Gene annotation
Transcriptome id Sobic.003G031400.1
Synonym Sb03g002930
Functional annotation harpin-induced protein 1 domain containing protein, expressed
UniProt C5XLW0
Pfam PF03168
Panther DB PTHR31234 PTHR31234:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G11890 : -
RAP-DB (Rice) LOC_Os01g09880.1 : harpin-induced protein 1 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a023010 , Zm00025a035828
Brachypodium KQK03159 , KQK07106
Barley HORVU3Hr1G019070.2 , HORVU3Hr1G019070.1
Wheat -
Populus -


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cDNA sequences
Sobic.003G031400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G037400 expressed protein -
2 Sobic.004G007800 protein kinase, putative, expressed -
3 Sobic.010G228100 "DEP3(Ortholog in rice:Qiao et al., 2011)"(PubMedID : 31659937)@PLA IIIA/PLP7, putative, expressed -
4 Sobic.001G451800 atypical receptor-like kinase MARK, putative, expressed -
5 Sobic.004G243800 HEAT repeat family protein, putative, expressed -
6 Sobic.007G091900 ATP binding protein, putative, expressed -
7 Sobic.008G140800 expressed protein -
8 Sobic.004G288500 cytochrome P450, putative, expressed K15398: fatty acid omega-hydroxylase
9 Sobic.007G113900 reticulon domain containing protein, putative, expressed -
10 Sobic.006G075000 Late embryogenesis abundant hydroxyproline-rich glycoprotein("PubMedID : 26759170,PubMedID : 24597475")@harpin-induced protein 1 domain containing protein, expressed -
11 Sobic.010G096100 ras-related protein, putative, expressed K04392: Ras-related C3 botulinum toxin substrate 1
12 Sobic.009G226900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin-responsive protein, putative, expressed -
13 Sobic.001G253900 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
14 Sobic.001G334900 X8 domain containing protein, expressed -
15 Sobic.006G166900 transferase family protein, putative, expressed -
16 Sobic.004G168700 harpin-induced protein 1 domain containing protein, expressed -
17 Sobic.009G032600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.002G003200 peroxidase precursor, putative, expressed K00430: peroxidase
19 Sobic.003G136600 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
20 Sobic.009G063400 "CESA1-like or CESA10-like homologous to the Arabidopsis, up-regulated in addition of GA3"(PubMedID : 26198258)@CESA1 - cellulose synthase, expressed K10999: cellulose synthase A


Gene co-expression network
sample Sobic003G031400 Sobic003G031400 Sobic001G037400 Sobic001G037400 Sobic003G031400--Sobic001G037400 Sobic004G007800 Sobic004G007800 Sobic003G031400--Sobic004G007800 Sobic010G228100 Sobic010G228100 Sobic003G031400--Sobic010G228100 Sobic001G451800 Sobic001G451800 Sobic003G031400--Sobic001G451800 Sobic004G243800 Sobic004G243800 Sobic003G031400--Sobic004G243800 Sobic007G091900 Sobic007G091900 Sobic003G031400--Sobic007G091900 Sobic008G140800 Sobic008G140800 Sobic003G031400--Sobic008G140800 Sobic004G288500 Sobic004G288500 Sobic003G031400--Sobic004G288500 Sobic007G113900 Sobic007G113900 Sobic003G031400--Sobic007G113900 Sobic001G037400--Sobic004G243800 Sobic008G039800 Sobic008G039800 Sobic001G037400--Sobic008G039800 Sobic003G277200 Sobic003G277200 Sobic001G037400--Sobic003G277200 Sobic003G419600 Sobic003G419600 Sobic001G037400--Sobic003G419600 Sobic005G110600 Sobic005G110600 Sobic001G037400--Sobic005G110600 Sobic001G037400--Sobic004G288500 Sobic001G196000 Sobic001G196000 Sobic001G037400--Sobic001G196000 Sobic003G006100 Sobic003G006100 Sobic001G037400--Sobic003G006100 Sobic009G211800 Sobic009G211800 Sobic001G037400--Sobic009G211800 Sobic004G007800--Sobic003G031400 Sobic008G083300 Sobic008G083300 Sobic004G007800--Sobic008G083300 Sobic006G009900 Sobic006G009900 Sobic004G007800--Sobic006G009900 Sobic008G183500 Sobic008G183500 Sobic004G007800--Sobic008G183500 Sobic004G007800--Sobic007G091900 Sobic004G007800--Sobic008G140800 Sobic001G253900 Sobic001G253900 Sobic004G007800--Sobic001G253900 Sobic001G189500 Sobic001G189500 Sobic004G007800--Sobic001G189500 Sobic002G005200 Sobic002G005200 Sobic004G007800--Sobic002G005200 Sobic001G334900 Sobic001G334900 Sobic010G228100--Sobic001G334900 Sobic010G228100--Sobic003G006100 Sobic010G228100--Sobic001G037400 Sobic009G232200 Sobic009G232200 Sobic010G228100--Sobic009G232200 Sobic010G228100--Sobic004G243800 Sobic009G033400 Sobic009G033400 Sobic010G228100--Sobic009G033400 Sobic004G168700 Sobic004G168700 Sobic010G228100--Sobic004G168700 Sobic010G228100--Sobic003G031400 Sobic010G096100 Sobic010G096100 Sobic010G228100--Sobic010G096100 Sobic001G451800--Sobic001G253900 Sobic003G400600 Sobic003G400600 Sobic001G451800--Sobic003G400600 Sobic001G451800--Sobic007G113900 Sobic003G420100 Sobic003G420100 Sobic001G451800--Sobic003G420100 Sobic008G156900 Sobic008G156900 Sobic001G451800--Sobic008G156900 Sobic001G451800--Sobic003G277200 Sobic010G104400 Sobic010G104400 Sobic001G451800--Sobic010G104400 Sobic006G214000 Sobic006G214000 Sobic001G451800--Sobic006G214000 Sobic010G181500 Sobic010G181500 Sobic001G451800--Sobic010G181500 Sobic001G437500 Sobic001G437500 Sobic004G243800--Sobic001G437500 Sobic004G243800--Sobic001G037400 Sobic004G243800--Sobic001G196000 Sobic010G165100 Sobic010G165100 Sobic004G243800--Sobic010G165100 Sobic002G276600 Sobic002G276600 Sobic004G243800--Sobic002G276600 Sobic004G243800--Sobic009G211800 Sobic008G174900 Sobic008G174900 Sobic004G243800--Sobic008G174900 Sobic002G045200 Sobic002G045200 Sobic004G243800--Sobic002G045200 Sobic002G142500 Sobic002G142500 Sobic004G243800--Sobic002G142500 Sobic001G302300 Sobic001G302300 Sobic007G091900--Sobic001G302300 Sobic003G270400 Sobic003G270400 Sobic007G091900--Sobic003G270400 Sobic007G119500 Sobic007G119500 Sobic007G091900--Sobic007G119500 Sobic003G366300 Sobic003G366300 Sobic007G091900--Sobic003G366300 Sobic001G406700 Sobic001G406700 Sobic007G091900--Sobic001G406700 Sobic004G047600 Sobic004G047600 Sobic007G091900--Sobic004G047600 Sobic003G387500 Sobic003G387500 Sobic007G091900--Sobic003G387500 Sobic004G319600 Sobic004G319600 Sobic007G091900--Sobic004G319600 Sobic003G378800 Sobic003G378800 Sobic007G091900--Sobic003G378800 Sobic007G039100 Sobic007G039100 Sobic008G140800--Sobic007G039100 Sobic008G140800--Sobic007G091900 Sobic009G226900 Sobic009G226900 Sobic008G140800--Sobic009G226900 Sobic009G153800 Sobic009G153800 Sobic008G140800--Sobic009G153800 Sobic008G140800--Sobic002G005200 Sobic008G140800--Sobic003G031400 Sobic008G059800 Sobic008G059800 Sobic008G140800--Sobic008G059800 Sobic008G140800--Sobic004G007800 Sobic003G062000 Sobic003G062000 Sobic008G140800--Sobic003G062000 Sobic004G288500--Sobic001G037400 Sobic009G134000 Sobic009G134000 Sobic004G288500--Sobic009G134000 Sobic004G288500--Sobic005G110600 Sobic004G288500--Sobic001G253900 Sobic004G288500--Sobic001G451800 Sobic004G288500--Sobic003G277200 Sobic004G288500--Sobic003G419600 Sobic001G140800 Sobic001G140800 Sobic004G288500--Sobic001G140800 Sobic005G130700 Sobic005G130700 Sobic004G288500--Sobic005G130700 Sobic007G113900--Sobic001G253900 Sobic007G113900--Sobic001G451800 Sobic007G113900--Sobic008G156900 Sobic010G234900 Sobic010G234900 Sobic007G113900--Sobic010G234900 Sobic002G202500 Sobic002G202500 Sobic007G113900--Sobic002G202500 Sobic007G162000 Sobic007G162000 Sobic007G113900--Sobic007G162000 Sobic006G178800 Sobic006G178800 Sobic007G113900--Sobic006G178800 Sobic001G331100 Sobic001G331100 Sobic007G113900--Sobic001G331100 Sobic007G113900--Sobic009G134000
Octagon: transcription factors


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