Gene annotation
Transcriptome id Sobic.006G155200.1
Synonym Sb06g023230
Functional annotation TGF-beta receptor, type I/II extracellular region, putative, expressed
UniProt C5YCI8
Pfam PF00854
Panther DB PTHR11654 PTHR11654:SF100
NCBI CDD KOG1237; H+/oligopeptide symporter
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT1G59740 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os04g41400.1 : peptide transporter PTR2, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G397900 "Controlling grain color, orthologous to the maize p1"(PubMedID : 20585750)@"induction of chs, chi, dfr, f3'h 3-deoxyanthocyanidins biosynthesis responsive genes "(PubMedID : 25647576)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
2 Sobic.007G139000 ZF-HD protein dimerisation region containing protein, expressed -
3 Sobic.005G102200 1-aminocyclopropane-1-carboxylate oxidase homolog 1, putative, expressed -
4 Sobic.002G285525 - -
5 Sobic.003G191800 helix-loop-helix DNA-binding domain containing protein, expressed -
6 Sobic.002G101800 OsFBX281 - F-box domain containing protein, expressed -
7 Sobic.002G344100 - -
8 Sobic.003G111600 expressed protein -
9 Sobic.001G137200 homeobox domain containing protein, expressed -
10 Sobic.001G103400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@FHA domain containing protein, putative, expressed -
11 Sobic.003G290700 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
12 Sobic.006G163650 - -
13 Sobic.004G128800 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed -
14 Sobic.001G516200 expressed protein -
15 Sobic.001G483700 Cupin domain containing protein, expressed -
16 Sobic.010G152700 helix-loop-helix DNA-binding domain containing protein, expressed -
17 Sobic.006G169300 - -
18 Sobic.004G061600 expressed protein -
19 Sobic.009G223700 - -
20 Sobic.004G108900 - -


Gene co-expression network
sample Sobic006G155200 Sobic006G155200 Sobic001G397900 Sobic001G397900 Sobic006G155200--Sobic001G397900 Sobic007G139000 Sobic007G139000 Sobic006G155200--Sobic007G139000 Sobic005G102200 Sobic005G102200 Sobic006G155200--Sobic005G102200 Sobic002G285525 Sobic002G285525 Sobic006G155200--Sobic002G285525 Sobic003G191800 Sobic003G191800 Sobic006G155200--Sobic003G191800 Sobic002G101800 Sobic002G101800 Sobic006G155200--Sobic002G101800 Sobic002G344100 Sobic002G344100 Sobic006G155200--Sobic002G344100 Sobic003G111600 Sobic003G111600 Sobic006G155200--Sobic003G111600 Sobic001G137200 Sobic001G137200 Sobic006G155200--Sobic001G137200 Sobic001G397900--Sobic006G155200 Sobic001G397900--Sobic007G139000 Sobic001G397900--Sobic003G111600 Sobic006G163650 Sobic006G163650 Sobic001G397900--Sobic006G163650 Sobic001G397900--Sobic002G101800 Sobic004G061600 Sobic004G061600 Sobic001G397900--Sobic004G061600 Sobic001G303000 Sobic001G303000 Sobic001G397900--Sobic001G303000 Sobic001G397900--Sobic003G191800 Sobic001G397900--Sobic005G102200 Sobic007G139000--Sobic003G191800 Sobic007G139000--Sobic005G102200 Sobic007G139000--Sobic001G137200 Sobic010G152700 Sobic010G152700 Sobic007G139000--Sobic010G152700 Sobic007G139000--Sobic002G101800 Sobic007G139000--Sobic003G111600 Sobic001G483700 Sobic001G483700 Sobic007G139000--Sobic001G483700 Sobic007G139000--Sobic002G285525 Sobic010G014900 Sobic010G014900 Sobic007G139000--Sobic010G014900 Sobic005G102200--Sobic003G191800 Sobic005G102200--Sobic010G152700 Sobic005G102200--Sobic001G137200 Sobic005G102200--Sobic001G483700 Sobic005G102200--Sobic002G101800 Sobic005G102200--Sobic002G285525 Sobic001G527400 Sobic001G527400 Sobic005G102200--Sobic001G527400 Sobic005G209800 Sobic005G209800 Sobic005G102200--Sobic005G209800 Sobic008G002100 Sobic008G002100 Sobic005G102200--Sobic008G002100 Sobic007G183000 Sobic007G183000 Sobic002G285525--Sobic007G183000 Sobic002G285525--Sobic001G527400 Sobic004G226300 Sobic004G226300 Sobic002G285525--Sobic004G226300 Sobic003G290700 Sobic003G290700 Sobic002G285525--Sobic003G290700 Sobic008G023000 Sobic008G023000 Sobic002G285525--Sobic008G023000 Sobic002G285525--Sobic008G002100 Sobic002G048250 Sobic002G048250 Sobic002G285525--Sobic002G048250 Sobic002G285525--Sobic005G209800 Sobic004G224300 Sobic004G224300 Sobic002G285525--Sobic004G224300 Sobic003G191800--Sobic005G102200 Sobic003G191800--Sobic010G152700 Sobic003G191800--Sobic001G137200 Sobic003G191800--Sobic007G139000 Sobic003G191800--Sobic001G483700 Sobic003G191800--Sobic005G209800 Sobic007G072400 Sobic007G072400 Sobic003G191800--Sobic007G072400 Sobic006G171000 Sobic006G171000 Sobic003G191800--Sobic006G171000 Sobic003G191800--Sobic008G002100 Sobic002G101800--Sobic005G102200 Sobic002G101800--Sobic003G191800 Sobic006G123700 Sobic006G123700 Sobic002G101800--Sobic006G123700 Sobic002G101800--Sobic010G152700 Sobic002G101800--Sobic007G139000 Sobic002G101800--Sobic001G137200 Sobic002G101800--Sobic001G483700 Sobic002G101800--Sobic002G285525 Sobic002G101800--Sobic003G111600 Sobic002G344100--Sobic005G102200 Sobic002G344100--Sobic001G137200 Sobic002G344100--Sobic002G285525 Sobic002G344100--Sobic005G209800 Sobic002G344100--Sobic001G527400 Sobic002G344100--Sobic008G002100 Sobic002G173600 Sobic002G173600 Sobic002G344100--Sobic002G173600 Sobic002G344100--Sobic010G152700 Sobic002G344100--Sobic008G023000 Sobic003G111600--Sobic005G102200 Sobic003G111600--Sobic003G191800 Sobic003G111600--Sobic007G139000 Sobic003G111600--Sobic002G101800 Sobic003G111600--Sobic001G483700 Sobic003G111600--Sobic001G137200 Sobic003G111600--Sobic010G152700 Sobic003G111600--Sobic002G285525 Sobic009G187500 Sobic009G187500 Sobic003G111600--Sobic009G187500 Sobic001G137200--Sobic002G285525 Sobic001G137200--Sobic010G152700 Sobic001G137200--Sobic006G171000 Sobic001G137200--Sobic005G209800 Sobic001G137200--Sobic004G226300 Sobic001G137200--Sobic008G002100 Sobic001G137200--Sobic007G183000 Sobic001G137200--Sobic001G483700 Sobic001G137200--Sobic001G527400
Octagon: transcription factors


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