Gene annotation
Transcriptome id Sobic.001G253900.1
Synonym ATHB13, Sb01g022420
Functional annotation homeobox associated leucine zipper, putative, expressed
UniProt C5WM88
Pfam PF02183 PF00046
Panther DB PTHR24326 PTHR24326:SF225
NCBI CDD KOG0483; Transcription factor HEX, contains HOX and HALZ domains
KEGG Orthology K09338; homeobox-leucine zipper protein
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT1G69780 : Homeobox-leucine zipper protein family
RAP-DB (Rice) LOC_Os10g26500.1 : homeobox associated leucine zipper, putative, expressed
MaizeGDB (Corn) Zm00025a000859 , Zm00025a017816 , Zm00025a053332 , Zm00025a007007
Brachypodium KQJ98719 , KQK23405
Barley HORVU4Hr1G075180.3 , HORVU4Hr1G075180.2 , HORVU4Hr1G075180.1 , HORVU4Hr1G075180.7 , HORVU4Hr1G075180.6 , HORVU4Hr1G075180.5 , HORVU4Hr1G075180.4
Wheat TraesCS4A02G016600 , TraesCS4B02G287600 , TraesCS4D02G286400 , TraesCS4D02G286400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G451800 atypical receptor-like kinase MARK, putative, expressed -
2 Sobic.007G162000 carboxyl-terminal peptidase, putative, expressed -
3 Sobic.007G113900 reticulon domain containing protein, putative, expressed -
4 Sobic.008G156900 similar to Auxin-responsive protein IAA30(PubMedID : 29862293)@"domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf"(PubMedID : 20499123)@OsIAA30 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
5 Sobic.003G300100 bZIP transcription factor domain containing protein, expressed -
6 Sobic.004G288500 cytochrome P450, putative, expressed K15398: fatty acid omega-hydroxylase
7 Sobic.009G134000 receptor-like protein kinase precursor, putative, expressed -
8 Sobic.002G202500 spotted leaf 11, putative, expressed -
9 Sobic.008G083300 expressed protein -
10 Sobic.001G331100 expressed protein -
11 Sobic.010G143300 carboxyl-terminal peptidase, putative, expressed -
12 Sobic.003G031400 harpin-induced protein 1 domain containing protein, expressed -
13 Sobic.004G007800 protein kinase, putative, expressed -
14 Sobic.001G534300 Trihelix Family(PubMedID : 24864043)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@AT-GTL1, putative, expressed -
15 Sobic.010G181500 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
16 Sobic.009G195600 ras-related protein, putative, expressed K04392: Ras-related C3 botulinum toxin substrate 1
17 Sobic.006G178800 DUF630/DUF632 domains containing protein, putative, expressed -
18 Sobic.003G047200 expressed protein -
19 Sobic.009G254400 polygalacturonase inhibitor 1 precursor, putative, expressed -
20 Sobic.010G234900 armadillo/beta-catenin repeat family protein, putative, expressed -


Gene co-expression network
sample Sobic001G253900 Sobic001G253900 Sobic001G451800 Sobic001G451800 Sobic001G253900--Sobic001G451800 Sobic007G162000 Sobic007G162000 Sobic001G253900--Sobic007G162000 Sobic007G113900 Sobic007G113900 Sobic001G253900--Sobic007G113900 Sobic008G156900 Sobic008G156900 Sobic001G253900--Sobic008G156900 Sobic003G300100 Sobic003G300100 Sobic001G253900--Sobic003G300100 Sobic004G288500 Sobic004G288500 Sobic001G253900--Sobic004G288500 Sobic009G134000 Sobic009G134000 Sobic001G253900--Sobic009G134000 Sobic002G202500 Sobic002G202500 Sobic001G253900--Sobic002G202500 Sobic008G083300 Sobic008G083300 Sobic001G253900--Sobic008G083300 Sobic001G451800--Sobic001G253900 Sobic003G400600 Sobic003G400600 Sobic001G451800--Sobic003G400600 Sobic001G451800--Sobic007G113900 Sobic003G420100 Sobic003G420100 Sobic001G451800--Sobic003G420100 Sobic001G451800--Sobic008G156900 Sobic003G277200 Sobic003G277200 Sobic001G451800--Sobic003G277200 Sobic010G104400 Sobic010G104400 Sobic001G451800--Sobic010G104400 Sobic006G214000 Sobic006G214000 Sobic001G451800--Sobic006G214000 Sobic010G181500 Sobic010G181500 Sobic001G451800--Sobic010G181500 Sobic007G162000--Sobic002G202500 Sobic009G195600 Sobic009G195600 Sobic007G162000--Sobic009G195600 Sobic007G019600 Sobic007G019600 Sobic007G162000--Sobic007G019600 Sobic003G047200 Sobic003G047200 Sobic007G162000--Sobic003G047200 Sobic001G331100 Sobic001G331100 Sobic007G162000--Sobic001G331100 Sobic002G035500 Sobic002G035500 Sobic007G162000--Sobic002G035500 Sobic007G162000--Sobic001G253900 Sobic006G155900 Sobic006G155900 Sobic007G162000--Sobic006G155900 Sobic003G432000 Sobic003G432000 Sobic007G162000--Sobic003G432000 Sobic007G113900--Sobic001G253900 Sobic007G113900--Sobic001G451800 Sobic007G113900--Sobic008G156900 Sobic010G234900 Sobic010G234900 Sobic007G113900--Sobic010G234900 Sobic007G113900--Sobic002G202500 Sobic007G113900--Sobic007G162000 Sobic006G178800 Sobic006G178800 Sobic007G113900--Sobic006G178800 Sobic007G113900--Sobic001G331100 Sobic007G113900--Sobic009G134000 Sobic008G156900--Sobic003G300100 Sobic008G156900--Sobic001G451800 Sobic008G156900--Sobic007G113900 Sobic008G156900--Sobic001G253900 Sobic001G397700 Sobic001G397700 Sobic008G156900--Sobic001G397700 Sobic002G279300 Sobic002G279300 Sobic008G156900--Sobic002G279300 Sobic008G156900--Sobic001G331100 Sobic010G234800 Sobic010G234800 Sobic008G156900--Sobic010G234800 Sobic001G496700 Sobic001G496700 Sobic008G156900--Sobic001G496700 Sobic003G300100--Sobic002G279300 Sobic003G300100--Sobic008G156900 Sobic003G300100--Sobic001G397700 Sobic004G115600 Sobic004G115600 Sobic003G300100--Sobic004G115600 Sobic003G300100--Sobic001G331100 Sobic003G300100--Sobic001G253900 Sobic001G458900 Sobic001G458900 Sobic003G300100--Sobic001G458900 Sobic003G300100--Sobic008G083300 Sobic003G300100--Sobic001G451800 Sobic001G037400 Sobic001G037400 Sobic004G288500--Sobic001G037400 Sobic004G288500--Sobic009G134000 Sobic005G110600 Sobic005G110600 Sobic004G288500--Sobic005G110600 Sobic004G288500--Sobic001G253900 Sobic004G288500--Sobic001G451800 Sobic004G288500--Sobic003G277200 Sobic003G419600 Sobic003G419600 Sobic004G288500--Sobic003G419600 Sobic001G140800 Sobic001G140800 Sobic004G288500--Sobic001G140800 Sobic005G130700 Sobic005G130700 Sobic004G288500--Sobic005G130700 Sobic007G012800 Sobic007G012800 Sobic009G134000--Sobic007G012800 Sobic010G143300 Sobic010G143300 Sobic009G134000--Sobic010G143300 Sobic009G154100 Sobic009G154100 Sobic009G134000--Sobic009G154100 Sobic009G134000--Sobic003G277200 Sobic009G134000--Sobic006G178800 Sobic010G107200 Sobic010G107200 Sobic009G134000--Sobic010G107200 Sobic001G389600 Sobic001G389600 Sobic009G134000--Sobic001G389600 Sobic001G478100 Sobic001G478100 Sobic009G134000--Sobic001G478100 Sobic009G134000--Sobic005G130700 Sobic002G202500--Sobic007G162000 Sobic004G336700 Sobic004G336700 Sobic002G202500--Sobic004G336700 Sobic001G247700 Sobic001G247700 Sobic002G202500--Sobic001G247700 Sobic002G202500--Sobic009G195600 Sobic001G265300 Sobic001G265300 Sobic002G202500--Sobic001G265300 Sobic004G113900 Sobic004G113900 Sobic002G202500--Sobic004G113900 Sobic002G202500--Sobic007G019600 Sobic010G209800 Sobic010G209800 Sobic002G202500--Sobic010G209800 Sobic004G283800 Sobic004G283800 Sobic002G202500--Sobic004G283800 Sobic006G009900 Sobic006G009900 Sobic008G083300--Sobic006G009900 Sobic009G206800 Sobic009G206800 Sobic008G083300--Sobic009G206800 Sobic008G083300--Sobic003G300100 Sobic008G083300--Sobic002G279300 Sobic004G007800 Sobic004G007800 Sobic008G083300--Sobic004G007800 Sobic001G008400 Sobic001G008400 Sobic008G083300--Sobic001G008400 Sobic008G083300--Sobic001G451800 Sobic008G083300--Sobic001G253900 Sobic006G003000 Sobic006G003000 Sobic008G083300--Sobic006G003000
Octagon: transcription factors


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