Gene annotation
Transcriptome id Sobic.001G451800.1
Synonym Sb01g042480
Functional annotation atypical receptor-like kinase MARK, putative, expressed
UniProt C5WSN2
Pfam PF08263 PF00069
Panther DB PTHR27008 PTHR27008:SF8
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G48480 : receptor-like kinase 1
RAP-DB (Rice) LOC_Os03g12250.1 : atypical receptor-like kinase MARK, putative, expressed
MaizeGDB (Corn) Zm00025a028679 , Zm00025a049174 , Zm00025a022856 , Zm00025a046806 , Zm00025a053035 , Zm00025a053037 , Zm00025a038475 , Zm00025a044784 , Zm00025a035948
Brachypodium KQK08665 , KQJ81841 , KQJ81840 , KQK22829 , PNT60695 , PNT60696
Barley HORVU5Hr1G007340.1 , HORVU3Hr1G035530.1 , HORVU3Hr1G053300.2 , HORVU3Hr1G053300.3 , HORVU3Hr1G053300.1 , HORVU4Hr1G066900.3 , HORVU4Hr1G066900.2 , HORVU4Hr1G066900.1 , HORVU0Hr1G011420.1 , HORVU5Hr1G007340.5 , HORVU5Hr1G007340.4 , HORVU5Hr1G007340.7 , HORVU5Hr1G007340.3 , HORVU5Hr1G007340.2 , HORVU5Hr1G007340.9 , HORVU5Hr1G007340.8 , HORVU5Hr1G059170.1 , HORVU5Hr1G007340.11 , HORVU5Hr1G007340.10
Wheat TraesCS4D02G173400 , TraesCS4A02G133400 , TraesCS5B02G197100 , TraesCS7B02G121600 , TraesCS7D02G216400 , TraesCS4D02G241100 , TraesCS5A02G198400 , TraesCS3A02G217800 , TraesCS4B02G241500 , TraesCS3B02G248200 , TraesCS4A02G064200 , TraesCS3D02G234500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G253900 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
2 Sobic.003G400600 BHLH transcription factor, putative, expressed -
3 Sobic.007G113900 reticulon domain containing protein, putative, expressed -
4 Sobic.003G420100 RNA recognition motif containing protein, putative, expressed K13207: CUGBP, BRUNOL, CUG-BP- and ETR3-like factor
5 Sobic.008G156900 similar to Auxin-responsive protein IAA30(PubMedID : 29862293)@"domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf"(PubMedID : 20499123)@OsIAA30 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
6 Sobic.003G277200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
7 Sobic.010G104400 cysteine-rich repeat secretory protein precursor, putative, expressed -
8 Sobic.006G214000 expressed protein K00558: DNMT1, DNA (cytosine-5)-methyltransferase 1
9 Sobic.010G181500 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
10 Sobic.010G216600 expressed protein -
11 Sobic.009G078900 GDSL-like lipase/acylhydrolase, putative, expressed -
12 Sobic.004G077100 Mad3/BUB1 homology region 1 domain containing protein, expressed K02178: checkpoint serine/threonine-protein kinase
13 Sobic.004G288500 cytochrome P450, putative, expressed K15398: fatty acid omega-hydroxylase
14 Sobic.001G285200 protein transport protein-related, putative, expressed -
15 Sobic.005G110600 glycosyl hydrolase, putative, expressed K01183: chitinase
16 Sobic.003G399400 expressed protein -
17 Sobic.003G300100 bZIP transcription factor domain containing protein, expressed -
18 Sobic.001G409700 RNA recognition motif containing protein, putative, expressed -
19 Sobic.009G242501 - -
20 Sobic.001G037400 expressed protein -


Gene co-expression network
sample Sobic001G451800 Sobic001G451800 Sobic001G253900 Sobic001G253900 Sobic001G451800--Sobic001G253900 Sobic003G400600 Sobic003G400600 Sobic001G451800--Sobic003G400600 Sobic007G113900 Sobic007G113900 Sobic001G451800--Sobic007G113900 Sobic003G420100 Sobic003G420100 Sobic001G451800--Sobic003G420100 Sobic008G156900 Sobic008G156900 Sobic001G451800--Sobic008G156900 Sobic003G277200 Sobic003G277200 Sobic001G451800--Sobic003G277200 Sobic010G104400 Sobic010G104400 Sobic001G451800--Sobic010G104400 Sobic006G214000 Sobic006G214000 Sobic001G451800--Sobic006G214000 Sobic010G181500 Sobic010G181500 Sobic001G451800--Sobic010G181500 Sobic001G253900--Sobic001G451800 Sobic007G162000 Sobic007G162000 Sobic001G253900--Sobic007G162000 Sobic001G253900--Sobic007G113900 Sobic001G253900--Sobic008G156900 Sobic003G300100 Sobic003G300100 Sobic001G253900--Sobic003G300100 Sobic004G288500 Sobic004G288500 Sobic001G253900--Sobic004G288500 Sobic009G134000 Sobic009G134000 Sobic001G253900--Sobic009G134000 Sobic002G202500 Sobic002G202500 Sobic001G253900--Sobic002G202500 Sobic008G083300 Sobic008G083300 Sobic001G253900--Sobic008G083300 Sobic003G400600--Sobic001G451800 Sobic003G400600--Sobic003G277200 Sobic001G437500 Sobic001G437500 Sobic003G400600--Sobic001G437500 Sobic008G039800 Sobic008G039800 Sobic003G400600--Sobic008G039800 Sobic002G142500 Sobic002G142500 Sobic003G400600--Sobic002G142500 Sobic002G276600 Sobic002G276600 Sobic003G400600--Sobic002G276600 Sobic003G017500 Sobic003G017500 Sobic003G400600--Sobic003G017500 Sobic002G246000 Sobic002G246000 Sobic003G400600--Sobic002G246000 Sobic002G045200 Sobic002G045200 Sobic003G400600--Sobic002G045200 Sobic007G113900--Sobic001G253900 Sobic007G113900--Sobic001G451800 Sobic007G113900--Sobic008G156900 Sobic010G234900 Sobic010G234900 Sobic007G113900--Sobic010G234900 Sobic007G113900--Sobic002G202500 Sobic007G113900--Sobic007G162000 Sobic006G178800 Sobic006G178800 Sobic007G113900--Sobic006G178800 Sobic001G331100 Sobic001G331100 Sobic007G113900--Sobic001G331100 Sobic007G113900--Sobic009G134000 Sobic003G247600 Sobic003G247600 Sobic003G420100--Sobic003G247600 Sobic004G233700 Sobic004G233700 Sobic003G420100--Sobic004G233700 Sobic009G242501 Sobic009G242501 Sobic003G420100--Sobic009G242501 Sobic007G208100 Sobic007G208100 Sobic003G420100--Sobic007G208100 Sobic004G286700 Sobic004G286700 Sobic003G420100--Sobic004G286700 Sobic005G047100 Sobic005G047100 Sobic003G420100--Sobic005G047100 Sobic008G141200 Sobic008G141200 Sobic003G420100--Sobic008G141200 Sobic004G066900 Sobic004G066900 Sobic003G420100--Sobic004G066900 Sobic003G135400 Sobic003G135400 Sobic003G420100--Sobic003G135400 Sobic008G156900--Sobic003G300100 Sobic008G156900--Sobic001G451800 Sobic008G156900--Sobic007G113900 Sobic008G156900--Sobic001G253900 Sobic001G397700 Sobic001G397700 Sobic008G156900--Sobic001G397700 Sobic002G279300 Sobic002G279300 Sobic008G156900--Sobic002G279300 Sobic008G156900--Sobic001G331100 Sobic010G234800 Sobic010G234800 Sobic008G156900--Sobic010G234800 Sobic001G496700 Sobic001G496700 Sobic008G156900--Sobic001G496700 Sobic002G419200 Sobic002G419200 Sobic003G277200--Sobic002G419200 Sobic003G338200 Sobic003G338200 Sobic003G277200--Sobic003G338200 Sobic003G116100 Sobic003G116100 Sobic003G277200--Sobic003G116100 Sobic003G277200--Sobic008G039800 Sobic010G216600 Sobic010G216600 Sobic003G277200--Sobic010G216600 Sobic001G345200 Sobic001G345200 Sobic003G277200--Sobic001G345200 Sobic001G285200 Sobic001G285200 Sobic003G277200--Sobic001G285200 Sobic007G012800 Sobic007G012800 Sobic003G277200--Sobic007G012800 Sobic001G037400 Sobic001G037400 Sobic003G277200--Sobic001G037400 Sobic002G016400 Sobic002G016400 Sobic010G104400--Sobic002G016400 Sobic003G296500 Sobic003G296500 Sobic010G104400--Sobic003G296500 Sobic006G149300 Sobic006G149300 Sobic010G104400--Sobic006G149300 Sobic010G104400--Sobic007G208100 Sobic001G177900 Sobic001G177900 Sobic010G104400--Sobic001G177900 Sobic002G020500 Sobic002G020500 Sobic010G104400--Sobic002G020500 Sobic010G104400--Sobic004G233700 Sobic001G403200 Sobic001G403200 Sobic010G104400--Sobic001G403200 Sobic004G287700 Sobic004G287700 Sobic010G104400--Sobic004G287700 Sobic006G214000--Sobic001G177900 Sobic006G029300 Sobic006G029300 Sobic006G214000--Sobic006G029300 Sobic010G147700 Sobic010G147700 Sobic006G214000--Sobic010G147700 Sobic007G168900 Sobic007G168900 Sobic006G214000--Sobic007G168900 Sobic001G540900 Sobic001G540900 Sobic006G214000--Sobic001G540900 Sobic001G075400 Sobic001G075400 Sobic006G214000--Sobic001G075400 Sobic003G294500 Sobic003G294500 Sobic006G214000--Sobic003G294500 Sobic003G387600 Sobic003G387600 Sobic006G214000--Sobic003G387600 Sobic003G314900 Sobic003G314900 Sobic006G214000--Sobic003G314900 Sobic003G419700 Sobic003G419700 Sobic010G181500--Sobic003G419700 Sobic010G010900 Sobic010G010900 Sobic010G181500--Sobic010G010900 Sobic001G074000 Sobic001G074000 Sobic010G181500--Sobic001G074000 Sobic001G522300 Sobic001G522300 Sobic010G181500--Sobic001G522300 Sobic001G083500 Sobic001G083500 Sobic010G181500--Sobic001G083500 Sobic010G111200 Sobic010G111200 Sobic010G181500--Sobic010G111200 Sobic010G181500--Sobic003G338200 Sobic005G104100 Sobic005G104100 Sobic010G181500--Sobic005G104100 Sobic003G360700 Sobic003G360700 Sobic010G181500--Sobic003G360700
Octagon: transcription factors


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