Gene annotation
Transcriptome id Sobic.004G007800.1
Synonym NCRK
Functional annotation protein kinase, putative, expressed
UniProt C5XS66
Pfam PF00069
Panther DB PTHR27001 PTHR27001:SF78
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G28250 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os02g02040.4 : protein kinase, putative, expressed
MaizeGDB (Corn) Zm00025a018668
Brachypodium PNT65707
Barley HORVU6Hr1G005260.19 , HORVU6Hr1G005260.18 , HORVU6Hr1G005260.13 , HORVU6Hr1G005260.12 , HORVU6Hr1G005260.11 , HORVU6Hr1G005260.10 , HORVU6Hr1G005260.17 , HORVU6Hr1G005260.16 , HORVU6Hr1G005260.15 , HORVU6Hr1G005260.14 , HORVU6Hr1G005260.22 , HORVU6Hr1G005260.23 , HORVU6Hr1G005260.20 , HORVU6Hr1G005260.21 , HORVU6Hr1G005260.24 , HORVU2Hr1G044600.2 , HORVU6Hr1G005260.9 , HORVU6Hr1G005260.8 , HORVU6Hr1G005260.3 , HORVU6Hr1G005260.2 , HORVU6Hr1G005260.1 , HORVU6Hr1G005260.7 , HORVU6Hr1G005260.6 , HORVU6Hr1G005260.5 , HORVU6Hr1G005260.4
Wheat TraesCS2D02G221400 , TraesCS6D02G031600 , TraesCS2B02G240800 , TraesCS2B02G240800 , TraesCS2B02G240800 , TraesCS2A02G215800 , TraesCS2A02G215800 , TraesCS6B02G039900
Populus -


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cDNA sequences
Sobic.004G007800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G031400 harpin-induced protein 1 domain containing protein, expressed -
2 Sobic.008G083300 expressed protein -
3 Sobic.006G009900 expressed protein -
4 Sobic.008G183500 - -
5 Sobic.007G091900 ATP binding protein, putative, expressed -
6 Sobic.008G140800 expressed protein -
7 Sobic.001G253900 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
8 Sobic.001G189500 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed -
9 Sobic.002G005200 dirigent, putative, expressed -
10 Sobic.005G122800 transferase family protein, putative, expressed K15400: omega-hydroxypalmitate O-feruloyl transferase
11 Sobic.004G288500 cytochrome P450, putative, expressed K15398: fatty acid omega-hydroxylase
12 Sobic.007G113900 reticulon domain containing protein, putative, expressed -
13 Sobic.003G443200 xylem cysteine proteinase 2 precursor, putative, expressed K16290: xylem cysteine proteinase
14 Sobic.004G153700 expressed protein -
15 Sobic.001G047900 expressed protein -
16 Sobic.001G302300 expressed protein -
17 Sobic.001G303000 zinc finger family protein, putative, expressed -
18 Sobic.009G206800 WRKY23, expressed -
19 Sobic.004G172400 Leucine Rich Repeat family protein, expressed -
20 Sobic.010G016300 BAG domain containing protein, expressed -


Gene co-expression network
sample Sobic004G007800 Sobic004G007800 Sobic003G031400 Sobic003G031400 Sobic004G007800--Sobic003G031400 Sobic008G083300 Sobic008G083300 Sobic004G007800--Sobic008G083300 Sobic006G009900 Sobic006G009900 Sobic004G007800--Sobic006G009900 Sobic008G183500 Sobic008G183500 Sobic004G007800--Sobic008G183500 Sobic007G091900 Sobic007G091900 Sobic004G007800--Sobic007G091900 Sobic008G140800 Sobic008G140800 Sobic004G007800--Sobic008G140800 Sobic001G253900 Sobic001G253900 Sobic004G007800--Sobic001G253900 Sobic001G189500 Sobic001G189500 Sobic004G007800--Sobic001G189500 Sobic002G005200 Sobic002G005200 Sobic004G007800--Sobic002G005200 Sobic001G037400 Sobic001G037400 Sobic003G031400--Sobic001G037400 Sobic003G031400--Sobic004G007800 Sobic010G228100 Sobic010G228100 Sobic003G031400--Sobic010G228100 Sobic001G451800 Sobic001G451800 Sobic003G031400--Sobic001G451800 Sobic004G243800 Sobic004G243800 Sobic003G031400--Sobic004G243800 Sobic003G031400--Sobic007G091900 Sobic003G031400--Sobic008G140800 Sobic004G288500 Sobic004G288500 Sobic003G031400--Sobic004G288500 Sobic007G113900 Sobic007G113900 Sobic003G031400--Sobic007G113900 Sobic008G083300--Sobic006G009900 Sobic009G206800 Sobic009G206800 Sobic008G083300--Sobic009G206800 Sobic003G300100 Sobic003G300100 Sobic008G083300--Sobic003G300100 Sobic002G279300 Sobic002G279300 Sobic008G083300--Sobic002G279300 Sobic008G083300--Sobic004G007800 Sobic001G008400 Sobic001G008400 Sobic008G083300--Sobic001G008400 Sobic008G083300--Sobic001G451800 Sobic008G083300--Sobic001G253900 Sobic006G003000 Sobic006G003000 Sobic008G083300--Sobic006G003000 Sobic006G009900--Sobic009G206800 Sobic006G009900--Sobic008G083300 Sobic002G005300 Sobic002G005300 Sobic006G009900--Sobic002G005300 Sobic008G178901 Sobic008G178901 Sobic006G009900--Sobic008G178901 Sobic006G009900--Sobic008G183500 Sobic006G009900--Sobic006G003000 Sobic006G009900--Sobic004G007800 Sobic006G009900--Sobic001G189500 Sobic007G052600 Sobic007G052600 Sobic006G009900--Sobic007G052600 Sobic008G183500--Sobic006G009900 Sobic008G183500--Sobic009G206800 Sobic008G183500--Sobic004G007800 Sobic008G183500--Sobic002G005300 Sobic008G183500--Sobic008G083300 Sobic005G122800 Sobic005G122800 Sobic008G183500--Sobic005G122800 Sobic003G443200 Sobic003G443200 Sobic008G183500--Sobic003G443200 Sobic008G183500--Sobic003G031400 Sobic002G050100 Sobic002G050100 Sobic008G183500--Sobic002G050100 Sobic001G302300 Sobic001G302300 Sobic007G091900--Sobic001G302300 Sobic003G270400 Sobic003G270400 Sobic007G091900--Sobic003G270400 Sobic007G119500 Sobic007G119500 Sobic007G091900--Sobic007G119500 Sobic003G366300 Sobic003G366300 Sobic007G091900--Sobic003G366300 Sobic001G406700 Sobic001G406700 Sobic007G091900--Sobic001G406700 Sobic004G047600 Sobic004G047600 Sobic007G091900--Sobic004G047600 Sobic003G387500 Sobic003G387500 Sobic007G091900--Sobic003G387500 Sobic004G319600 Sobic004G319600 Sobic007G091900--Sobic004G319600 Sobic003G378800 Sobic003G378800 Sobic007G091900--Sobic003G378800 Sobic007G039100 Sobic007G039100 Sobic008G140800--Sobic007G039100 Sobic008G140800--Sobic007G091900 Sobic009G226900 Sobic009G226900 Sobic008G140800--Sobic009G226900 Sobic009G153800 Sobic009G153800 Sobic008G140800--Sobic009G153800 Sobic008G140800--Sobic002G005200 Sobic008G140800--Sobic003G031400 Sobic008G059800 Sobic008G059800 Sobic008G140800--Sobic008G059800 Sobic008G140800--Sobic004G007800 Sobic003G062000 Sobic003G062000 Sobic008G140800--Sobic003G062000 Sobic001G253900--Sobic001G451800 Sobic007G162000 Sobic007G162000 Sobic001G253900--Sobic007G162000 Sobic001G253900--Sobic007G113900 Sobic008G156900 Sobic008G156900 Sobic001G253900--Sobic008G156900 Sobic001G253900--Sobic003G300100 Sobic001G253900--Sobic004G288500 Sobic009G134000 Sobic009G134000 Sobic001G253900--Sobic009G134000 Sobic002G202500 Sobic002G202500 Sobic001G253900--Sobic002G202500 Sobic001G253900--Sobic008G083300 Sobic001G373500 Sobic001G373500 Sobic001G189500--Sobic001G373500 Sobic002G277700 Sobic002G277700 Sobic001G189500--Sobic002G277700 Sobic005G035000 Sobic005G035000 Sobic001G189500--Sobic005G035000 Sobic001G189500--Sobic001G302300 Sobic003G226100 Sobic003G226100 Sobic001G189500--Sobic003G226100 Sobic004G153700 Sobic004G153700 Sobic001G189500--Sobic004G153700 Sobic009G204800 Sobic009G204800 Sobic001G189500--Sobic009G204800 Sobic001G189500--Sobic003G443200 Sobic010G194500 Sobic010G194500 Sobic001G189500--Sobic010G194500 Sobic009G076800 Sobic009G076800 Sobic002G005200--Sobic009G076800 Sobic001G005000 Sobic001G005000 Sobic002G005200--Sobic001G005000 Sobic002G005200--Sobic004G153700 Sobic010G008000 Sobic010G008000 Sobic002G005200--Sobic010G008000 Sobic006G257100 Sobic006G257100 Sobic002G005200--Sobic006G257100 Sobic002G005200--Sobic007G039100 Sobic002G005200--Sobic001G302300 Sobic002G005200--Sobic008G140800 Sobic002G005200--Sobic010G194500
Octagon: transcription factors


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