Gene annotation
Transcriptome id Sobic.010G197300.2,Sobic.010G197300.1,Sobic.010G197300.3
Synonym CSLA09, Sb10g024640, RAT4, ATCSLA9, CSLA9, ATCSLA09
Functional annotation CSLA9 - cellulose synthase-like family A, expressed
UniProt A0A1W0VTZ8 , A0A1W0VTW4 , A0A194YKA1
Pfam PF13641 PF13632
Panther DB PTHR32044
NCBI CDD -
KEGG Orthology K13680; beta-mannan synthase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G03760 : Nucleotide-diphospho-sugar transferases superfamily protein
RAP-DB (Rice) LOC_Os06g42020.1 : CSLA9 - cellulose synthase-like family A, expressed
MaizeGDB (Corn) Zm00025a034690 , Zm00025a051489 , Zm00025a027859 , Zm00025a022027
Brachypodium KQK17607 , KQK01951 , KQJ98402 , KQJ93791
Barley HORVU6Hr1G034630.5 , HORVU6Hr1G034630.6 , HORVU7Hr1G092990.4 , HORVU7Hr1G092990.5 , HORVU7Hr1G092990.1 , HORVU7Hr1G092990.2 , HORVU7Hr1G092990.3 , HORVU6Hr1G034630.9 , HORVU3Hr1G002660.3 , HORVU3Hr1G002660.2 , HORVU3Hr1G002660.1 , HORVU6Hr1G034630.7 , HORVU3Hr1G002660.7 , HORVU3Hr1G002660.6 , HORVU3Hr1G002660.5 , HORVU3Hr1G002660.4 , HORVU7Hr1G092910.5 , HORVU6Hr1G034630.4 , HORVU7Hr1G092910.3 , HORVU6Hr1G034630.3 , HORVU6Hr1G034630.12 , HORVU6Hr1G034630.13 , HORVU6Hr1G034630.10 , HORVU6Hr1G034630.11 , HORVU7Hr1G092910.4 , HORVU7Hr1G092910.2 , HORVU3Hr1G107340.4 , HORVU3Hr1G107340.5 , HORVU3Hr1G107340.6 , HORVU3Hr1G107340.1 , HORVU3Hr1G107340.2 , HORVU3Hr1G107340.3
Wheat TraesCS3D02G485600 , TraesCS3D02G485600 , TraesCS3D02G485600 , TraesCS3A02G496400 , TraesCS3A02G496400 , TraesCS7A02G394000 , TraesCS7D02G389400 , TraesCS3A02G019200 , TraesCS6D02G158600 , TraesCS3D02G504200 , TraesCS7D02G389500 , TraesCS7D02G389500 , TraesCS6A02G169200 , TraesCS7B02G296100 , TraesCS7B02G296000 , TraesCS3D02G027600 , TraesCS3D02G027600 , TraesCS3D02G015000 , TraesCS3B02G540800 , TraesCS6B02G197200 , TraesCS7A02G394100
Populus -


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cDNA sequences
Sobic.010G197300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G134700 endoglucanase, putative, expressed -
2 Sobic.003G063700 - -
3 Sobic.001G235200 MYB family transcription factor, putative, expressed -
4 Sobic.006G163200 COBRA, putative, expressed -
5 Sobic.003G365800 expressed protein -
6 Sobic.009G211300 MATH domain containing protein, expressed -
7 Sobic.002G159000 60S ribosomal protein L22-2, putative, expressed K02891: RP-L22e, large subunit ribosomal protein L22e
8 Sobic.004G168000 pectinesterase inhibitor domain containing protein, putative, expressed -
9 Sobic.005G070101 - -
10 Sobic.003G443800 expressed protein -
11 Sobic.002G239101 - -
12 Sobic.006G213900 OsMADS31 - MADS-box family gene with MIKCc type-box, expressed -
13 Sobic.003G295100 GDSL-like lipase/acylhydrolase, putative, expressed -
14 Sobic.003G142100 beta-D-xylosidase, putative, expressed -
15 Sobic.001G141900 OsSub53 - Putative Subtilisin homologue, expressed -
16 Sobic.001G158100 MBTB43 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
17 Sobic.003G308100 CSLC1 - cellulose synthase-like family C, expressed -
18 Sobic.004G299200 expressed protein K10875: RAD54L, DNA repair and recombination protein RAD54 and RAD54-like protein
19 Sobic.003G092300 expressed protein K04506: E3 ubiquitin-protein ligase SIAH1
20 Sobic.005G070800 - -


Gene co-expression network
sample Sobic010G197300 Sobic010G197300 Sobic006G134700 Sobic006G134700 Sobic010G197300--Sobic006G134700 Sobic003G063700 Sobic003G063700 Sobic010G197300--Sobic003G063700 Sobic001G235200 Sobic001G235200 Sobic010G197300--Sobic001G235200 Sobic006G163200 Sobic006G163200 Sobic010G197300--Sobic006G163200 Sobic003G365800 Sobic003G365800 Sobic010G197300--Sobic003G365800 Sobic009G211300 Sobic009G211300 Sobic010G197300--Sobic009G211300 Sobic002G159000 Sobic002G159000 Sobic010G197300--Sobic002G159000 Sobic004G168000 Sobic004G168000 Sobic010G197300--Sobic004G168000 Sobic005G070101 Sobic005G070101 Sobic010G197300--Sobic005G070101 Sobic002G239101 Sobic002G239101 Sobic006G134700--Sobic002G239101 Sobic006G134700--Sobic005G070101 Sobic006G134700--Sobic004G168000 Sobic006G134700--Sobic002G159000 Sobic006G134700--Sobic001G235200 Sobic006G213900 Sobic006G213900 Sobic006G134700--Sobic006G213900 Sobic006G134700--Sobic003G063700 Sobic006G134700--Sobic009G211300 Sobic001G459400 Sobic001G459400 Sobic006G134700--Sobic001G459400 Sobic003G063700--Sobic001G235200 Sobic003G063700--Sobic009G211300 Sobic003G063700--Sobic006G134700 Sobic003G063700--Sobic006G213900 Sobic001G158100 Sobic001G158100 Sobic003G063700--Sobic001G158100 Sobic001G216400 Sobic001G216400 Sobic003G063700--Sobic001G216400 Sobic003G063700--Sobic002G239101 Sobic001G141900 Sobic001G141900 Sobic003G063700--Sobic001G141900 Sobic008G138200 Sobic008G138200 Sobic003G063700--Sobic008G138200 Sobic001G235200--Sobic006G213900 Sobic001G235200--Sobic003G063700 Sobic001G235200--Sobic006G134700 Sobic001G235200--Sobic002G239101 Sobic001G137800 Sobic001G137800 Sobic001G235200--Sobic001G137800 Sobic001G235200--Sobic002G159000 Sobic001G235200--Sobic004G168000 Sobic001G235200--Sobic005G070101 Sobic001G235200--Sobic009G211300 Sobic005G070800 Sobic005G070800 Sobic006G163200--Sobic005G070800 Sobic002G076600 Sobic002G076600 Sobic006G163200--Sobic002G076600 Sobic006G163200--Sobic001G235200 Sobic004G195400 Sobic004G195400 Sobic006G163200--Sobic004G195400 Sobic008G143300 Sobic008G143300 Sobic006G163200--Sobic008G143300 Sobic006G189500 Sobic006G189500 Sobic006G163200--Sobic006G189500 Sobic006G163200--Sobic006G213900 Sobic004G014700 Sobic004G014700 Sobic006G163200--Sobic004G014700 Sobic001G152901 Sobic001G152901 Sobic006G163200--Sobic001G152901 Sobic003G308100 Sobic003G308100 Sobic003G365800--Sobic003G308100 Sobic001G271600 Sobic001G271600 Sobic003G365800--Sobic001G271600 Sobic003G283400 Sobic003G283400 Sobic003G365800--Sobic003G283400 Sobic003G142100 Sobic003G142100 Sobic003G365800--Sobic003G142100 Sobic010G156100 Sobic010G156100 Sobic003G365800--Sobic010G156100 Sobic009G169800 Sobic009G169800 Sobic003G365800--Sobic009G169800 Sobic003G295100 Sobic003G295100 Sobic003G365800--Sobic003G295100 Sobic005G020100 Sobic005G020100 Sobic003G365800--Sobic005G020100 Sobic009G151100 Sobic009G151100 Sobic003G365800--Sobic009G151100 Sobic009G211300--Sobic003G063700 Sobic009G211300--Sobic001G158100 Sobic009G211300--Sobic006G134700 Sobic009G211300--Sobic001G235200 Sobic009G211300--Sobic001G216400 Sobic009G063700 Sobic009G063700 Sobic009G211300--Sobic009G063700 Sobic009G075500 Sobic009G075500 Sobic009G211300--Sobic009G075500 Sobic009G211300--Sobic006G213900 Sobic004G056000 Sobic004G056000 Sobic009G211300--Sobic004G056000 Sobic002G159000--Sobic004G168000 Sobic002G159000--Sobic005G070101 Sobic002G159000--Sobic002G239101 Sobic002G159000--Sobic006G134700 Sobic002G159000--Sobic006G213900 Sobic002G159000--Sobic001G235200 Sobic009G179000 Sobic009G179000 Sobic002G159000--Sobic009G179000 Sobic002G159000--Sobic001G459400 Sobic005G070700 Sobic005G070700 Sobic002G159000--Sobic005G070700 Sobic004G168000--Sobic004G168000 Sobic004G168000--Sobic002G159000 Sobic004G168000--Sobic002G239101 Sobic004G168000--Sobic006G134700 Sobic004G168000--Sobic006G213900 Sobic004G168000--Sobic001G235200 Sobic004G168000--Sobic009G179000 Sobic004G168000--Sobic001G459400 Sobic004G168000--Sobic005G070700 Sobic005G070101--Sobic004G168000 Sobic005G070101--Sobic002G159000 Sobic005G070101--Sobic002G239101 Sobic005G070101--Sobic006G134700 Sobic005G070101--Sobic006G213900 Sobic005G070101--Sobic001G235200 Sobic005G070101--Sobic009G179000 Sobic005G070101--Sobic001G459400 Sobic005G070101--Sobic005G070700
Octagon: transcription factors


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