Gene annotation
Transcriptome id Sobic.010G228100.1
Synonym PLAIIB, Sb10g027150, PLP6
Functional annotation "DEP3(Ortholog in rice:Qiao et al., 2011)" (PubMedID : 31659937)
PLA IIIA/PLP7, putative, expressed
UniProt C5Z7T7
Pfam PF01734
Panther DB PTHR32241 PTHR32241:SF7
NCBI CDD KOG0513; Ca2+-independent phospholipase A2
KEGG Orthology -
Gene Ontology GO:0006629; lipid metabolic process


Orthologs (automatic annotation)
TAIR AT3G54950 : patatin-like protein 6
RAP-DB (Rice) LOC_Os06g46350.1 : PLA IIIA/PLP7, putative, expressed
MaizeGDB (Corn) Zm00025a018048
Brachypodium KQK14014 , KQK17127
Barley HORVU7Hr1G106600.2 , HORVU7Hr1G106600.3 , HORVU7Hr1G106600.1 , HORVU7Hr1G106600.6 , HORVU7Hr1G106600.4 , HORVU7Hr1G106600.5
Wheat TraesCS7D02G452000 , TraesCS7B02G364900 , TraesCS7A02G464400
Populus -


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cDNA sequences
Sobic.010G228100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G334900 X8 domain containing protein, expressed -
2 Sobic.003G006100 Leucine Rich Repeat family protein, expressed -
3 Sobic.001G037400 expressed protein -
4 Sobic.009G232200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fasciclin domain containing protein, expressed -
5 Sobic.004G243800 HEAT repeat family protein, putative, expressed -
6 Sobic.009G033400 peroxidase precursor, putative, expressed K00430: peroxidase
7 Sobic.004G168700 harpin-induced protein 1 domain containing protein, expressed -
8 Sobic.003G031400 harpin-induced protein 1 domain containing protein, expressed -
9 Sobic.010G096100 ras-related protein, putative, expressed K04392: Ras-related C3 botulinum toxin substrate 1
10 Sobic.001G012200 similar to Cytochrome P450 71E1(PubMedID : 24655390)@4-hydroxyphenylacetaldehyde oxime monooxygenase(PubMedID : 27964718)@cytochrome P450, putative, expressed K13029: 4-hydroxyphenylacetaldehyde oxime monooxygenase
11 Sobic.001G345900 zinc finger, C3HC4 type domain containing protein, expressed -
12 Sobic.006G096500 glutamate decarboxylase, putative, expressed K01580: E4.1.1.15, gadB, gadA, glutamate decarboxylase
13 Sobic.006G075000 Late embryogenesis abundant hydroxyproline-rich glycoprotein("PubMedID : 26759170,PubMedID : 24597475")@harpin-induced protein 1 domain containing protein, expressed -
14 Sobic.007G050600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CSLF6 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
15 Sobic.002G314800 monocopper oxidase, putative, expressed -
16 Sobic.009G211800 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
17 Sobic.006G081000 protein kinase domain containing protein, expressed K04730: interleukin-1 receptor-associated kinase 1
18 Sobic.001G196000 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
19 Sobic.009G251100 TTL1, putative, expressed K09527: DnaJ homolog subfamily C member 7
20 Sobic.004G150800 expressed protein -


Gene co-expression network
sample Sobic010G228100 Sobic010G228100 Sobic001G334900 Sobic001G334900 Sobic010G228100--Sobic001G334900 Sobic003G006100 Sobic003G006100 Sobic010G228100--Sobic003G006100 Sobic001G037400 Sobic001G037400 Sobic010G228100--Sobic001G037400 Sobic009G232200 Sobic009G232200 Sobic010G228100--Sobic009G232200 Sobic004G243800 Sobic004G243800 Sobic010G228100--Sobic004G243800 Sobic009G033400 Sobic009G033400 Sobic010G228100--Sobic009G033400 Sobic004G168700 Sobic004G168700 Sobic010G228100--Sobic004G168700 Sobic003G031400 Sobic003G031400 Sobic010G228100--Sobic003G031400 Sobic010G096100 Sobic010G096100 Sobic010G228100--Sobic010G096100 Sobic001G334900--Sobic009G232200 Sobic001G012600 Sobic001G012600 Sobic001G334900--Sobic001G012600 Sobic001G334900--Sobic010G228100 Sobic001G208600 Sobic001G208600 Sobic001G334900--Sobic001G208600 Sobic001G334900--Sobic009G033400 Sobic002G347300 Sobic002G347300 Sobic001G334900--Sobic002G347300 Sobic007G050600 Sobic007G050600 Sobic001G334900--Sobic007G050600 Sobic001G012200 Sobic001G012200 Sobic001G334900--Sobic001G012200 Sobic009G063400 Sobic009G063400 Sobic001G334900--Sobic009G063400 Sobic010G119900 Sobic010G119900 Sobic003G006100--Sobic010G119900 Sobic003G419600 Sobic003G419600 Sobic003G006100--Sobic003G419600 Sobic001G140800 Sobic001G140800 Sobic003G006100--Sobic001G140800 Sobic004G150800 Sobic004G150800 Sobic003G006100--Sobic004G150800 Sobic010G124200 Sobic010G124200 Sobic003G006100--Sobic010G124200 Sobic007G090424 Sobic007G090424 Sobic003G006100--Sobic007G090424 Sobic006G096500 Sobic006G096500 Sobic003G006100--Sobic006G096500 Sobic003G006100--Sobic010G228100 Sobic003G006100--Sobic001G037400 Sobic001G037400--Sobic004G243800 Sobic008G039800 Sobic008G039800 Sobic001G037400--Sobic008G039800 Sobic003G277200 Sobic003G277200 Sobic001G037400--Sobic003G277200 Sobic001G037400--Sobic003G419600 Sobic005G110600 Sobic005G110600 Sobic001G037400--Sobic005G110600 Sobic004G288500 Sobic004G288500 Sobic001G037400--Sobic004G288500 Sobic001G196000 Sobic001G196000 Sobic001G037400--Sobic001G196000 Sobic001G037400--Sobic003G006100 Sobic009G211800 Sobic009G211800 Sobic001G037400--Sobic009G211800 Sobic009G232200--Sobic001G334900 Sobic009G232200--Sobic002G347300 Sobic002G338400 Sobic002G338400 Sobic009G232200--Sobic002G338400 Sobic006G278100 Sobic006G278100 Sobic009G232200--Sobic006G278100 Sobic006G075000 Sobic006G075000 Sobic009G232200--Sobic006G075000 Sobic009G232200--Sobic004G168700 Sobic002G072200 Sobic002G072200 Sobic009G232200--Sobic002G072200 Sobic009G032600 Sobic009G032600 Sobic009G232200--Sobic009G032600 Sobic002G252000 Sobic002G252000 Sobic009G232200--Sobic002G252000 Sobic001G437500 Sobic001G437500 Sobic004G243800--Sobic001G437500 Sobic004G243800--Sobic001G037400 Sobic004G243800--Sobic001G196000 Sobic010G165100 Sobic010G165100 Sobic004G243800--Sobic010G165100 Sobic002G276600 Sobic002G276600 Sobic004G243800--Sobic002G276600 Sobic004G243800--Sobic009G211800 Sobic008G174900 Sobic008G174900 Sobic004G243800--Sobic008G174900 Sobic002G045200 Sobic002G045200 Sobic004G243800--Sobic002G045200 Sobic002G142500 Sobic002G142500 Sobic004G243800--Sobic002G142500 Sobic009G033400--Sobic001G334900 Sobic003G443200 Sobic003G443200 Sobic009G033400--Sobic003G443200 Sobic009G253300 Sobic009G253300 Sobic009G033400--Sobic009G253300 Sobic009G033400--Sobic010G228100 Sobic001G345900 Sobic001G345900 Sobic009G033400--Sobic001G345900 Sobic009G033400--Sobic001G012200 Sobic009G033400--Sobic002G347300 Sobic001G012400 Sobic001G012400 Sobic009G033400--Sobic001G012400 Sobic001G012300 Sobic001G012300 Sobic009G033400--Sobic001G012300 Sobic010G086800 Sobic010G086800 Sobic004G168700--Sobic010G086800 Sobic004G168700--Sobic009G032600 Sobic004G168700--Sobic009G232200 Sobic008G082400 Sobic008G082400 Sobic004G168700--Sobic008G082400 Sobic004G168700--Sobic009G211800 Sobic004G168700--Sobic002G072200 Sobic004G168700--Sobic004G243800 Sobic009G226900 Sobic009G226900 Sobic004G168700--Sobic009G226900 Sobic003G108000 Sobic003G108000 Sobic004G168700--Sobic003G108000 Sobic003G031400--Sobic001G037400 Sobic004G007800 Sobic004G007800 Sobic003G031400--Sobic004G007800 Sobic003G031400--Sobic010G228100 Sobic001G451800 Sobic001G451800 Sobic003G031400--Sobic001G451800 Sobic003G031400--Sobic004G243800 Sobic007G091900 Sobic007G091900 Sobic003G031400--Sobic007G091900 Sobic008G140800 Sobic008G140800 Sobic003G031400--Sobic008G140800 Sobic003G031400--Sobic004G288500 Sobic007G113900 Sobic007G113900 Sobic003G031400--Sobic007G113900 Sobic010G096100--Sobic006G075000 Sobic010G096100--Sobic001G208600 Sobic010G096100--Sobic009G063400 Sobic009G026101 Sobic009G026101 Sobic010G096100--Sobic009G026101 Sobic009G125900 Sobic009G125900 Sobic010G096100--Sobic009G125900 Sobic009G017500 Sobic009G017500 Sobic010G096100--Sobic009G017500 Sobic009G251100 Sobic009G251100 Sobic010G096100--Sobic009G251100 Sobic001G484000 Sobic001G484000 Sobic010G096100--Sobic001G484000 Sobic010G114000 Sobic010G114000 Sobic010G096100--Sobic010G114000
Octagon: transcription factors


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