Gene annotation
Transcriptome id Sobic.006G081000.1
Synonym Sb06g016790
Functional annotation protein kinase domain containing protein, expressed
UniProt C5YGH6
Pfam PF00069
Panther DB PTHR27001 PTHR27001:SF187
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology K04730; interleukin-1 receptor-associated kinase 1
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G01540 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os04g35080.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a011391 , Zm00025a020608
Brachypodium KQJ82636 , KQJ99818 , KQK23896
Barley HORVU2Hr1G027940.6 , HORVU2Hr1G027940.7 , HORVU2Hr1G027940.4 , HORVU2Hr1G027940.2 , HORVU2Hr1G027940.3 , HORVU2Hr1G027940.8 , HORVU2Hr1G027940.9 , HORVU2Hr1G075030.7 , HORVU2Hr1G075030.2 , HORVU2Hr1G075030.11 , HORVU2Hr1G075030.10 , HORVU2Hr1G075030.13 , HORVU2Hr1G075030.12 , HORVU2Hr1G075030.14 , HORVU2Hr1G075030.5 , HORVU2Hr1G075030.4 , HORVU2Hr1G075030.6 , HORVU2Hr1G075030.1 , HORVU2Hr1G075030.3 , HORVU2Hr1G075030.9 , HORVU2Hr1G075030.8 , HORVU2Hr1G027940.10 , HORVU2Hr1G027940.11 , HORVU2Hr1G027940.12
Wheat TraesCS4B02G318400 , TraesCS4B02G318400 , TraesCS1A02G272100 , TraesCS2B02G318400 , TraesCS5A02G493800 , TraesCS2A02G154300 , TraesCS2A02G154300 , TraesCS2A02G302500 , TraesCS5A02G493800 , TraesCS1D02G272800 , TraesCS2B02G179500 , TraesCS2D02G301200 , TraesCS1A02G272100 , TraesCS1B02G282100
Populus -


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cDNA sequences
Sobic.006G081000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G274800 protein transport protein-related, putative, expressed -
2 Sobic.001G437500 plant protein of unknown function DUF869 domain containing protein, expressed -
3 Sobic.001G196000 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
4 Sobic.007G000700 choline transporter-related, putative, expressed K15377: solute carrier family 44 (choline transporter-like protein), member 2/4/5
5 Sobic.004G243800 HEAT repeat family protein, putative, expressed -
6 Sobic.002G347900 GDP-fucose protein-O-fucosyltransferase 2, putative, expressed K03691: peptide-O-fucosyltransferase
7 Sobic.007G139500 phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
8 Sobic.003G401800 expressed protein -
9 Sobic.002G276600 endoglucanase, putative, expressed -
10 Sobic.001G051300 BEE 1, putative, expressed -
11 Sobic.008G174966 - -
12 Sobic.001G159800 KIP1, putative, expressed -
13 Sobic.009G061000 DNA binding protein, putative, expressed -
14 Sobic.007G173000 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
15 Sobic.010G228100 "DEP3(Ortholog in rice:Qiao et al., 2011)"(PubMedID : 31659937)@PLA IIIA/PLP7, putative, expressed -
16 Sobic.009G216300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polygalacturonase, putative, expressed -
17 Sobic.006G083700 expressed protein -
18 Sobic.002G320600 HEAT repeat family protein, putative, expressed -
19 Sobic.003G226700 kinesin motor domain containing protein, putative, expressed K10393: KIF2_24, kinesin family member 2/24
20 Sobic.001G201000 protein transport protein-related, putative, expressed -


Gene co-expression network
sample Sobic006G081000 Sobic006G081000 Sobic004G274800 Sobic004G274800 Sobic006G081000--Sobic004G274800 Sobic001G437500 Sobic001G437500 Sobic006G081000--Sobic001G437500 Sobic001G196000 Sobic001G196000 Sobic006G081000--Sobic001G196000 Sobic007G000700 Sobic007G000700 Sobic006G081000--Sobic007G000700 Sobic004G243800 Sobic004G243800 Sobic006G081000--Sobic004G243800 Sobic002G347900 Sobic002G347900 Sobic006G081000--Sobic002G347900 Sobic007G139500 Sobic007G139500 Sobic006G081000--Sobic007G139500 Sobic003G401800 Sobic003G401800 Sobic006G081000--Sobic003G401800 Sobic002G276600 Sobic002G276600 Sobic006G081000--Sobic002G276600 Sobic004G274800--Sobic001G437500 Sobic004G274800--Sobic006G081000 Sobic004G274800--Sobic007G139500 Sobic004G274800--Sobic001G196000 Sobic009G206500 Sobic009G206500 Sobic004G274800--Sobic009G206500 Sobic003G161500 Sobic003G161500 Sobic004G274800--Sobic003G161500 Sobic009G026101 Sobic009G026101 Sobic004G274800--Sobic009G026101 Sobic007G040301 Sobic007G040301 Sobic004G274800--Sobic007G040301 Sobic003G135400 Sobic003G135400 Sobic004G274800--Sobic003G135400 Sobic001G437500--Sobic001G196000 Sobic001G437500--Sobic004G243800 Sobic001G437500--Sobic004G274800 Sobic001G437500--Sobic009G206500 Sobic001G437500--Sobic007G139500 Sobic001G159800 Sobic001G159800 Sobic001G437500--Sobic001G159800 Sobic009G061000 Sobic009G061000 Sobic001G437500--Sobic009G061000 Sobic006G267500 Sobic006G267500 Sobic001G437500--Sobic006G267500 Sobic001G437500--Sobic002G276600 Sobic001G196000--Sobic001G437500 Sobic001G196000--Sobic007G139500 Sobic001G196000--Sobic004G243800 Sobic001G196000--Sobic009G206500 Sobic001G196000--Sobic004G274800 Sobic001G196000--Sobic006G081000 Sobic007G173000 Sobic007G173000 Sobic001G196000--Sobic007G173000 Sobic008G174966 Sobic008G174966 Sobic001G196000--Sobic008G174966 Sobic001G196000--Sobic001G159800 Sobic007G000700--Sobic003G401800 Sobic007G000700--Sobic006G081000 Sobic003G226700 Sobic003G226700 Sobic007G000700--Sobic003G226700 Sobic002G320600 Sobic002G320600 Sobic007G000700--Sobic002G320600 Sobic010G092400 Sobic010G092400 Sobic007G000700--Sobic010G092400 Sobic010G078300 Sobic010G078300 Sobic007G000700--Sobic010G078300 Sobic003G078300 Sobic003G078300 Sobic007G000700--Sobic003G078300 Sobic005G062600 Sobic005G062600 Sobic007G000700--Sobic005G062600 Sobic003G289800 Sobic003G289800 Sobic007G000700--Sobic003G289800 Sobic004G243800--Sobic001G437500 Sobic001G037400 Sobic001G037400 Sobic004G243800--Sobic001G037400 Sobic004G243800--Sobic001G196000 Sobic010G165100 Sobic010G165100 Sobic004G243800--Sobic010G165100 Sobic004G243800--Sobic002G276600 Sobic009G211800 Sobic009G211800 Sobic004G243800--Sobic009G211800 Sobic008G174900 Sobic008G174900 Sobic004G243800--Sobic008G174900 Sobic002G045200 Sobic002G045200 Sobic004G243800--Sobic002G045200 Sobic002G142500 Sobic002G142500 Sobic004G243800--Sobic002G142500 Sobic002G347900--Sobic009G061000 Sobic002G347900--Sobic006G081000 Sobic002G347900--Sobic001G437500 Sobic001G154300 Sobic001G154300 Sobic002G347900--Sobic001G154300 Sobic003G094600 Sobic003G094600 Sobic002G347900--Sobic003G094600 Sobic002G347900--Sobic007G173000 Sobic002G347900--Sobic002G276600 Sobic009G073400 Sobic009G073400 Sobic002G347900--Sobic009G073400 Sobic002G347900--Sobic008G174966 Sobic007G139500--Sobic001G196000 Sobic001G051300 Sobic001G051300 Sobic007G139500--Sobic001G051300 Sobic007G139500--Sobic009G206500 Sobic007G139500--Sobic001G437500 Sobic003G179500 Sobic003G179500 Sobic007G139500--Sobic003G179500 Sobic001G103000 Sobic001G103000 Sobic007G139500--Sobic001G103000 Sobic003G017500 Sobic003G017500 Sobic007G139500--Sobic003G017500 Sobic002G191000 Sobic002G191000 Sobic007G139500--Sobic002G191000 Sobic009G214100 Sobic009G214100 Sobic007G139500--Sobic009G214100 Sobic003G401800--Sobic007G000700 Sobic003G401800--Sobic003G226700 Sobic003G401800--Sobic003G078300 Sobic010G211800 Sobic010G211800 Sobic003G401800--Sobic010G211800 Sobic003G401800--Sobic002G320600 Sobic009G128800 Sobic009G128800 Sobic003G401800--Sobic009G128800 Sobic003G401800--Sobic001G437500 Sobic001G425700 Sobic001G425700 Sobic003G401800--Sobic001G425700 Sobic010G165900 Sobic010G165900 Sobic003G401800--Sobic010G165900 Sobic002G276600--Sobic009G061000 Sobic002G276600--Sobic001G437500 Sobic001G099100 Sobic001G099100 Sobic002G276600--Sobic001G099100 Sobic002G276600--Sobic008G174900 Sobic002G276600--Sobic006G267500 Sobic002G276600--Sobic004G243800 Sobic002G276600--Sobic009G026101 Sobic004G051300 Sobic004G051300 Sobic002G276600--Sobic004G051300 Sobic010G090500 Sobic010G090500 Sobic002G276600--Sobic010G090500
Octagon: transcription factors


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