic006G107500--Sobic010G087600 Sobic006G107500--Sobic003G085900 Sobic006G163300 Sobic006G163300 Sobic006G107500--Sobic006G163300 Sobic009G146700 Sobic009G146700 Sobic006G107500--Sobic009G146700 Sobic007G147200 Sobic007G147200 Sobic006G107500--Sobic007G147200 Sobic006G107500--Sobic002G430700 Sobic003G338700 Sobic003G338700 Sobic006G107500--Sobic003G338700 Sobic003G308100 Sobic003G308100 Sobic003G365800--Sobic003G308100 Sobic003G365800--Sobic001G271600 Sobic003G283400 Sobic003G283400 Sobic003G365800--Sobic003G283400 Sobic003G142100 Sobic003G142100 Sobic003G365800--Sobic003G142100 Sobic010G156100 Sobic010G156100 Sobic003G365800--Sobic010G156100 Sobic003G365800--Sobic009G169800 Sobic003G365800--Sobic003G295100 Sobic003G365800--Sobic005G020100 Sobic009G151100 Sobic009G151100 Sobic003G365800--Sobic009G151100 Sobic001G137800 Sobic001G137800 Sobic006G228000--Sobic001G137800 Sobic006G228000--Sobic003G374100 Sobic007G043000 Sobic007G043000 Sobic006G228000--Sobic007G043000 Sobic001G235200 Sobic001G235200 Sobic006G228000--Sobic001G235200 Sobic002G237000 Sobic002G237000 Sobic006G228000--Sobic002G237000 Sobic004G234600 Sobic004G234600 Sobic006G228000--Sobic004G234600 Sobic003G092300 Sobic003G092300 Sobic006G228000--Sobic003G092300 Sobic003G300000 Sobic003G300000 Sobic006G228000--Sobic003G300000 Sobic002G121900 Sobic002G121900 Sobic006G228000--Sobic002G121900 Sobic002G430700--Sobic006G107500 Sobic002G430700--Sobic003G085900 Sobic002G430700--Sobic006G163300 Sobic002G430700--Sobic002G360600 Sobic002G430700--Sobic010G070900 Sobic002G430700--Sobic003G090600 Sobic003G046400 Sobic003G046400 Sobic002G430700--Sobic003G046400 Sobic002G430700--Sobic007G147200 Sobic010G014500 Sobic010G014500 Sobic002G430700--Sobic010G014500 Sobic010G087600--Sobic002G360600 Sobic010G087600--Sobic006G107500 Sobic004G215400 Sobic004G215400 Sobic010G087600--Sobic004G215400 Sobic010G087700 Sobic010G087700 Sobic010G087600--Sobic010G087700 Sobic010G087600--Sobic009G146700 Sobic010G014700 Sobic010G014700 Sobic010G087600--Sobic010G014700 Sobic006G068200 Sobic006G068200 Sobic010G087600--Sobic006G068200 Sobic002G363300 Sobic002G363300 Sobic010G087600--Sobic002G363300 Sobic001G108100 Sobic001G108100 Sobic010G087600--Sobic001G108100 Sobic003G085900--Sobic006G107500 Sobic003G085900--Sobic002G360600 Sobic004G237000 Sobic004G237000 Sobic003G085900--Sobic004G237000 Sobic010G092400 Sobic010G092400 Sobic003G085900--Sobic010G092400 Sobic003G085900--Sobic002G430700 Sobic003G085900--Sobic007G147200 Sobic003G085900--Sobic006G163300 Sobic003G085900--Sobic003G046400 Sobic003G316601 Sobic003G316601 Sobic003G085900--Sobic003G316601 Sobic003G374100--Sobic001G137800 Sobic003G374100--Sobic006G228000 Sobic003G129200 Sobic003G129200 Sobic003G374100--Sobic003G129200 Sobic003G374100--Sobic007G043000 Sobic003G374100--Sobic002G121900 Sobic003G374100--Sobic004G234600 Sobic002G053350 Sobic002G053350 Sobic003G374100--Sobic002G053350 Sobic003G374100--Sobic001G235200 Sobic001G235100 Sobic001G235100 Sobic003G374100--Sobic001G235100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.