Gene annotation
Transcriptome id Sobic.007G094900.1
Synonym XTH22, TCH4, Sb07g009410
Functional annotation glycosyl hydrolases family 16, putative, expressed
UniProt C5YJV0
Pfam PF06955 PF00722
Panther DB PTHR31062 PTHR31062:SF45
NCBI CDD -
KEGG Orthology K08235; xyloglucan:xyloglucosyl transferase
Gene Ontology GO:0016762; xyloglucan:xyloglucosyl transferase activity GO:0006073cellular glucan metabolic process GO:0005618cell wall GO:0005975carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT5G57560 : Xyloglucan endotransglucosylase/hydrolase family protein
RAP-DB (Rice) LOC_Os08g13920.1 : glycosyl hydrolases family 16, putative, expressed
MaizeGDB (Corn) Zm00025a054963 , Zm00025a054966 , Zm00025a054577 , Zm00025a054958
Brachypodium KQK13370 , KQK13368 , KQK13369 , KQJ95698 , KQJ95697
Barley HORVU7Hr1G021950.2 , HORVU7Hr1G021950.1 , HORVU1Hr1G087320.3 , HORVU1Hr1G087320.2 , HORVU1Hr1G087320.1 , HORVU3Hr1G016820.1 , HORVU3Hr1G016820.2 , HORVU3Hr1G016820.3 , HORVU3Hr1G016820.5 , HORVU3Hr1G016820.6 , HORVU3Hr1G016850.1 , HORVU3Hr1G016850.3 , HORVU3Hr1G016850.2 , HORVU3Hr1G016850.4 , HORVU3Hr1G016830.1 , HORVU7Hr1G021820.2 , HORVU7Hr1G021820.3 , HORVU7Hr1G021820.1 , HORVU7Hr1G012600.2 , HORVU7Hr1G012600.3 , HORVU7Hr1G012600.4 , HORVU7Hr1G012600.5 , HORVU6Hr1G093230.1 , HORVU6Hr1G093230.2 , HORVU3Hr1G016800.2 , HORVU3Hr1G016800.1
Wheat TraesCS7A02G103600 , TraesCS3B02G108700 , TraesCS7D02G058200 , TraesCS1A02G396200 , TraesCS1D02G404300 , TraesCS3D02G093800 , TraesCS3A02G093400 , TraesCS6A02G408300 , TraesCS3B02G108600 , TraesCS4A02G402200 , TraesCS4A02G402200 , TraesCS3A02G093700 , TraesCS3B02G108800 , TraesCS1B02G424500 , TraesCS7A02G103500 , TraesCS4A02G402300 , TraesCS7D02G097400 , TraesCS3D02G093700 , TraesCS3A02G093600 , TraesCS3D02G094000 , TraesCS7D02G097300 , TraesCS3D02G093900 , TraesCS6B02G454200 , TraesCS7A02G063300 , TraesCS5B02G028800 , TraesCS3A02G093500 , TraesCS6D02G392100 , TraesCS5D02G038400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G123200 wax synthase isoform 1, putative, expressed -
2 Sobic.003G142100 beta-D-xylosidase, putative, expressed -
3 Sobic.006G235600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@beta-D-xylosidase, putative, expressed K15920: xylan 1,4-beta-xylosidase
4 Sobic.004G331600 MCM5 - Putative minichromosome maintenance MCM complex subunit 5, expressed K02209: MCM5, DNA replication licensing factor MCM5
5 Sobic.010G156100 GDSL-like lipase/acylhydrolase, putative, expressed -
6 Sobic.007G000700 choline transporter-related, putative, expressed K15377: solute carrier family 44 (choline transporter-like protein), member 2/4/5
7 Sobic.001G456500 RPA1B - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1
8 Sobic.010G054600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ribonucleoside-diphosphate reductase large subunit, putative, expressed K10807: ribonucleoside-diphosphate reductase subunit M1
9 Sobic.008G129200 MCM7 - Putative minichromosome maintenance MCM complex subunit 7, expressed K02210: MCM7, DNA replication licensing factor MCM7
10 Sobic.010G003100 monocopper oxidase, putative, expressed -
11 Sobic.004G075900 CSLA1 - cellulose synthase-like family A@ mannan synthase, expressed K13680: beta-mannan synthase
12 Sobic.003G361200 CDC6 - Putative DNA replication initiation protein, expressed K02213: cell division control protein 6
13 Sobic.007G007800 DNA repair metallo-beta-lactamase, putative, expressed K15340: DCLRE1A, SNM1A, DNA cross-link repair 1A protein
14 Sobic.009G151100 serine/threonine-protein kinase, putative, expressed -
15 Sobic.001G142000 deoxyuridine 5-triphosphate nucleotidohydrolase, putative, expressed K01520: dut, dUTP pyrophosphatase
16 Sobic.003G308100 CSLC1 - cellulose synthase-like family C, expressed -
17 Sobic.006G081000 protein kinase domain containing protein, expressed K04730: interleukin-1 receptor-associated kinase 1
18 Sobic.002G223900 OsFBX330 - F-box domain containing protein, expressed -
19 Sobic.002G128000 receptor protein kinase, putative, expressed -
20 Sobic.006G116500 expressed protein -


Gene co-expression network
sample Sobic007G094900 Sobic007G094900 Sobic006G123200 Sobic006G123200 Sobic007G094900--Sobic006G123200 Sobic003G142100 Sobic003G142100 Sobic007G094900--Sobic003G142100 Sobic006G235600 Sobic006G235600 Sobic007G094900--Sobic006G235600 Sobic004G331600 Sobic004G331600 Sobic007G094900--Sobic004G331600 Sobic010G156100 Sobic010G156100 Sobic007G094900--Sobic010G156100 Sobic007G000700 Sobic007G000700 Sobic007G094900--Sobic007G000700 Sobic001G456500 Sobic001G456500 Sobic007G094900--Sobic001G456500 Sobic010G054600 Sobic010G054600 Sobic007G094900--Sobic010G054600 Sobic008G129200 Sobic008G129200 Sobic007G094900--Sobic008G129200 Sobic006G123200--Sobic007G094900 Sobic006G123200--Sobic010G156100 Sobic010G230000 Sobic010G230000 Sobic006G123200--Sobic010G230000 Sobic006G123200--Sobic003G142100 Sobic003G308100 Sobic003G308100 Sobic006G123200--Sobic003G308100 Sobic001G439400 Sobic001G439400 Sobic006G123200--Sobic001G439400 Sobic006G123200--Sobic006G235600 Sobic003G015950 Sobic003G015950 Sobic006G123200--Sobic003G015950 Sobic001G495500 Sobic001G495500 Sobic006G123200--Sobic001G495500 Sobic003G142100--Sobic010G156100 Sobic003G283400 Sobic003G283400 Sobic003G142100--Sobic003G283400 Sobic003G142100--Sobic003G308100 Sobic003G365800 Sobic003G365800 Sobic003G142100--Sobic003G365800 Sobic001G271600 Sobic001G271600 Sobic003G142100--Sobic001G271600 Sobic003G142100--Sobic007G094900 Sobic005G020100 Sobic005G020100 Sobic003G142100--Sobic005G020100 Sobic003G142100--Sobic006G235600 Sobic010G204700 Sobic010G204700 Sobic003G142100--Sobic010G204700 Sobic003G361200 Sobic003G361200 Sobic006G235600--Sobic003G361200 Sobic003G289800 Sobic003G289800 Sobic006G235600--Sobic003G289800 Sobic006G235600--Sobic001G456500 Sobic002G272300 Sobic002G272300 Sobic006G235600--Sobic002G272300 Sobic006G235600--Sobic004G331600 Sobic009G087000 Sobic009G087000 Sobic006G235600--Sobic009G087000 Sobic006G235600--Sobic008G129200 Sobic004G238801 Sobic004G238801 Sobic006G235600--Sobic004G238801 Sobic006G235600--Sobic010G156100 Sobic004G331600--Sobic001G456500 Sobic004G331600--Sobic008G129200 Sobic004G331600--Sobic010G054600 Sobic004G331600--Sobic009G087000 Sobic001G142000 Sobic001G142000 Sobic004G331600--Sobic001G142000 Sobic002G223900 Sobic002G223900 Sobic004G331600--Sobic002G223900 Sobic003G183700 Sobic003G183700 Sobic004G331600--Sobic003G183700 Sobic010G147700 Sobic010G147700 Sobic004G331600--Sobic010G147700 Sobic007G007800 Sobic007G007800 Sobic004G331600--Sobic007G007800 Sobic010G156100--Sobic003G308100 Sobic006G111100 Sobic006G111100 Sobic010G156100--Sobic006G111100 Sobic010G156100--Sobic001G495500 Sobic010G156100--Sobic003G142100 Sobic010G156100--Sobic003G283400 Sobic010G156100--Sobic003G365800 Sobic004G072900 Sobic004G072900 Sobic010G156100--Sobic004G072900 Sobic010G156100--Sobic006G123200 Sobic009G151100 Sobic009G151100 Sobic010G156100--Sobic009G151100 Sobic003G401800 Sobic003G401800 Sobic007G000700--Sobic003G401800 Sobic006G081000 Sobic006G081000 Sobic007G000700--Sobic006G081000 Sobic003G226700 Sobic003G226700 Sobic007G000700--Sobic003G226700 Sobic002G320600 Sobic002G320600 Sobic007G000700--Sobic002G320600 Sobic010G092400 Sobic010G092400 Sobic007G000700--Sobic010G092400 Sobic010G078300 Sobic010G078300 Sobic007G000700--Sobic010G078300 Sobic003G078300 Sobic003G078300 Sobic007G000700--Sobic003G078300 Sobic005G062600 Sobic005G062600 Sobic007G000700--Sobic005G062600 Sobic007G000700--Sobic003G289800 Sobic006G116500 Sobic006G116500 Sobic001G456500--Sobic006G116500 Sobic001G456500--Sobic004G331600 Sobic001G456500--Sobic001G142000 Sobic001G083300 Sobic001G083300 Sobic001G456500--Sobic001G083300 Sobic001G456500--Sobic008G129200 Sobic001G456500--Sobic002G223900 Sobic001G169800 Sobic001G169800 Sobic001G456500--Sobic001G169800 Sobic003G444300 Sobic003G444300 Sobic001G456500--Sobic003G444300 Sobic004G355500 Sobic004G355500 Sobic001G456500--Sobic004G355500 Sobic010G054600--Sobic004G331600 Sobic010G054600--Sobic001G142000 Sobic010G054600--Sobic008G129200 Sobic004G119700 Sobic004G119700 Sobic010G054600--Sobic004G119700 Sobic010G054600--Sobic001G456500 Sobic003G201000 Sobic003G201000 Sobic010G054600--Sobic003G201000 Sobic010G054600--Sobic003G361200 Sobic010G054600--Sobic010G147700 Sobic010G054600--Sobic009G087000 Sobic008G129200--Sobic004G331600 Sobic008G129200--Sobic009G087000 Sobic005G110535 Sobic005G110535 Sobic008G129200--Sobic005G110535 Sobic008G129200--Sobic001G456500 Sobic008G129200--Sobic010G147700 Sobic008G129200--Sobic003G183700 Sobic008G129200--Sobic001G083300 Sobic008G129200--Sobic010G054600 Sobic008G129200--Sobic006G116500
Octagon: transcription factors


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