Gene annotation
Transcriptome id Sobic.008G140800.1
Synonym Sb08g019150
Functional annotation expressed protein
UniProt C5YQD3
Pfam -
Panther DB PTHR33133 PTHR33133:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G61340 : -
RAP-DB (Rice) LOC_Os12g38810.1 : expressed protein
MaizeGDB (Corn) Zm00025a004308 , Zm00025a025389
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.008G140800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G039100 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
2 Sobic.007G091900 ATP binding protein, putative, expressed -
3 Sobic.009G226900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin-responsive protein, putative, expressed -
4 Sobic.009G153800 protein kinase, putative, expressed K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5
5 Sobic.002G005200 dirigent, putative, expressed -
6 Sobic.003G031400 harpin-induced protein 1 domain containing protein, expressed -
7 Sobic.008G059800 expressed protein -
8 Sobic.004G007800 protein kinase, putative, expressed -
9 Sobic.003G062000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fasciclin domain containing protein, expressed -
10 Sobic.002G003200 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.003G427900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
12 Sobic.002G164600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@microtubule-associated protein, putative, expressed -
13 Sobic.003G387500 IQ calmodulin-binding motif domain containing protein, expressed -
14 Sobic.002G072200 expressed protein -
15 Sobic.004G161400 protein binding protein, putative, expressed K19042: E3 ubiquitin-protein ligase BOI and related proteins
16 Sobic.004G319600 polygalacturonase, putative, expressed -
17 Sobic.008G112200 Expressed in middle stem(PubMedID : 28649278)@myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
18 Sobic.009G032600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
19 Sobic.005G087200 plant-specific domain TIGR01627 family protein, expressed K18801: glucuronoxylan 4-O-methyltransferase
20 Sobic.006G075000 Late embryogenesis abundant hydroxyproline-rich glycoprotein("PubMedID : 26759170,PubMedID : 24597475")@harpin-induced protein 1 domain containing protein, expressed -


Gene co-expression network
sample Sobic008G140800 Sobic008G140800 Sobic007G039100 Sobic007G039100 Sobic008G140800--Sobic007G039100 Sobic007G091900 Sobic007G091900 Sobic008G140800--Sobic007G091900 Sobic009G226900 Sobic009G226900 Sobic008G140800--Sobic009G226900 Sobic009G153800 Sobic009G153800 Sobic008G140800--Sobic009G153800 Sobic002G005200 Sobic002G005200 Sobic008G140800--Sobic002G005200 Sobic003G031400 Sobic003G031400 Sobic008G140800--Sobic003G031400 Sobic008G059800 Sobic008G059800 Sobic008G140800--Sobic008G059800 Sobic004G007800 Sobic004G007800 Sobic008G140800--Sobic004G007800 Sobic003G062000 Sobic003G062000 Sobic008G140800--Sobic003G062000 Sobic007G039100--Sobic008G140800 Sobic007G039100--Sobic002G005200 Sobic002G164600 Sobic002G164600 Sobic007G039100--Sobic002G164600 Sobic007G223600 Sobic007G223600 Sobic007G039100--Sobic007G223600 Sobic007G039100--Sobic009G153800 Sobic003G236701 Sobic003G236701 Sobic007G039100--Sobic003G236701 Sobic007G039100--Sobic007G091900 Sobic007G039100--Sobic008G059800 Sobic004G161400 Sobic004G161400 Sobic007G039100--Sobic004G161400 Sobic001G302300 Sobic001G302300 Sobic007G091900--Sobic001G302300 Sobic003G270400 Sobic003G270400 Sobic007G091900--Sobic003G270400 Sobic007G119500 Sobic007G119500 Sobic007G091900--Sobic007G119500 Sobic003G366300 Sobic003G366300 Sobic007G091900--Sobic003G366300 Sobic001G406700 Sobic001G406700 Sobic007G091900--Sobic001G406700 Sobic004G047600 Sobic004G047600 Sobic007G091900--Sobic004G047600 Sobic003G387500 Sobic003G387500 Sobic007G091900--Sobic003G387500 Sobic004G319600 Sobic004G319600 Sobic007G091900--Sobic004G319600 Sobic003G378800 Sobic003G378800 Sobic007G091900--Sobic003G378800 Sobic009G226900--Sobic003G062000 Sobic001G224300 Sobic001G224300 Sobic009G226900--Sobic001G224300 Sobic003G296400 Sobic003G296400 Sobic009G226900--Sobic003G296400 Sobic002G205500 Sobic002G205500 Sobic009G226900--Sobic002G205500 Sobic009G226900--Sobic003G387500 Sobic006G036400 Sobic006G036400 Sobic009G226900--Sobic006G036400 Sobic009G226900--Sobic001G406700 Sobic005G087200 Sobic005G087200 Sobic009G226900--Sobic005G087200 Sobic006G075000 Sobic006G075000 Sobic009G226900--Sobic006G075000 Sobic009G153800--Sobic008G059800 Sobic002G003200 Sobic002G003200 Sobic009G153800--Sobic002G003200 Sobic004G344200 Sobic004G344200 Sobic009G153800--Sobic004G344200 Sobic010G199700 Sobic010G199700 Sobic009G153800--Sobic010G199700 Sobic003G352800 Sobic003G352800 Sobic009G153800--Sobic003G352800 Sobic008G112200 Sobic008G112200 Sobic009G153800--Sobic008G112200 Sobic009G153800--Sobic002G164600 Sobic009G241600 Sobic009G241600 Sobic009G153800--Sobic009G241600 Sobic009G153800--Sobic003G236701 Sobic009G076800 Sobic009G076800 Sobic002G005200--Sobic009G076800 Sobic001G005000 Sobic001G005000 Sobic002G005200--Sobic001G005000 Sobic004G153700 Sobic004G153700 Sobic002G005200--Sobic004G153700 Sobic010G008000 Sobic010G008000 Sobic002G005200--Sobic010G008000 Sobic006G257100 Sobic006G257100 Sobic002G005200--Sobic006G257100 Sobic002G005200--Sobic007G039100 Sobic002G005200--Sobic001G302300 Sobic002G005200--Sobic008G140800 Sobic010G194500 Sobic010G194500 Sobic002G005200--Sobic010G194500 Sobic001G037400 Sobic001G037400 Sobic003G031400--Sobic001G037400 Sobic003G031400--Sobic004G007800 Sobic010G228100 Sobic010G228100 Sobic003G031400--Sobic010G228100 Sobic001G451800 Sobic001G451800 Sobic003G031400--Sobic001G451800 Sobic004G243800 Sobic004G243800 Sobic003G031400--Sobic004G243800 Sobic003G031400--Sobic007G091900 Sobic003G031400--Sobic008G140800 Sobic004G288500 Sobic004G288500 Sobic003G031400--Sobic004G288500 Sobic007G113900 Sobic007G113900 Sobic003G031400--Sobic007G113900 Sobic008G059800--Sobic002G164600 Sobic008G059800--Sobic003G236701 Sobic008G059800--Sobic009G241600 Sobic008G059800--Sobic009G153800 Sobic008G059800--Sobic010G199700 Sobic008G059800--Sobic007G223600 Sobic008G059800--Sobic008G112200 Sobic008G059800--Sobic009G226900 Sobic006G066500 Sobic006G066500 Sobic008G059800--Sobic006G066500 Sobic004G007800--Sobic003G031400 Sobic008G083300 Sobic008G083300 Sobic004G007800--Sobic008G083300 Sobic006G009900 Sobic006G009900 Sobic004G007800--Sobic006G009900 Sobic008G183500 Sobic008G183500 Sobic004G007800--Sobic008G183500 Sobic004G007800--Sobic007G091900 Sobic004G007800--Sobic008G140800 Sobic001G253900 Sobic001G253900 Sobic004G007800--Sobic001G253900 Sobic001G189500 Sobic001G189500 Sobic004G007800--Sobic001G189500 Sobic004G007800--Sobic002G005200 Sobic003G062000--Sobic009G226900 Sobic003G062000--Sobic006G036400 Sobic010G086800 Sobic010G086800 Sobic003G062000--Sobic010G086800 Sobic003G062000--Sobic001G224300 Sobic003G062000--Sobic003G296400 Sobic002G072200 Sobic002G072200 Sobic003G062000--Sobic002G072200 Sobic003G062000--Sobic006G075000 Sobic009G032600 Sobic009G032600 Sobic003G062000--Sobic009G032600 Sobic003G386200 Sobic003G386200 Sobic003G062000--Sobic003G386200
Octagon: transcription factors


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