Gene annotation
Transcriptome id Sobic.003G111600.1
Synonym Sb03g009390
Functional annotation expressed protein
UniProt C5XFQ5
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g14640.1 : expressed protein
MaizeGDB (Corn) Zm00025a023907
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G102200 1-aminocyclopropane-1-carboxylate oxidase homolog 1, putative, expressed -
2 Sobic.003G191800 helix-loop-helix DNA-binding domain containing protein, expressed -
3 Sobic.007G139000 ZF-HD protein dimerisation region containing protein, expressed -
4 Sobic.002G101800 OsFBX281 - F-box domain containing protein, expressed -
5 Sobic.001G483700 Cupin domain containing protein, expressed -
6 Sobic.001G137200 homeobox domain containing protein, expressed -
7 Sobic.010G152700 helix-loop-helix DNA-binding domain containing protein, expressed -
8 Sobic.002G285525 - -
9 Sobic.009G187500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MONOCULM 1, putative, expressed -
10 Sobic.003G104900 methyltransferase, putative, expressed K08241: jasmonate O-methyltransferase
11 Sobic.010G156800 zinc finger, C3HC4 type domain containing protein, expressed -
12 Sobic.005G209800 nodulin, putative, expressed -
13 Sobic.010G002850 - -
14 Sobic.002G344100 - -
15 Sobic.002G003100 gibberellin 2-beta-dioxygenase 7, putative, expressed K04125: gibberellin 2beta-dioxygenase
16 Sobic.008G002100 zinc finger, C3HC4 type domain containing protein -
17 Sobic.001G104400 expressed protein -
18 Sobic.010G119600 embryogenesis transmembrane protein, putative, expressed -
19 Sobic.007G183000 helix-loop-helix DNA-binding domain containing protein, expressed -
20 Sobic.004G226300 expressed protein -


Gene co-expression network
sample Sobic003G111600 Sobic003G111600 Sobic005G102200 Sobic005G102200 Sobic003G111600--Sobic005G102200 Sobic003G191800 Sobic003G191800 Sobic003G111600--Sobic003G191800 Sobic007G139000 Sobic007G139000 Sobic003G111600--Sobic007G139000 Sobic002G101800 Sobic002G101800 Sobic003G111600--Sobic002G101800 Sobic001G483700 Sobic001G483700 Sobic003G111600--Sobic001G483700 Sobic001G137200 Sobic001G137200 Sobic003G111600--Sobic001G137200 Sobic010G152700 Sobic010G152700 Sobic003G111600--Sobic010G152700 Sobic002G285525 Sobic002G285525 Sobic003G111600--Sobic002G285525 Sobic009G187500 Sobic009G187500 Sobic003G111600--Sobic009G187500 Sobic005G102200--Sobic003G191800 Sobic005G102200--Sobic010G152700 Sobic005G102200--Sobic001G137200 Sobic005G102200--Sobic001G483700 Sobic005G102200--Sobic002G101800 Sobic005G102200--Sobic002G285525 Sobic001G527400 Sobic001G527400 Sobic005G102200--Sobic001G527400 Sobic005G209800 Sobic005G209800 Sobic005G102200--Sobic005G209800 Sobic008G002100 Sobic008G002100 Sobic005G102200--Sobic008G002100 Sobic003G191800--Sobic005G102200 Sobic003G191800--Sobic010G152700 Sobic003G191800--Sobic001G137200 Sobic003G191800--Sobic007G139000 Sobic003G191800--Sobic001G483700 Sobic003G191800--Sobic005G209800 Sobic007G072400 Sobic007G072400 Sobic003G191800--Sobic007G072400 Sobic006G171000 Sobic006G171000 Sobic003G191800--Sobic006G171000 Sobic003G191800--Sobic008G002100 Sobic007G139000--Sobic003G191800 Sobic007G139000--Sobic005G102200 Sobic007G139000--Sobic001G137200 Sobic007G139000--Sobic010G152700 Sobic007G139000--Sobic002G101800 Sobic007G139000--Sobic003G111600 Sobic007G139000--Sobic001G483700 Sobic007G139000--Sobic002G285525 Sobic010G014900 Sobic010G014900 Sobic007G139000--Sobic010G014900 Sobic002G101800--Sobic005G102200 Sobic002G101800--Sobic003G191800 Sobic006G123700 Sobic006G123700 Sobic002G101800--Sobic006G123700 Sobic002G101800--Sobic010G152700 Sobic002G101800--Sobic007G139000 Sobic002G101800--Sobic001G137200 Sobic002G101800--Sobic001G483700 Sobic002G101800--Sobic002G285525 Sobic002G101800--Sobic003G111600 Sobic004G226300 Sobic004G226300 Sobic001G483700--Sobic004G226300 Sobic007G183000 Sobic007G183000 Sobic001G483700--Sobic007G183000 Sobic001G483700--Sobic005G209800 Sobic001G483700--Sobic001G137200 Sobic001G483700--Sobic002G285525 Sobic001G483700--Sobic001G527400 Sobic001G483700--Sobic008G002100 Sobic003G104900 Sobic003G104900 Sobic001G483700--Sobic003G104900 Sobic008G023000 Sobic008G023000 Sobic001G483700--Sobic008G023000 Sobic001G137200--Sobic002G285525 Sobic001G137200--Sobic010G152700 Sobic001G137200--Sobic006G171000 Sobic001G137200--Sobic005G209800 Sobic001G137200--Sobic004G226300 Sobic001G137200--Sobic008G002100 Sobic001G137200--Sobic007G183000 Sobic001G137200--Sobic001G483700 Sobic001G137200--Sobic001G527400 Sobic010G152700--Sobic001G137200 Sobic010G152700--Sobic006G171000 Sobic010G152700--Sobic008G002100 Sobic010G152700--Sobic001G527400 Sobic010G152700--Sobic005G209800 Sobic010G152700--Sobic007G183000 Sobic010G152700--Sobic008G023000 Sobic010G152700--Sobic004G226300 Sobic010G152700--Sobic002G285525 Sobic002G285525--Sobic007G183000 Sobic002G285525--Sobic001G527400 Sobic002G285525--Sobic004G226300 Sobic003G290700 Sobic003G290700 Sobic002G285525--Sobic003G290700 Sobic002G285525--Sobic008G023000 Sobic002G285525--Sobic008G002100 Sobic002G048250 Sobic002G048250 Sobic002G285525--Sobic002G048250 Sobic002G285525--Sobic005G209800 Sobic004G224300 Sobic004G224300 Sobic002G285525--Sobic004G224300 Sobic009G187500--Sobic002G048250 Sobic009G187500--Sobic008G002100 Sobic004G089700 Sobic004G089700 Sobic009G187500--Sobic004G089700 Sobic009G187500--Sobic007G183000 Sobic009G187500--Sobic001G527400 Sobic009G187500--Sobic008G023000 Sobic009G187500--Sobic005G209800 Sobic009G187500--Sobic004G226300 Sobic009G187500--Sobic004G224300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.