Gene annotation
Transcriptome id Sobic.001G516200.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6QQQ1
Pfam PF03087
Panther DB PTHR33070 PTHR33070:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G76240 : Arabidopsis protein of unknown function (DUF241)
RAP-DB (Rice) LOC_Os03g04040.1 : expressed protein
MaizeGDB (Corn) Zm00025a000461
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G191800 helix-loop-helix DNA-binding domain containing protein, expressed -
2 Sobic.005G102200 1-aminocyclopropane-1-carboxylate oxidase homolog 1, putative, expressed -
3 Sobic.010G152700 helix-loop-helix DNA-binding domain containing protein, expressed -
4 Sobic.001G483700 Cupin domain containing protein, expressed -
5 Sobic.007G072400 phosphoribosyl transferase, putative, expressed -
6 Sobic.007G183000 helix-loop-helix DNA-binding domain containing protein, expressed -
7 Sobic.002G285525 - -
8 Sobic.004G226300 expressed protein -
9 Sobic.007G139000 ZF-HD protein dimerisation region containing protein, expressed -
10 Sobic.006G169300 - -
11 Sobic.001G137200 homeobox domain containing protein, expressed -
12 Sobic.001G527400 - -
13 Sobic.009G223700 - -
14 Sobic.002G048250 - -
15 Sobic.003G290700 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
16 Sobic.006G171000 Highest expression level in primordial inflorescence(PubMedID : 27501690)@OsSPL7 - SBP-box gene family member, expressed -
17 Sobic.004G347866 - -
18 Sobic.008G002100 zinc finger, C3HC4 type domain containing protein -
19 Sobic.008G023000 expressed protein -
20 Sobic.005G231800 tropinone reductase, putative, expressed K08081: tropinone reductase I


Gene co-expression network
sample Sobic001G516200 Sobic001G516200 Sobic003G191800 Sobic003G191800 Sobic001G516200--Sobic003G191800 Sobic005G102200 Sobic005G102200 Sobic001G516200--Sobic005G102200 Sobic010G152700 Sobic010G152700 Sobic001G516200--Sobic010G152700 Sobic001G483700 Sobic001G483700 Sobic001G516200--Sobic001G483700 Sobic007G072400 Sobic007G072400 Sobic001G516200--Sobic007G072400 Sobic007G183000 Sobic007G183000 Sobic001G516200--Sobic007G183000 Sobic002G285525 Sobic002G285525 Sobic001G516200--Sobic002G285525 Sobic004G226300 Sobic004G226300 Sobic001G516200--Sobic004G226300 Sobic007G139000 Sobic007G139000 Sobic001G516200--Sobic007G139000 Sobic003G191800--Sobic005G102200 Sobic003G191800--Sobic010G152700 Sobic001G137200 Sobic001G137200 Sobic003G191800--Sobic001G137200 Sobic003G191800--Sobic007G139000 Sobic003G191800--Sobic001G483700 Sobic005G209800 Sobic005G209800 Sobic003G191800--Sobic005G209800 Sobic003G191800--Sobic007G072400 Sobic006G171000 Sobic006G171000 Sobic003G191800--Sobic006G171000 Sobic008G002100 Sobic008G002100 Sobic003G191800--Sobic008G002100 Sobic005G102200--Sobic003G191800 Sobic005G102200--Sobic010G152700 Sobic005G102200--Sobic001G137200 Sobic005G102200--Sobic001G483700 Sobic002G101800 Sobic002G101800 Sobic005G102200--Sobic002G101800 Sobic005G102200--Sobic002G285525 Sobic001G527400 Sobic001G527400 Sobic005G102200--Sobic001G527400 Sobic005G102200--Sobic005G209800 Sobic005G102200--Sobic008G002100 Sobic010G152700--Sobic001G137200 Sobic010G152700--Sobic006G171000 Sobic010G152700--Sobic008G002100 Sobic010G152700--Sobic001G527400 Sobic010G152700--Sobic005G209800 Sobic010G152700--Sobic007G183000 Sobic008G023000 Sobic008G023000 Sobic010G152700--Sobic008G023000 Sobic010G152700--Sobic004G226300 Sobic010G152700--Sobic002G285525 Sobic001G483700--Sobic004G226300 Sobic001G483700--Sobic007G183000 Sobic001G483700--Sobic005G209800 Sobic001G483700--Sobic001G137200 Sobic001G483700--Sobic002G285525 Sobic001G483700--Sobic001G527400 Sobic001G483700--Sobic008G002100 Sobic003G104900 Sobic003G104900 Sobic001G483700--Sobic003G104900 Sobic001G483700--Sobic008G023000 Sobic007G072400--Sobic001G527400 Sobic007G072400--Sobic006G171000 Sobic007G072400--Sobic008G002100 Sobic007G072400--Sobic005G209800 Sobic007G072400--Sobic007G183000 Sobic007G072400--Sobic008G023000 Sobic007G072400--Sobic004G226300 Sobic003G173032 Sobic003G173032 Sobic007G072400--Sobic003G173032 Sobic007G072400--Sobic001G137200 Sobic007G183000--Sobic004G226300 Sobic007G183000--Sobic001G527400 Sobic002G048250 Sobic002G048250 Sobic007G183000--Sobic002G048250 Sobic007G183000--Sobic008G023000 Sobic007G183000--Sobic008G002100 Sobic005G231800 Sobic005G231800 Sobic007G183000--Sobic005G231800 Sobic007G183000--Sobic005G209800 Sobic007G183000--Sobic003G173032 Sobic007G183000--Sobic006G171000 Sobic002G285525--Sobic007G183000 Sobic002G285525--Sobic001G527400 Sobic002G285525--Sobic004G226300 Sobic003G290700 Sobic003G290700 Sobic002G285525--Sobic003G290700 Sobic002G285525--Sobic008G023000 Sobic002G285525--Sobic008G002100 Sobic002G285525--Sobic002G048250 Sobic002G285525--Sobic005G209800 Sobic004G224300 Sobic004G224300 Sobic002G285525--Sobic004G224300 Sobic004G226300--Sobic007G183000 Sobic004G226300--Sobic001G527400 Sobic004G226300--Sobic008G023000 Sobic004G226300--Sobic008G002100 Sobic004G226300--Sobic002G048250 Sobic004G226300--Sobic005G231800 Sobic004G226300--Sobic005G209800 Sobic004G226300--Sobic006G171000 Sobic004G226300--Sobic003G173032 Sobic007G139000--Sobic003G191800 Sobic007G139000--Sobic005G102200 Sobic007G139000--Sobic001G137200 Sobic007G139000--Sobic010G152700 Sobic007G139000--Sobic002G101800 Sobic003G111600 Sobic003G111600 Sobic007G139000--Sobic003G111600 Sobic007G139000--Sobic001G483700 Sobic007G139000--Sobic002G285525 Sobic010G014900 Sobic010G014900 Sobic007G139000--Sobic010G014900
Octagon: transcription factors


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