Gene annotation
Transcriptome id Sobic.001G303000.1
Synonym
Functional annotation zinc finger family protein, putative, expressed
UniProt A0A1B6QM22
Pfam -
Panther DB PTHR31681 PTHR31681:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G12450 : -
RAP-DB (Rice) LOC_Os10g40584.1 : zinc finger family protein, putative, expressed
MaizeGDB (Corn) Zm00025a012216 , Zm00025a021396 , Zm00025a003304 , Zm00025a055441 , Zm00025a051993
Brachypodium PNT69182 , PNT78378
Barley HORVU0Hr1G009370.1 , HORVU1Hr1G053950.1 , HORVU6Hr1G063400.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G139000 ZF-HD protein dimerisation region containing protein, expressed -
2 Sobic.001G062700 GATA zinc finger domain containing protein, expressed -
3 Sobic.004G061600 expressed protein -
4 Sobic.003G390300 expressed protein -
5 Sobic.003G111600 expressed protein -
6 Sobic.003G191800 helix-loop-helix DNA-binding domain containing protein, expressed -
7 Sobic.005G102200 1-aminocyclopropane-1-carboxylate oxidase homolog 1, putative, expressed -
8 Sobic.002G101800 OsFBX281 - F-box domain containing protein, expressed -
9 Sobic.008G136900 expressed protein -
10 Sobic.006G123700 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
11 Sobic.001G137200 homeobox domain containing protein, expressed -
12 Sobic.010G119600 embryogenesis transmembrane protein, putative, expressed -
13 Sobic.003G407500 - -
14 Sobic.001G397900 "Controlling grain color, orthologous to the maize p1"(PubMedID : 20585750)@"induction of chs, chi, dfr, f3'h 3-deoxyanthocyanidins biosynthesis responsive genes "(PubMedID : 25647576)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
15 Sobic.010G014900 expressed protein -
16 Sobic.001G483700 Cupin domain containing protein, expressed -
17 Sobic.010G152700 helix-loop-helix DNA-binding domain containing protein, expressed -
18 Sobic.006G155200 TGF-beta receptor, type I/II extracellular region, putative, expressed -
19 Sobic.007G206700 lectin-like protein kinase, putative, expressed -
20 Sobic.003G104900 methyltransferase, putative, expressed K08241: jasmonate O-methyltransferase


Gene co-expression network
sample Sobic001G303000 Sobic001G303000 Sobic007G139000 Sobic007G139000 Sobic001G303000--Sobic007G139000 Sobic001G062700 Sobic001G062700 Sobic001G303000--Sobic001G062700 Sobic004G061600 Sobic004G061600 Sobic001G303000--Sobic004G061600 Sobic003G390300 Sobic003G390300 Sobic001G303000--Sobic003G390300 Sobic003G111600 Sobic003G111600 Sobic001G303000--Sobic003G111600 Sobic003G191800 Sobic003G191800 Sobic001G303000--Sobic003G191800 Sobic005G102200 Sobic005G102200 Sobic001G303000--Sobic005G102200 Sobic002G101800 Sobic002G101800 Sobic001G303000--Sobic002G101800 Sobic008G136900 Sobic008G136900 Sobic001G303000--Sobic008G136900 Sobic007G139000--Sobic003G191800 Sobic007G139000--Sobic005G102200 Sobic001G137200 Sobic001G137200 Sobic007G139000--Sobic001G137200 Sobic010G152700 Sobic010G152700 Sobic007G139000--Sobic010G152700 Sobic007G139000--Sobic002G101800 Sobic007G139000--Sobic003G111600 Sobic001G483700 Sobic001G483700 Sobic007G139000--Sobic001G483700 Sobic002G285525 Sobic002G285525 Sobic007G139000--Sobic002G285525 Sobic010G014900 Sobic010G014900 Sobic007G139000--Sobic010G014900 Sobic001G062700--Sobic003G390300 Sobic001G062700--Sobic004G061600 Sobic001G062700--Sobic008G136900 Sobic007G092300 Sobic007G092300 Sobic001G062700--Sobic007G092300 Sobic010G119600 Sobic010G119600 Sobic001G062700--Sobic010G119600 Sobic010G259200 Sobic010G259200 Sobic001G062700--Sobic010G259200 Sobic007G206700 Sobic007G206700 Sobic001G062700--Sobic007G206700 Sobic001G062700--Sobic010G014900 Sobic004G107400 Sobic004G107400 Sobic001G062700--Sobic004G107400 Sobic004G061600--Sobic003G390300 Sobic007G158400 Sobic007G158400 Sobic004G061600--Sobic007G158400 Sobic004G061600--Sobic008G136900 Sobic004G061600--Sobic010G014900 Sobic004G061600--Sobic001G062700 Sobic004G061600--Sobic004G107400 Sobic005G168500 Sobic005G168500 Sobic004G061600--Sobic005G168500 Sobic004G061600--Sobic001G137200 Sobic006G273500 Sobic006G273500 Sobic004G061600--Sobic006G273500 Sobic003G390300--Sobic004G107400 Sobic003G390300--Sobic004G061600 Sobic003G390300--Sobic008G136900 Sobic003G390300--Sobic001G062700 Sobic003G104900 Sobic003G104900 Sobic003G390300--Sobic003G104900 Sobic003G390300--Sobic010G014900 Sobic003G390300--Sobic007G158400 Sobic003G390300--Sobic001G137200 Sobic009G028600 Sobic009G028600 Sobic003G390300--Sobic009G028600 Sobic003G111600--Sobic005G102200 Sobic003G111600--Sobic003G191800 Sobic003G111600--Sobic007G139000 Sobic003G111600--Sobic002G101800 Sobic003G111600--Sobic001G483700 Sobic003G111600--Sobic001G137200 Sobic003G111600--Sobic010G152700 Sobic003G111600--Sobic002G285525 Sobic009G187500 Sobic009G187500 Sobic003G111600--Sobic009G187500 Sobic003G191800--Sobic005G102200 Sobic003G191800--Sobic010G152700 Sobic003G191800--Sobic001G137200 Sobic003G191800--Sobic007G139000 Sobic003G191800--Sobic001G483700 Sobic005G209800 Sobic005G209800 Sobic003G191800--Sobic005G209800 Sobic007G072400 Sobic007G072400 Sobic003G191800--Sobic007G072400 Sobic006G171000 Sobic006G171000 Sobic003G191800--Sobic006G171000 Sobic008G002100 Sobic008G002100 Sobic003G191800--Sobic008G002100 Sobic005G102200--Sobic003G191800 Sobic005G102200--Sobic010G152700 Sobic005G102200--Sobic001G137200 Sobic005G102200--Sobic001G483700 Sobic005G102200--Sobic002G101800 Sobic005G102200--Sobic002G285525 Sobic001G527400 Sobic001G527400 Sobic005G102200--Sobic001G527400 Sobic005G102200--Sobic005G209800 Sobic005G102200--Sobic008G002100 Sobic002G101800--Sobic005G102200 Sobic002G101800--Sobic003G191800 Sobic006G123700 Sobic006G123700 Sobic002G101800--Sobic006G123700 Sobic002G101800--Sobic010G152700 Sobic002G101800--Sobic007G139000 Sobic002G101800--Sobic001G137200 Sobic002G101800--Sobic001G483700 Sobic002G101800--Sobic002G285525 Sobic002G101800--Sobic003G111600 Sobic008G136900--Sobic003G390300 Sobic008G136900--Sobic004G061600 Sobic008G136900--Sobic004G107400 Sobic001G103400 Sobic001G103400 Sobic008G136900--Sobic001G103400 Sobic008G136900--Sobic007G158400 Sobic008G136900--Sobic001G483700 Sobic008G136900--Sobic010G014900 Sobic008G136900--Sobic003G104900 Sobic008G136900--Sobic009G028600
Octagon: transcription factors


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