Gene annotation
Transcriptome id Sobic.003G062000.1
Synonym Sb03g005280, ATFLA11, FLA11
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
fasciclin domain containing protein, expressed
UniProt C5XP78
Pfam PF02469
Panther DB PTHR32077 PTHR32077:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G03170 : FASCICLIN-like arabinogalactan-protein 11
RAP-DB (Rice) LOC_Os01g06580.1 : fasciclin domain containing protein, expressed
MaizeGDB (Corn) Zm00025a023358
Brachypodium KQK02229
Barley HORVU3Hr1G018810.3 , HORVU3Hr1G018810.2 , HORVU3Hr1G018810.1
Wheat -
Populus -


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cDNA sequences
Sobic.003G062000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G226900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin-responsive protein, putative, expressed -
2 Sobic.006G036400 zinc finger, C3HC4 type domain containing protein, expressed -
3 Sobic.010G086800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
4 Sobic.001G224300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@-(PubMedID : 28944535)@CESA7 - cellulose synthase, expressed K10999: cellulose synthase A
5 Sobic.003G296400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CESA4 - cellulose synthase, expressed K10999: cellulose synthase A
6 Sobic.002G072200 expressed protein -
7 Sobic.006G075000 Late embryogenesis abundant hydroxyproline-rich glycoprotein("PubMedID : 26759170,PubMedID : 24597475")@harpin-induced protein 1 domain containing protein, expressed -
8 Sobic.009G032600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
9 Sobic.003G386200 zinc finger, C3HC4 type domain containing protein, expressed -
10 Sobic.002G205500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@CESA9 - cellulose synthase, expressed K10999: cellulose synthase A
11 Sobic.009G162500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K05280: flavonoid 3'-monooxygenase
12 Sobic.003G352700 similar to Putative laccase(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Laccase 17 LAC17 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
13 Sobic.002G003200 peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.003G427900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
15 Sobic.001G208600 receptor kinase like protein, putative, expressed -
16 Sobic.005G087400 alpha-N-arabinofuranosidase A, putative, expressed K01209: alpha-L-arabinofuranosidase
17 Sobic.001G409100 glycosyltransferase family 43 protein, putative, expressed -
18 Sobic.004G168700 harpin-induced protein 1 domain containing protein, expressed -
19 Sobic.002G028500 app1, putative, expressed -
20 Sobic.008G164900 membrane associated DUF588 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G062000 Sobic003G062000 Sobic009G226900 Sobic009G226900 Sobic003G062000--Sobic009G226900 Sobic006G036400 Sobic006G036400 Sobic003G062000--Sobic006G036400 Sobic010G086800 Sobic010G086800 Sobic003G062000--Sobic010G086800 Sobic001G224300 Sobic001G224300 Sobic003G062000--Sobic001G224300 Sobic003G296400 Sobic003G296400 Sobic003G062000--Sobic003G296400 Sobic002G072200 Sobic002G072200 Sobic003G062000--Sobic002G072200 Sobic006G075000 Sobic006G075000 Sobic003G062000--Sobic006G075000 Sobic009G032600 Sobic009G032600 Sobic003G062000--Sobic009G032600 Sobic003G386200 Sobic003G386200 Sobic003G062000--Sobic003G386200 Sobic009G226900--Sobic003G062000 Sobic009G226900--Sobic001G224300 Sobic009G226900--Sobic003G296400 Sobic002G205500 Sobic002G205500 Sobic009G226900--Sobic002G205500 Sobic003G387500 Sobic003G387500 Sobic009G226900--Sobic003G387500 Sobic009G226900--Sobic006G036400 Sobic001G406700 Sobic001G406700 Sobic009G226900--Sobic001G406700 Sobic005G087200 Sobic005G087200 Sobic009G226900--Sobic005G087200 Sobic009G226900--Sobic006G075000 Sobic006G036400--Sobic001G224300 Sobic006G036400--Sobic003G296400 Sobic006G036400--Sobic003G062000 Sobic006G036400--Sobic002G205500 Sobic001G409100 Sobic001G409100 Sobic006G036400--Sobic001G409100 Sobic009G034300 Sobic009G034300 Sobic006G036400--Sobic009G034300 Sobic006G036400--Sobic009G226900 Sobic001G360800 Sobic001G360800 Sobic006G036400--Sobic001G360800 Sobic004G221300 Sobic004G221300 Sobic006G036400--Sobic004G221300 Sobic010G086800--Sobic003G062000 Sobic004G168700 Sobic004G168700 Sobic010G086800--Sobic004G168700 Sobic010G086800--Sobic009G032600 Sobic010G086800--Sobic006G036400 Sobic010G086800--Sobic009G226900 Sobic003G427900 Sobic003G427900 Sobic010G086800--Sobic003G427900 Sobic010G086800--Sobic002G072200 Sobic001G107100 Sobic001G107100 Sobic010G086800--Sobic001G107100 Sobic009G162500 Sobic009G162500 Sobic010G086800--Sobic009G162500 Sobic001G224300--Sobic003G296400 Sobic001G224300--Sobic002G205500 Sobic001G224300--Sobic006G036400 Sobic001G224300--Sobic003G387500 Sobic001G224300--Sobic009G226900 Sobic007G223600 Sobic007G223600 Sobic001G224300--Sobic007G223600 Sobic001G224300--Sobic009G034300 Sobic001G224300--Sobic004G221300 Sobic001G224300--Sobic001G409100 Sobic003G296400--Sobic002G205500 Sobic003G296400--Sobic001G224300 Sobic003G296400--Sobic006G036400 Sobic003G296400--Sobic007G223600 Sobic006G226200 Sobic006G226200 Sobic003G296400--Sobic006G226200 Sobic003G296400--Sobic009G226900 Sobic009G048000 Sobic009G048000 Sobic003G296400--Sobic009G048000 Sobic003G296400--Sobic004G221300 Sobic003G236701 Sobic003G236701 Sobic003G296400--Sobic003G236701 Sobic002G072200--Sobic009G032600 Sobic002G072200--Sobic006G075000 Sobic002G072200--Sobic003G062000 Sobic002G072200--Sobic009G226900 Sobic009G232200 Sobic009G232200 Sobic002G072200--Sobic009G232200 Sobic002G072200--Sobic006G036400 Sobic002G072200--Sobic010G086800 Sobic001G208600 Sobic001G208600 Sobic002G072200--Sobic001G208600 Sobic003G099166 Sobic003G099166 Sobic002G072200--Sobic003G099166 Sobic010G096100 Sobic010G096100 Sobic006G075000--Sobic010G096100 Sobic006G075000--Sobic001G208600 Sobic001G484000 Sobic001G484000 Sobic006G075000--Sobic001G484000 Sobic006G075000--Sobic009G226900 Sobic006G075000--Sobic002G072200 Sobic006G075000--Sobic003G099166 Sobic003G352700 Sobic003G352700 Sobic006G075000--Sobic003G352700 Sobic009G026101 Sobic009G026101 Sobic006G075000--Sobic009G026101 Sobic002G338400 Sobic002G338400 Sobic006G075000--Sobic002G338400 Sobic009G032600--Sobic002G072200 Sobic009G032600--Sobic010G086800 Sobic009G032600--Sobic004G168700 Sobic009G032600--Sobic003G062000 Sobic009G032600--Sobic009G232200 Sobic009G032600--Sobic009G226900 Sobic009G032600--Sobic006G075000 Sobic004G319600 Sobic004G319600 Sobic009G032600--Sobic004G319600 Sobic009G032600--Sobic006G036400 Sobic003G386200--Sobic006G036400 Sobic003G386200--Sobic009G226900 Sobic003G386200--Sobic003G296400 Sobic003G386200--Sobic003G062000 Sobic003G386200--Sobic003G427900 Sobic003G386200--Sobic009G162500 Sobic003G386200--Sobic002G205500 Sobic003G386200--Sobic001G224300 Sobic001G534532 Sobic001G534532 Sobic003G386200--Sobic001G534532
Octagon: transcription factors


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