Gene annotation
Transcriptome id Sobic.003G427900.1
Synonym Sb03g046000, GLP10
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
Cupin domain containing protein, expressed
UniProt C5XHX4
Pfam PF07883
Panther DB PTHR31238:SF23 PTHR31238
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G62020 : germin-like protein 10
RAP-DB (Rice) LOC_Os01g72300.1 : Cupin domain containing protein, expressed
MaizeGDB (Corn) Zm00025a039119 , Zm00025a043626 , Zm00025a025978
Brachypodium KQK11562
Barley HORVU3Hr1G107930.3 , HORVU3Hr1G107930.2 , HORVU3Hr1G107930.1 , HORVU3Hr1G107870.1
Wheat TraesCSU02G057500 , TraesCS3D02G489700 , TraesCS3D02G490100 , TraesCS7D02G477200 , TraesCS3D02G490200 , TraesCS3A02G040900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G352800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Protein L-ascorbate oxidase precursor (Os)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
2 Sobic.010G086800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
3 Sobic.003G296400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CESA4 - cellulose synthase, expressed K10999: cellulose synthase A
4 Sobic.006G066500 expressed protein -
5 Sobic.009G226900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin-responsive protein, putative, expressed -
6 Sobic.001G468300 methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
7 Sobic.006G036400 zinc finger, C3HC4 type domain containing protein, expressed -
8 Sobic.003G386200 zinc finger, C3HC4 type domain containing protein, expressed -
9 Sobic.003G062000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fasciclin domain containing protein, expressed -
10 Sobic.002G205500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@CESA9 - cellulose synthase, expressed K10999: cellulose synthase A
11 Sobic.003G112200 Cupin domain containing protein, expressed -
12 Sobic.008G059800 expressed protein -
13 Sobic.001G224300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@-(PubMedID : 28944535)@CESA7 - cellulose synthase, expressed K10999: cellulose synthase A
14 Sobic.009G162500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K05280: flavonoid 3'-monooxygenase
15 Sobic.003G236701 - -
16 Sobic.003G220000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC-2 type transporter domain containing protein, expressed -
17 Sobic.002G072200 expressed protein -
18 Sobic.006G001000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@cytochrome P450 93A2, putative, expressed -
19 Sobic.007G223600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
20 Sobic.006G226200 kinesin motor domain containing protein, putative, expressed K10405: kinesin family member C1


Gene co-expression network
sample Sobic003G427900 Sobic003G427900 Sobic003G352800 Sobic003G352800 Sobic003G427900--Sobic003G352800 Sobic010G086800 Sobic010G086800 Sobic003G427900--Sobic010G086800 Sobic003G296400 Sobic003G296400 Sobic003G427900--Sobic003G296400 Sobic006G066500 Sobic006G066500 Sobic003G427900--Sobic006G066500 Sobic009G226900 Sobic009G226900 Sobic003G427900--Sobic009G226900 Sobic001G468300 Sobic001G468300 Sobic003G427900--Sobic001G468300 Sobic006G036400 Sobic006G036400 Sobic003G427900--Sobic006G036400 Sobic003G386200 Sobic003G386200 Sobic003G427900--Sobic003G386200 Sobic003G062000 Sobic003G062000 Sobic003G427900--Sobic003G062000 Sobic006G166800 Sobic006G166800 Sobic003G352800--Sobic006G166800 Sobic009G162800 Sobic009G162800 Sobic003G352800--Sobic009G162800 Sobic007G027200 Sobic007G027200 Sobic003G352800--Sobic007G027200 Sobic002G003200 Sobic002G003200 Sobic003G352800--Sobic002G003200 Sobic009G241600 Sobic009G241600 Sobic003G352800--Sobic009G241600 Sobic008G059800 Sobic008G059800 Sobic003G352800--Sobic008G059800 Sobic009G153800 Sobic009G153800 Sobic003G352800--Sobic009G153800 Sobic003G352800--Sobic003G427900 Sobic010G196400 Sobic010G196400 Sobic003G352800--Sobic010G196400 Sobic010G086800--Sobic003G062000 Sobic004G168700 Sobic004G168700 Sobic010G086800--Sobic004G168700 Sobic009G032600 Sobic009G032600 Sobic010G086800--Sobic009G032600 Sobic010G086800--Sobic006G036400 Sobic010G086800--Sobic009G226900 Sobic010G086800--Sobic003G427900 Sobic002G072200 Sobic002G072200 Sobic010G086800--Sobic002G072200 Sobic001G107100 Sobic001G107100 Sobic010G086800--Sobic001G107100 Sobic009G162500 Sobic009G162500 Sobic010G086800--Sobic009G162500 Sobic002G205500 Sobic002G205500 Sobic003G296400--Sobic002G205500 Sobic001G224300 Sobic001G224300 Sobic003G296400--Sobic001G224300 Sobic003G296400--Sobic006G036400 Sobic007G223600 Sobic007G223600 Sobic003G296400--Sobic007G223600 Sobic006G226200 Sobic006G226200 Sobic003G296400--Sobic006G226200 Sobic003G296400--Sobic009G226900 Sobic009G048000 Sobic009G048000 Sobic003G296400--Sobic009G048000 Sobic004G221300 Sobic004G221300 Sobic003G296400--Sobic004G221300 Sobic003G236701 Sobic003G236701 Sobic003G296400--Sobic003G236701 Sobic006G066500--Sobic003G236701 Sobic001G422300 Sobic001G422300 Sobic006G066500--Sobic001G422300 Sobic006G066500--Sobic006G226200 Sobic003G112200 Sobic003G112200 Sobic006G066500--Sobic003G112200 Sobic004G125400 Sobic004G125400 Sobic006G066500--Sobic004G125400 Sobic001G238600 Sobic001G238600 Sobic006G066500--Sobic001G238600 Sobic003G231500 Sobic003G231500 Sobic006G066500--Sobic003G231500 Sobic003G220000 Sobic003G220000 Sobic006G066500--Sobic003G220000 Sobic008G010400 Sobic008G010400 Sobic006G066500--Sobic008G010400 Sobic009G226900--Sobic003G062000 Sobic009G226900--Sobic001G224300 Sobic009G226900--Sobic003G296400 Sobic009G226900--Sobic002G205500 Sobic003G387500 Sobic003G387500 Sobic009G226900--Sobic003G387500 Sobic009G226900--Sobic006G036400 Sobic001G406700 Sobic001G406700 Sobic009G226900--Sobic001G406700 Sobic005G087200 Sobic005G087200 Sobic009G226900--Sobic005G087200 Sobic006G075000 Sobic006G075000 Sobic009G226900--Sobic006G075000 Sobic001G468300--Sobic003G236701 Sobic001G468300--Sobic009G048000 Sobic001G468300--Sobic006G066500 Sobic010G199700 Sobic010G199700 Sobic001G468300--Sobic010G199700 Sobic001G468300--Sobic009G241600 Sobic002G332300 Sobic002G332300 Sobic001G468300--Sobic002G332300 Sobic001G468300--Sobic003G112200 Sobic001G468300--Sobic006G226200 Sobic001G468300--Sobic008G059800 Sobic006G036400--Sobic001G224300 Sobic006G036400--Sobic003G296400 Sobic006G036400--Sobic003G062000 Sobic006G036400--Sobic002G205500 Sobic001G409100 Sobic001G409100 Sobic006G036400--Sobic001G409100 Sobic009G034300 Sobic009G034300 Sobic006G036400--Sobic009G034300 Sobic006G036400--Sobic009G226900 Sobic001G360800 Sobic001G360800 Sobic006G036400--Sobic001G360800 Sobic006G036400--Sobic004G221300 Sobic003G386200--Sobic006G036400 Sobic003G386200--Sobic009G226900 Sobic003G386200--Sobic003G296400 Sobic003G386200--Sobic003G062000 Sobic003G386200--Sobic003G427900 Sobic003G386200--Sobic009G162500 Sobic003G386200--Sobic002G205500 Sobic003G386200--Sobic001G224300 Sobic001G534532 Sobic001G534532 Sobic003G386200--Sobic001G534532 Sobic003G062000--Sobic009G226900 Sobic003G062000--Sobic006G036400 Sobic003G062000--Sobic010G086800 Sobic003G062000--Sobic001G224300 Sobic003G062000--Sobic003G296400 Sobic003G062000--Sobic002G072200 Sobic003G062000--Sobic006G075000 Sobic003G062000--Sobic009G032600 Sobic003G062000--Sobic003G386200
Octagon: transcription factors


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